Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_C21
(798 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71178-2|CAA94875.1| 297|Caenorhabditis elegans Hypothetical pr... 36 0.034
U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter... 36 0.034
M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein ( C.ele... 36 0.034
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 35 0.078
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 33 0.18
U50312-9|AAA92325.1| 294|Caenorhabditis elegans Collagen protei... 33 0.18
U50312-8|AAA92324.1| 294|Caenorhabditis elegans Collagen protei... 33 0.18
U50312-7|AAA92323.2| 306|Caenorhabditis elegans Collagen protei... 33 0.18
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 33 0.18
L11247-3|AAA28008.1| 278|Caenorhabditis elegans Collagen protei... 33 0.18
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 33 0.18
Z93388-12|CAB07661.2| 294|Caenorhabditis elegans Hypothetical p... 33 0.24
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 32 0.41
Z68320-1|CAB63328.2| 278|Caenorhabditis elegans Hypothetical pr... 32 0.55
Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical pr... 31 0.72
Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical pr... 31 0.72
Z71177-3|CAA94869.1| 325|Caenorhabditis elegans Hypothetical pr... 31 0.72
Z70208-1|CAA94141.1| 339|Caenorhabditis elegans Hypothetical pr... 31 0.72
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 31 0.72
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 31 0.72
Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z81050-3|CAB02849.1| 291|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z54237-5|CAN86900.1| 273|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z54237-4|CAN86899.1| 297|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 31 0.96
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 31 0.96
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 31 0.96
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 31 0.96
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 31 0.96
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 31 0.96
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 31 0.96
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 31 0.96
AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical... 31 0.96
AL021448-3|CAA16275.1| 291|Caenorhabditis elegans Hypothetical ... 31 0.96
AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen pro... 31 0.96
Z75527-5|CAA99776.1| 340|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z73425-5|CAA97787.1| 427|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z71178-1|CAA94874.1| 297|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 31 1.3
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 31 1.3
U97403-7|AAB52475.2| 179|Caenorhabditis elegans Hypothetical pr... 31 1.3
J05067-1|AAB59179.1| 313|Caenorhabditis elegans clb-2 protein. 31 1.3
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical p... 30 1.7
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 30 1.7
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 30 1.7
U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helica... 30 1.7
M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein. 30 1.7
AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen pro... 30 1.7
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 30 1.7
AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen prot... 30 1.7
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 30 1.7
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical pr... 30 2.2
X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein. 30 2.2
X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein. 30 2.2
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 30 2.2
U39745-4|AAA80446.1| 325|Caenorhabditis elegans Collagen protei... 30 2.2
U14635-8|AAK84492.1| 307|Caenorhabditis elegans Collagen protei... 30 2.2
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 30 2.2
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 30 2.2
L15418-1|AAA17445.1| 307|Caenorhabditis elegans col-36 collagen... 30 2.2
AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen prot... 30 2.2
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 30 2.2
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 29 2.9
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 29 2.9
AF040660-2|AAC71147.1| 302|Caenorhabditis elegans Collagen prot... 29 2.9
Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z70307-3|CAA94329.1| 308|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z68113-3|CAA92150.1| 333|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 29 3.9
U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protei... 29 3.9
U21308-11|AAB93312.3| 265|Caenorhabditis elegans Roller: helica... 29 3.9
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 29 3.9
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 29 3.9
AF047652-2|AAC04393.3| 256|Caenorhabditis elegans Collagen prot... 29 3.9
AF047652-1|AAO44912.1| 294|Caenorhabditis elegans Collagen prot... 29 3.9
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 29 3.9
Z74037-4|CAA98490.1| 295|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z68507-1|CAA92826.1| 337|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z49938-3|CAA90188.1| 306|Caenorhabditis elegans Hypothetical pr... 29 5.1
X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein. 29 5.1
U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protei... 29 5.1
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 29 5.1
U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter... 29 5.1
AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-l... 29 5.1
AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-l... 29 5.1
AL034543-4|CAA22518.1| 323|Caenorhabditis elegans Hypothetical ... 29 5.1
AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen prot... 29 5.1
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 29 5.1
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z71262-8|CAA95812.1| 302|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z70682-4|CAA94581.1| 299|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z49907-2|CAA90084.1| 324|Caenorhabditis elegans Hypothetical pr... 28 6.7
U50191-3|AAK31557.1| 380|Caenorhabditis elegans Dumpy : shorter... 28 6.7
U40937-1|AAA81693.1| 396|Caenorhabditis elegans Collagen protei... 28 6.7
L12706-1|AAA17398.2| 360|Caenorhabditis elegans collagen protein. 28 6.7
J03146-1|AAA65468.1| 324|Caenorhabditis elegans collagen protein. 28 6.7
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 28 6.7
AC024778-1|AAF60567.1| 393|Caenorhabditis elegans Collagen prot... 28 6.7
Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z49938-2|CAA90187.1| 306|Caenorhabditis elegans Hypothetical pr... 28 8.9
U53344-2|AAP13769.1| 301|Caenorhabditis elegans Collagen protei... 28 8.9
U53344-1|AAA96223.1| 363|Caenorhabditis elegans Collagen protei... 28 8.9
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 28 8.9
AF039720-3|AAB96697.1| 281|Caenorhabditis elegans Collagen prot... 28 8.9
AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen pro... 28 8.9
>Z71178-2|CAA94875.1| 297|Caenorhabditis elegans Hypothetical
protein B0024.2 protein.
