Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_C21
         (798 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    28   0.38 
AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulf...    25   2.7  
AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulf...    25   2.7  
AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reduct...    25   2.7  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   3.6  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   8.3  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 27.9 bits (59), Expect = 0.38
 Identities = 14/27 (51%), Positives = 14/27 (51%)
 Frame = +3

Query: 531 LSALVGPPGPTSIDRPGADGTSGSPGP 611
           L  L G  GP    RPG DG  G PGP
Sbjct: 762 LQGLRGDVGPEG--RPGRDGAPGLPGP 786



 Score = 26.6 bits (56), Expect = 0.89
 Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = +3

Query: 546 GPPG-PTSIDRPGADGTSGSPGP 611
           G PG P S+  PG  G  G+PGP
Sbjct: 128 GDPGLPGSLGYPGEKGDLGTPGP 150



 Score = 26.6 bits (56), Expect = 0.89
 Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
 Frame = +3

Query: 546 GPPG-PTSIDRPGADGTSGSPG 608
           GP G P +  RPG DG  G PG
Sbjct: 167 GPAGHPGAPGRPGVDGVKGLPG 188



 Score = 25.4 bits (53), Expect = 2.0
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = +3

Query: 534 SALVGPPGPTSIDRPGADGTSGSPG 608
           S  VGPPG      PG DG  G+PG
Sbjct: 68  SGPVGPPGA-----PGRDGMPGAPG 87



 Score = 25.0 bits (52), Expect = 2.7
 Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
 Frame = +3

Query: 546 GPPGPTSIDRPGAD-GTSGSPGPY*YTRAP 632
           GPPGP   + P  D G  G  GP     AP
Sbjct: 716 GPPGPPGFNGPKGDKGLPGLAGPAGIPGAP 745


>AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 529

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -3

Query: 592 VPSAPGRSILVGPG 551
           +P APGR++LVG G
Sbjct: 213 LPQAPGRTLLVGAG 226


>AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 505

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -3

Query: 592 VPSAPGRSILVGPG 551
           +P APGR++LVG G
Sbjct: 189 LPQAPGRTLLVGAG 202


>AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reductase
           protein.
          Length = 502

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -3

Query: 592 VPSAPGRSILVGPG 551
           +P APGR++LVG G
Sbjct: 186 LPQAPGRTLLVGAG 199


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +3

Query: 558 PTSIDRPGADGTSGSPGP 611
           P S   PG  GT G PGP
Sbjct: 123 PGSEGLPGEKGTKGEPGP 140



 Score = 24.2 bits (50), Expect = 4.7
 Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
 Frame = +3

Query: 540 LVGPPGPTSIDR-PGADGTSGSPGPY*YTRAP 632
           L G  G    D  PG  G  G+PGP  Y   P
Sbjct: 176 LAGRDGCNGTDGLPGLSGLPGNPGPRGYAGIP 207



 Score = 24.2 bits (50), Expect = 4.7
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 540 LVGPPGPTSIDRPGADGTSGSPG 608
           ++G PG     RPGA G  G  G
Sbjct: 531 VMGTPGDAKEGRPGAPGLPGRDG 553



 Score = 23.8 bits (49), Expect = 6.3
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = +3

Query: 531 LSALVGPPGPTSIDRPGADGTSGSPG 608
           L  L G  GP     PG DG  G PG
Sbjct: 372 LHGLKGQSGPKG--EPGRDGIPGQPG 395


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 528  ALSALVGPPGPTSIDRPGA 584
            +LS+  G  GP S D+PGA
Sbjct: 1362 SLSSASGSIGPKSADQPGA 1380


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 759,449
Number of Sequences: 2352
Number of extensions: 15435
Number of successful extensions: 36
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83992206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)