Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_C21
         (798 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0188 + 32212297-32212746                                         29   5.7  
01_06_0782 + 31969677-31969767,31969863-31969960,31970059-319702...    28   9.9  

>03_06_0188 + 32212297-32212746
          Length = 149

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -3

Query: 610 GPGDPLVPSAPGRSILVGPGGP 545
           GPG P++P  PG  + VGPG P
Sbjct: 58  GPGIPVIPGVPGVPV-VGPGIP 78


>01_06_0782 +
           31969677-31969767,31969863-31969960,31970059-31970235,
           31970367-31970467,31970626-31970701,31970827-31970886,
           31970979-31971215,31971612-31971686,31971981-31972039,
           31972110-31972201,31972463-31972623,31972964-31973176
          Length = 479

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +2

Query: 140 FLKSTQYRE*KELSSIFLLNLFSYFCCLTLRWIY 241
           F+  +QY +  ++  I +L  FS F C+ L W Y
Sbjct: 196 FVVLSQYLKNVQIRDIPILERFSLFICIALVWAY 229


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,423,152
Number of Sequences: 37544
Number of extensions: 421340
Number of successful extensions: 1055
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1055
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)