Length = 297
Score = 35.9 bits (79), Expect = 0.034
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
GPPGP RPG GTSGSPGP
Sbjct: 106 GPPGPPG--RPGQRGTSGSPGP 125
>U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 13 protein.
Length = 302
Score = 35.9 bits (79), Expect = 0.034
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +3
Query: 543 VGPPGPTSIDRPGADGTSGSPGP 611
VGPPGP+ +PG DGT G PGP
Sbjct: 230 VGPPGPSG--QPGNDGTPGQPGP 250
Score = 34.3 bits (75), Expect = 0.10
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
GPPGP +PGADG G PGP
Sbjct: 252 GPPGPDG--KPGADGNPGQPGP 271
>M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein (
C.elegans collagen (dpy-13) gene, complete cds. ).
Length = 302
Score = 35.9 bits (79), Expect = 0.034
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +3
Query: 543 VGPPGPTSIDRPGADGTSGSPGP 611
VGPPGP+ +PG DGT G PGP
Sbjct: 230 VGPPGPSG--QPGNDGTPGQPGP 250
Score = 34.3 bits (75), Expect = 0.10
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
GPPGP +PGADG G PGP
Sbjct: 252 GPPGPDG--KPGADGNPGQPGP 271
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 34.7 bits (76), Expect = 0.078
Identities = 15/23 (65%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +3
Query: 546 GPPGPTSID-RPGADGTSGSPGP 611
GPPGP D RPGA G G+PGP
Sbjct: 114 GPPGPPGRDGRPGAPGRPGNPGP 136
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 33.5 bits (73), Expect = 0.18
Identities = 14/23 (60%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +3
Query: 546 GPPGPTSID-RPGADGTSGSPGP 611
GP GP D +PGADG G+PGP
Sbjct: 246 GPKGPNGPDGQPGADGNPGAPGP 268
Score = 31.9 bits (69), Expect = 0.55
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
GPPG S +PGADG+ G PGP
Sbjct: 228 GPPG--SPGQPGADGSPGQPGP 247
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPG 608
GPPGP PGA GT G PG
Sbjct: 187 GPPGPPGA--PGAPGTPGEPG 205
>U50312-9|AAA92325.1| 294|Caenorhabditis elegans Collagen protein
10 protein.
Length = 294
Score = 33.5 bits (73), Expect = 0.18
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
GPPGP +PGA GT G+PGP
Sbjct: 104 GPPGPPG--QPGAPGTPGAPGP 123
>U50312-8|AAA92324.1| 294|Caenorhabditis elegans Collagen protein
145 protein.
Length = 294
Score = 33.5 bits (73), Expect = 0.18
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
GPPGP +PGA GT G+PGP
Sbjct: 104 GPPGPPG--QPGAPGTPGAPGP 123
>U50312-7|AAA92323.2| 306|Caenorhabditis elegans Collagen protein
144 protein.
Length = 306
Score = 33.5 bits (73), Expect = 0.18
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
GPPGP +PGA GT G+PGP
Sbjct: 116 GPPGPPG--QPGAPGTPGAPGP 135
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 33.5 bits (73), Expect = 0.18
Identities = 14/23 (60%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +3
Query: 546 GPPGPTSID-RPGADGTSGSPGP 611
GP GP D +PGADG G+PGP
Sbjct: 245 GPKGPNGPDGQPGADGNPGAPGP 267
Score = 31.9 bits (69), Expect = 0.55
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
GPPG S +PGADG+ G PGP
Sbjct: 227 GPPG--SPGQPGADGSPGQPGP 246
>L11247-3|AAA28008.1| 278|Caenorhabditis elegans Collagen protein
91 protein.
Length = 278
Score = 33.5 bits (73), Expect = 0.18
Identities = 14/23 (60%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +3
Query: 546 GPPGPTSID-RPGADGTSGSPGP 611
G PGP D +PGADG G+PGP
Sbjct: 146 GAPGPAGPDGQPGADGQGGAPGP 168
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +3
Query: 546 GPPGPTSID-RPGADGTSGSPGP 611
GP GP D +PG+ G G+PGP
Sbjct: 211 GPQGPVGSDGQPGSAGAPGAPGP 233
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 33.5 bits (73), Expect = 0.18
Identities = 14/23 (60%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +3
Query: 546 GPPGPTSID-RPGADGTSGSPGP 611
GP GP D +PGADG G+PGP
Sbjct: 246 GPKGPNGPDGQPGADGNPGAPGP 268
Score = 31.9 bits (69), Expect = 0.55
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
GPPG S +PGADG+ G PGP
Sbjct: 228 GPPG--SPGQPGADGSPGQPGP 247
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPG 608
GPPGP PGA GT G PG
Sbjct: 187 GPPGPPGA--PGAPGTPGEPG 205
>Z93388-12|CAB07661.2| 294|Caenorhabditis elegans Hypothetical
protein T10C6.4 protein.
Length = 294
Score = 33.1 bits (72), Expect = 0.24
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = -1
Query: 462 ISIFFFFVGIALHRVVVVITTGASGQLHNT--PSLLSFHFTYLNSHNLPRSIII-YNKNY 292
I+ FFFFVGI L+ +++V + G + T P +L HF + S+ Y K +
Sbjct: 49 ITFFFFFVGIFLNTILIVSNSAIFGNISLTILPIMLGTHFLMAFNRFCASSMPFGYRKIF 108
Query: 291 SK 286
SK
Sbjct: 109 SK 110
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 32.3 bits (70), Expect = 0.41
Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +3
Query: 534 SALVGPPGPTSIDRP-GADGTSGSPG 608
+AL GPPGP P GADG G+PG
Sbjct: 215 NALPGPPGPPGPQGPPGADGLPGNPG 240
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +3
Query: 546 GPPGPTSID-RPGADGTSGSPGP 611
GPPG ID PG G+ G PGP
Sbjct: 285 GPPGDPGIDGAPGNPGSPGEPGP 307
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 4/26 (15%)
Frame = +3
Query: 543 VGPPGPTSID----RPGADGTSGSPG 608
VGPPGP+ PG DG+ G+PG
Sbjct: 140 VGPPGPSGAPGTDGNPGNDGSPGNPG 165
>Z68320-1|CAB63328.2| 278|Caenorhabditis elegans Hypothetical
protein W07A12.5 protein.
Length = 278
Score = 31.9 bits (69), Expect = 0.55
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3
Query: 528 ALSALVGPPGPTSIDRPGADGTSGSPGP 611
+L VGPPGP PG DG+ G+PGP
Sbjct: 167 SLPGPVGPPGP-----PGKDGSIGAPGP 189
>Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical
protein F54D1.3 protein.
Length = 310
Score = 31.5 bits (68), Expect = 0.72
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
GPPGP +PGA G G+PGP
Sbjct: 120 GPPGPPG--QPGAPGVPGAPGP 139
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +3
Query: 546 GPPGPTSIDR-PGADGTSGSPGP 611
GP GP+ D PG DG GS GP
Sbjct: 243 GPAGPSGQDGFPGQDGAPGSAGP 265
>Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical
protein F54D1.2 protein.
Length = 294
Score = 31.5 bits (68), Expect = 0.72
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
GPPGP +PGA G G+PGP
Sbjct: 104 GPPGPPG--QPGAPGVPGAPGP 123
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +3
Query: 546 GPPGPTSIDR-PGADGTSGSPGP 611
GP GP+ D PG DG GS GP
Sbjct: 227 GPAGPSGQDGFPGQDGAPGSAGP 249
>Z71177-3|CAA94869.1| 325|Caenorhabditis elegans Hypothetical
protein AC3.6 protein.
Length = 325
Score = 31.5 bits (68), Expect = 0.72
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +3
Query: 546 GPPGPTSID-RPGADGTSGSPGP-Y*YTRAPLXGRSQDQCTSRTTWTHYHTSSSVP 707
G PG +D PG G SG PGP Y + P G++ + +++Y+T +S P
Sbjct: 257 GQPGGPGVDGHPGRPGGSGRPGPDSGYCKCPQRGKTDE-------FSNYNTKASTP 305
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +3
Query: 546 GPPG-PTSIDRPGADGTSGSPG 608
GPPG P PG DG++G PG
Sbjct: 108 GPPGRPGHPGHPGEDGSAGQPG 129
>Z70208-1|CAA94141.1| 339|Caenorhabditis elegans Hypothetical
protein F54B11.1 protein.
Length = 339
Score = 31.5 bits (68), Expect = 0.72
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +3
Query: 540 LVGPPGPTSIDRPGADGTSGSPG 608
L GPPGP RPG+DG G PG
Sbjct: 286 LPGPPGPPG--RPGSDGNPGVPG 306
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Frame = +3
Query: 546 GPPGPTSID----RPGADGTSGSPGPY*YTRAPLXGRSQDQC 659
GPPGP+ RPG G G PG +P R+Q QC
Sbjct: 144 GPPGPSGHPGKPGRPGRPGGHGMPGMPGLGASPCQPRTQSQC 185
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 31.5 bits (68), Expect = 0.72
Identities = 15/26 (57%), Positives = 15/26 (57%), Gaps = 4/26 (15%)
Frame = +3
Query: 546 GPPGPTSIDRP----GADGTSGSPGP 611
GPPGP P GADG SG PGP
Sbjct: 240 GPPGPKGAPGPDGPPGADGQSGPPGP 265
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
GPPGP PG DG G PGP
Sbjct: 225 GPPGPPGA--PGNDGPPGPPGP 244
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 7/30 (23%)
Frame = +3
Query: 540 LVGPPGPTSID-------RPGADGTSGSPG 608
L GPPGP RPGA GT G+PG
Sbjct: 98 LPGPPGPAGAPGKPGKPGRPGAPGTPGTPG 127
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 31.5 bits (68), Expect = 0.72
Identities = 15/26 (57%), Positives = 15/26 (57%), Gaps = 4/26 (15%)
Frame = +3
Query: 546 GPPGPTSIDRP----GADGTSGSPGP 611
GPPGP P GADG SG PGP
Sbjct: 240 GPPGPKGAPGPDGPPGADGQSGPPGP 265
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
GPPGP PG DG G PGP
Sbjct: 225 GPPGPPGA--PGNDGPPGPPGP 244
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 7/30 (23%)
Frame = +3
Query: 540 LVGPPGPTSID-------RPGADGTSGSPG 608
L GPPGP RPGA GT G+PG
Sbjct: 98 LPGPPGPAGAPGKPGKPGRPGAPGTPGTPG 127
>Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.6 protein.
Length = 304
Score = 31.1 bits (67), Expect = 0.96
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 546 GPPGPT-SIDRPGADGTSGSPGPY*YTRAP 632
GPPGP S PG G +G+PGP + AP
Sbjct: 229 GPPGPAGSPGAPGGPGQAGAPGPKGPSGAP 258
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = +3
Query: 546 GPPGPTSID-RPGADGTSGSPG 608
GP GP+ +PGADG G+PG
Sbjct: 250 GPKGPSGAPGQPGADGNPGAPG 271
>Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.5 protein.
Length = 304
Score = 31.1 bits (67), Expect = 0.96
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 546 GPPGPT-SIDRPGADGTSGSPGPY*YTRAP 632
GPPGP S PG G +G+PGP + AP
Sbjct: 229 GPPGPAGSPGAPGGPGQAGAPGPKGPSGAP 258
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = +3
Query: 546 GPPGPTSID-RPGADGTSGSPG 608
GP GP+ +PGADG G+PG
Sbjct: 250 GPKGPSGAPGQPGADGNPGAPG 271
>Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.1 protein.
Length = 304
Score = 31.1 bits (67), Expect = 0.96
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 546 GPPGPT-SIDRPGADGTSGSPGPY*YTRAP 632
GPPGP S PG G +G+PGP + AP
Sbjct: 229 GPPGPAGSPGAPGGPGQAGAPGPKGPSGAP 258
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = +3
Query: 546 GPPGPTSID-RPGADGTSGSPG 608
GP GP+ +PGADG G+PG
Sbjct: 250 GPKGPSGAPGQPGADGNPGAPG 271
>Z81050-3|CAB02849.1| 291|Caenorhabditis elegans Hypothetical
protein C50B6.4 protein.
Length = 291
Score = 31.1 bits (67), Expect = 0.96
Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +3
Query: 546 GPPGPTSID-RPGADGTSGSPGP 611
G PGP D +PG DG G PGP
Sbjct: 145 GAPGPAGPDGQPGQDGQGGQPGP 167
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 31.1 bits (67), Expect = 0.96
Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +3
Query: 546 GPPGPTSIDRP-GADGTSGSPGP 611
GPPGP+ P G DG +G+PGP
Sbjct: 187 GPPGPSGPAGPAGNDGAAGTPGP 209
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
GPPGP A G +G PGP
Sbjct: 234 GPPGPDGASPTAAPGAAGPPGP 255
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
GPPGP PG DG G+ GP
Sbjct: 254 GPPGPAGA--PGPDGNPGTAGP 273
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 31.1 bits (67), Expect = 0.96
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = -3
Query: 607 PGDPLVPSAPGRSILVGPGGPTRADRAP 524
PG P PS PG + GP GP D AP
Sbjct: 173 PGSPAGPSGPGPAGPPGPAGPAGNDGAP 200
>Z54237-5|CAN86900.1| 273|Caenorhabditis elegans Hypothetical
protein T11B7.3b protein.
Length = 273
Score = 31.1 bits (67), Expect = 0.96
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Frame = +3
Query: 519 NIGALSALVGPPGPT----SIDRPGADGTSGSPG 608
+IG + GPPGP S+ + G DG SG+PG
Sbjct: 136 SIGCVQCPRGPPGPPGDVGSVGQRGPDGASGAPG 169
>Z54237-4|CAN86899.1| 297|Caenorhabditis elegans Hypothetical
protein T11B7.3a protein.
Length = 297
Score = 31.1 bits (67), Expect = 0.96
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Frame = +3
Query: 519 NIGALSALVGPPGPT----SIDRPGADGTSGSPG 608
+IG + GPPGP S+ + G DG SG+PG
Sbjct: 136 SIGCVQCPRGPPGPPGDVGSVGQRGPDGASGAPG 169
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 31.1 bits (67), Expect = 0.96
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 531 LSALVGPPGPTSIDRPGADGTSGSPGPY*Y 620
L + GPPG + PGA G G+PGP Y
Sbjct: 483 LPGVRGPPGDSLNGLPGAPGQRGAPGPNGY 512
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 31.1 bits (67), Expect = 0.96
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 531 LSALVGPPGPTSIDRPGADGTSGSPGPY*Y 620
L + GPPG + PGA G G+PGP Y
Sbjct: 482 LPGVRGPPGDSLNGLPGAPGQRGAPGPNGY 511
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 31.1 bits (67), Expect = 0.96
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = -3
Query: 607 PGDPLVPSAPGRSILVGPGGPTRADRAP 524
PG P PS PG + GP GP D AP
Sbjct: 173 PGSPAGPSGPGPAGPPGPAGPAGNDGAP 200
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 31.1 bits (67), Expect = 0.96
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 531 LSALVGPPGPTSIDRPGADGTSGSPGPY*Y 620
L + GPPG + PGA G G+PGP Y
Sbjct: 482 LPGVRGPPGDSLNGLPGAPGQRGAPGPNGY 511
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 31.1 bits (67), Expect = 0.96
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 531 LSALVGPPGPTSIDRPGADGTSGSPGPY*Y 620
L + GPPG + PGA G G+PGP Y
Sbjct: 483 LPGVRGPPGDSLNGLPGAPGQRGAPGPNGY 512
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 31.1 bits (67), Expect = 0.96
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 531 LSALVGPPGPTSIDRPGADGTSGSPGPY*Y 620
L + GPPG + PGA G G+PGP Y
Sbjct: 519 LPGVRGPPGDSLNGLPGAPGQRGAPGPNGY 548
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 31.1 bits (67), Expect = 0.96
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = -3
Query: 607 PGDPLVPSAPGRSILVGPGGPTRADRAP 524
PG P PS PG + GP GP D AP
Sbjct: 173 PGSPAGPSGPGPAGPPGPAGPAGNDGAP 200
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 31.1 bits (67), Expect = 0.96
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = -3
Query: 607 PGDPLVPSAPGRSILVGPGGPTRADRAP 524
PG P PS PG + GP GP D AP
Sbjct: 173 PGSPAGPSGPGPAGPPGPAGPAGNDGAP 200
>AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical
protein Y51H4A.9 protein.
Length = 351
Score = 31.1 bits (67), Expect = 0.96
Identities = 14/23 (60%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +3
Query: 543 VGPPGPTSID-RPGADGTSGSPG 608
VGPPG D PG DG+SG+PG
Sbjct: 165 VGPPGAPGQDGAPGNDGSSGAPG 187
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 4/29 (13%)
Frame = +3
Query: 534 SALVGPPGPTS----IDRPGADGTSGSPG 608
SAL GPPGP +PG++G G+PG
Sbjct: 237 SALPGPPGPAGSPGRSGQPGSNGNVGAPG 265
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = +3
Query: 543 VGPPGPTS--IDRPGADGTSGSPGP 611
VG PG +D PGA G +G PGP
Sbjct: 261 VGAPGAPGQVVDVPGAPGPAGPPGP 285
>AL021448-3|CAA16275.1| 291|Caenorhabditis elegans Hypothetical
protein Y2H9A.3 protein.
Length = 291
Score = 31.1 bits (67), Expect = 0.96
Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +3
Query: 546 GPPGPTSID-RPGADGTSGSPGP 611
G PGP D +PG DG G PGP
Sbjct: 145 GAPGPAGPDGQPGQDGQGGQPGP 167
>AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen
protein 99 protein.
Length = 627
Score = 31.1 bits (67), Expect = 0.96
Identities = 15/25 (60%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +3
Query: 537 ALVGPPGPTSID-RPGADGTSGSPG 608
ALVGPPGP D RPG G G G
Sbjct: 330 ALVGPPGPPGRDGRPGDKGEKGEQG 354
>Z75527-5|CAA99776.1| 340|Caenorhabditis elegans Hypothetical
protein C15C8.5 protein.
Length = 340
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +1
Query: 400 CSDDHDHSVKSDTDKEEENGNSEILT 477
C+ ++ H K++T EEEN N+EIL+
Sbjct: 134 CTSNYCHVTKTETFSEEENQNTEILS 159
>Z73425-5|CAA97787.1| 427|Caenorhabditis elegans Hypothetical
protein F12F6.9 protein.
Length = 427
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +3
Query: 525 GALSALVGPPGPTSIDRP-GADGTSGSPG 608
G + + GPPGP P G DG SG+PG
Sbjct: 209 GKRNYIYGPPGPMGQPGPSGLDGVSGNPG 237
>Z71178-1|CAA94874.1| 297|Caenorhabditis elegans Hypothetical
protein B0024.1 protein.
Length = 297
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Frame = +3
Query: 519 NIGALSALVGPPGPTS----IDRPGADGTSGSPG 608
N + GPPGP+ + RPG DG G PG
Sbjct: 144 NQDCIKCPAGPPGPSGTCGQVGRPGPDGRPGQPG 177
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical protein
K04H4.1b protein.
Length = 1502
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +3
Query: 534 SALVGPPGPTSIDRPGADGTSGSPGPY*YTRAPLXGRSQ 650
+ L GPPG PGA GT G PGP + P G Q
Sbjct: 1210 NGLSGPPGKAGY--PGAPGTDGYPGPPGLSGMPGHGGDQ 1246
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +3
Query: 534 SALVGPPGPTSIDRPGADGTSGSPGPY*YTRAPLXGRSQ 650
+ L GPPG PGA GT G PGP + P G Q
Sbjct: 1467 NGLSGPPGKAGY--PGAPGTDGYPGPPGLSGMPGHGGDQ 1503
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +3
Query: 534 SALVGPPGPTSIDRPGADGTSGSPGPY*YTRAPLXGRSQ 650
+ L GPPG PGA GT G PGP + P G Q
Sbjct: 1466 NGLSGPPGKAGY--PGAPGTDGYPGPPGLSGMPGHGGDQ 1502
>U97403-7|AAB52475.2| 179|Caenorhabditis elegans Hypothetical
protein T10E9.8 protein.
Length = 179
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = -1
Query: 348 TYLNSHNLPRSIIIYNKNYSKRSFRWIYTLQICQKL*IHRNVKQQK*LNKFSKNIEES 175
TYLN LP + NK YS W+Y IC + + N+ + LN++S + E S
Sbjct: 119 TYLNQ--LPGQFVNENKFYSVLGPFWMYLGAICLHITVAINMAFLQPLNEYSASFEVS 174
>J05067-1|AAB59179.1| 313|Caenorhabditis elegans clb-2 protein.
Length = 313
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +3
Query: 534 SALVGPPGPTSIDRPGADGTSGSPGPY*YTRAPLXGRSQ 650
+ L GPPG PGA GT G PGP + P G Q
Sbjct: 21 NGLSGPPGKAGY--PGAPGTDGYPGPPGLSGMPGHGGDQ 57
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/23 (56%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +3
Query: 546 GPPGPTSIDRP-GADGTSGSPGP 611
GPPGP P G DG +G+PGP
Sbjct: 188 GPPGPPGPAGPAGNDGAAGTPGP 210
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
GPPGP A G +G PGP
Sbjct: 235 GPPGPDGASPTAAPGAAGPPGP 256
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
GPPGP PG DG G+ GP
Sbjct: 255 GPPGPAGA--PGPDGNPGTAGP 274
>Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical
protein Y69H2.14 protein.
Length = 338
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/22 (59%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +3
Query: 546 GPPG-PTSIDRPGADGTSGSPG 608
GPPG P S +PG DG +G+PG
Sbjct: 153 GPPGFPGSDGQPGRDGEAGAPG 174
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
GPPGP +PG+DG G+ GP
Sbjct: 265 GPPGPAG--QPGSDGNPGTAGP 284
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPG 608
GPPGP RPG GT G PG
Sbjct: 120 GPPGPGG--RPGKPGTPGKPG 138
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPG 608
GPPGP PG DGT G PG
Sbjct: 168 GPPGP-----PGPDGTPGEPG 183
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
GP GP D G++G PGP
Sbjct: 242 GPAGPAGPDGQSGSGSAGGPGP 263
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGPY*YTRAPLXG 641
GPPGP D GA + G PGP+ + AP G
Sbjct: 300 GPPGP--FDPSGAQPSGGPPGPFNPSGAPPSG 329
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGPY*YTRAPLXG 641
GPPGP D GA + G PGP+ + AP G
Sbjct: 240 GPPGP--FDPSGAPPSGGPPGPFNPSGAPPSG 269
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGPY*YTRAPLXG 641
GPPGP D GA + G PGP+ + AP G
Sbjct: 270 GPPGP--FDPSGAPPSGGPPGPFDPSGAPPSG 299
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGPY*YTRAPLXG 641
GPPGP D GA + G PGP+ + AP G
Sbjct: 330 GPPGP--FDPSGAPPSGGPPGPFNPSGAPPSG 359
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGPY*YTRAPLXG 641
GPPGP D GA + G PGP+ + AP G
Sbjct: 360 GPPGP--FDPSGAPPSGGPPGPFDPSGAPPSG 389
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGPY*YTRAPLXG 641
GPPGP D GA + G PGP+ + AP G
Sbjct: 375 GPPGP--FDPSGAPPSGGPPGPFDPSGAPPSG 404
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGPY*YTRAPLXG 641
GPPGP D GA + G PGP+ + AP G
Sbjct: 390 GPPGP--FDPSGAPPSGGPPGPFNPSGAPPSG 419
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGPY*YTRAPLXG 641
GPPGP D GA + G PGP+ + AP G
Sbjct: 480 GPPGP--FDPSGAPPSGGPPGPFNPSGAPPSG 509
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGPY*YTRAPLXG 641
GPPGP GA + G PGP+ + AP G
Sbjct: 180 GPPGP--FGPSGAPPSGGPPGPFNPSEAPPSG 209
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGPY*YTRAPLXG 641
GPPGP + GA + G PGP+ + AP G
Sbjct: 225 GPPGP--FNPSGAPPSGGPPGPFDPSGAPPSG 254
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGPY*YTRAPLXG 641
GPPGP + GA + G PGP+ + AP G
Sbjct: 255 GPPGP--FNPSGAPPSGGPPGPFDPSGAPPSG 284
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGPY 614
GPPGP D GA + G PGP+
Sbjct: 285 GPPGP--FDPSGAPPSGGPPGPF 305
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGPY*YTRAPLXG 641
GPPGP + GA + G PGP+ + AP G
Sbjct: 315 GPPGP--FNPSGAPPSGGPPGPFDPSGAPPSG 344
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGPY*YTRAPLXG 641
GPPGP + GA + G PGP+ + AP G
Sbjct: 345 GPPGP--FNPSGAPPSGGPPGPFDPSGAPPSG 374
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGPY*YTRAPLXG 641
GPPGP + GA + G PGP+ + AP G
Sbjct: 405 GPPGP--FNPSGAPPSGGPPGPFNPSGAPPSG 434
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGPY*YTRAPLXG 641
GPPGP + GA + G PGP+ + AP G
Sbjct: 420 GPPGP--FNPSGAPPSGGPPGPFNPSGAPPSG 449
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGPY*YTRAPLXG 641
GPPGP + GA + G PGP+ + AP G
Sbjct: 435 GPPGP--FNPSGAPPSGGPPGPFNPSGAPPSG 464
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGPY*YTRAPLXG 641
GPPGP + GA + G PGP+ + AP G
Sbjct: 450 GPPGP--FNPSGAPPSGGPPGPFNPSGAPPSG 479
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGPY*YTRAPLXG 641
GPPGP + GA + G PGP+ + AP G
Sbjct: 465 GPPGP--FNPSGAPPSGGPPGPFDPSGAPPSG 494
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGPY*YTRAPLXG 641
GPPGP + GA + G PGP+ + AP G
Sbjct: 495 GPPGP--FNPSGAPPSGGPPGPFDPSGAPPSG 524
>U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 8, isoform a
protein.
Length = 329
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 540 LVGPPGPTSIDRPGADGTSGSPG 608
+ G PGP I RPG DG G+PG
Sbjct: 223 MAGQPGP--IGRPGRDGMKGAPG 243
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/25 (56%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = +3
Query: 543 VGPPGPTSIDRPGADGTS--GSPGP 611
+GPPGP PG DG S G PGP
Sbjct: 264 IGPPGPKG--NPGPDGQSYQGPPGP 286
>M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein.
Length = 329
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 540 LVGPPGPTSIDRPGADGTSGSPG 608
+ G PGP I RPG DG G+PG
Sbjct: 223 MAGQPGP--IGRPGRDGMKGAPG 243
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/25 (56%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = +3
Query: 543 VGPPGPTSIDRPGADGTS--GSPGP 611
+GPPGP PG DG S G PGP
Sbjct: 264 IGPPGPKG--NPGPDGQSYQGPPGP 286
>AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen
protein 116 protein.
Length = 313
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/51 (35%), Positives = 21/51 (41%)
Frame = +3
Query: 519 NIGALSALVGPPGPTSIDRPGADGTSGSPGPY*YTRAPLXGRSQDQCTSRT 671
N L GP GP +PG GT G+PG + P QC RT
Sbjct: 245 NTEGAPGLDGPLGPPG--KPGTPGTDGAPGVFGDDGVPGQDAQYCQCPPRT 293
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = +3
Query: 549 PPGPTSI-DRPGADGTSGSPG 608
PPGP I PG DGT G PG
Sbjct: 108 PPGPPGIFGPPGEDGTPGEPG 128
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/23 (56%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +3
Query: 546 GPPGPTS-IDRPGADGTSGSPGP 611
GPPGP +PG G +GSPGP
Sbjct: 211 GPPGPAGGPGQPGHSGGAGSPGP 233
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +3
Query: 519 NIGALS--ALVGPPGPTSIDRPGADGTSGSPG 608
N GA S GPPGP +PGA G G PG
Sbjct: 81 NCGAQSRGCPAGPPGPPG--QPGAPGEQGHPG 110
>AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen protein
45 protein.
Length = 327
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 4/27 (14%)
Frame = +3
Query: 546 GPPGPTSID----RPGADGTSGSPGPY 614
GPPGP D GA G G+PGPY
Sbjct: 268 GPPGPRGKDGAGGEKGAPGDQGNPGPY 294
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/22 (59%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +3
Query: 546 GPPGPTSID-RPGADGTSGSPG 608
GPPGP D +PGA G G PG
Sbjct: 217 GPPGPPGNDGQPGAPGQDGQPG 238
Score = 29.9 bits (64), Expect = 2.2
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
G PG +++ PG G +G PGP
Sbjct: 238 GAPGTNTVNSPGGPGPAGPPGP 259
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = +3
Query: 546 GPPGPTSID-RPGADGTSGSPG 608
GPPGP D +PG G G PG
Sbjct: 278 GPPGPPGNDGQPGGPGQPGGPG 299
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
GPPGP D G G PGP
Sbjct: 258 GPPGPPGQDGSGGAAQPGPPGP 279
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPG 608
GP GP PGADG +GSPG
Sbjct: 116 GPAGPAG--NPGADGDAGSPG 134
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
G PG SI PG G +G PGP
Sbjct: 161 GSPGTRSISSPGPAGPAGPPGP 182
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/22 (59%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = +3
Query: 546 GPPGPT-SIDRPGADGTSGSPG 608
GPPGP + PG DG +GSPG
Sbjct: 143 GPPGPDGNPGAPGNDGEAGSPG 164
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = +3
Query: 546 GPPGPTSID-RPGADGTSGSPG 608
GPPG ID PGA G G PG
Sbjct: 221 GPPGSNGIDGAPGAPGAKGEPG 242
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +3
Query: 546 GPPGPTSID-RPGADGTSGSPG 608
GP GP D PG DG +G+PG
Sbjct: 128 GPAGPPGADGNPGTDGAAGNPG 149
>Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical
protein F57B1.4 protein.
Length = 317
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPG 608
GPPGP+ +PG++G +G+PG
Sbjct: 213 GPPGPSG--QPGSNGNAGAPG 231
>Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical
protein F57B1.3 protein.
Length = 313
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPG 608
GPPGP+ +PG++G +G+PG
Sbjct: 209 GPPGPSG--QPGSNGNAGAPG 227
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPG 608
GP GP PGADG +GSPG
Sbjct: 116 GPAGPAG--NPGADGDAGSPG 134
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
G PG SI PG G +G PGP
Sbjct: 161 GSPGTRSISSPGPAGPAGPPGP 182
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/22 (59%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = +3
Query: 546 GPPGPT-SIDRPGADGTSGSPG 608
GPPGP + PG DG +GSPG
Sbjct: 143 GPPGPDGNPGAPGNDGEAGSPG 164
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
GPPGP PG DG G PGP
Sbjct: 230 GPPGPPGA--PGNDGPPGPPGP 249
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 4/26 (15%)
Frame = +3
Query: 546 GPPGPTSIDRP----GADGTSGSPGP 611
GPPGP P G DG SG PGP
Sbjct: 245 GPPGPKGAPGPDGPPGVDGQSGPPGP 270
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 7/30 (23%)
Frame = +3
Query: 540 LVGPPGPTSID-------RPGADGTSGSPG 608
L GPPGP RPGA GT G+PG
Sbjct: 103 LPGPPGPAGAPGKPGKPGRPGAPGTPGTPG 132
>Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.2 protein.
Length = 316
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 4/29 (13%)
Frame = +3
Query: 534 SALVGPPGPTS----IDRPGADGTSGSPG 608
+AL GPPGP +PG++G +G+PG
Sbjct: 202 AALPGPPGPAGPPGPAGQPGSNGNAGAPG 230
>Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.1 protein.
Length = 316
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 4/29 (13%)
Frame = +3
Query: 534 SALVGPPGPTS----IDRPGADGTSGSPG 608
+AL GPPGP +PG++G +G+PG
Sbjct: 202 AALPGPPGPAGPPGPAGQPGSNGNAGAPG 230
>X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 4/29 (13%)
Frame = +3
Query: 534 SALVGPPGPTS----IDRPGADGTSGSPG 608
+AL GPPGP +PG++G +G+PG
Sbjct: 202 AALPGPPGPAGPPGPAGQPGSNGNAGAPG 230
>X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 4/29 (13%)
Frame = +3
Query: 534 SALVGPPGPTS----IDRPGADGTSGSPG 608
+AL GPPGP +PG++G +G+PG
Sbjct: 202 AALPGPPGPAGPPGPAGQPGSNGNAGAPG 230
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/22 (59%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +3
Query: 546 GPPGPTSID-RPGADGTSGSPG 608
GPPGP R GADG G+PG
Sbjct: 156 GPPGPAGDGGRDGADGVDGTPG 177
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
GP GP I PGA G G PGP
Sbjct: 237 GPRGPPGI--PGAPGQPGRPGP 256
>U39745-4|AAA80446.1| 325|Caenorhabditis elegans Collagen protein
173 protein.
Length = 325
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +3
Query: 546 GPPGPTSIDRP-GADGTSGSPGP 611
GPPGP D P G +G SG GP
Sbjct: 254 GPPGPAGPDGPQGPEGRSGKQGP 276
>U14635-8|AAK84492.1| 307|Caenorhabditis elegans Collagen protein
36 protein.
Length = 307
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +3
Query: 540 LVGPPGPTS-IDRPGADGTSGSPG 608
++GPPGP + PG G +G PG
Sbjct: 201 MIGPPGPPGGVGEPGPPGPAGQPG 224
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/22 (59%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +3
Query: 546 GPPGPTSID-RPGADGTSGSPG 608
GPPGP R GADG G+PG
Sbjct: 137 GPPGPAGDGGRDGADGVDGTPG 158
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
GP GP I PGA G G PGP
Sbjct: 218 GPRGPPGI--PGAPGQPGRPGP 237
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = +3
Query: 546 GPPGPTSID-RPGADGTSGSPG 608
GPPGP PG DG G+PG
Sbjct: 201 GPPGPPGTSGNPGTDGAPGNPG 222
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = +3
Query: 546 GPPGPTSIDRP-GADGTSGSPGPY*YTRAPLXGRSQDQCTSRTTWTHY 686
GP GP P GA G +G+PG AP G D C T Y
Sbjct: 261 GPAGPAGDAGPDGAPGNAGAPGAPGEAGAPGSGGGCDHCPPPRTAPGY 308
>L15418-1|AAA17445.1| 307|Caenorhabditis elegans col-36 collagen
protein.
Length = 307
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +3
Query: 540 LVGPPGPTS-IDRPGADGTSGSPG 608
++GPPGP + PG G +G PG
Sbjct: 201 MIGPPGPPGGVGEPGPPGPAGQPG 224
>AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen protein
101 protein.
Length = 314
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPG 608
GPPGP+ +PG++G +G+PG
Sbjct: 210 GPPGPSG--QPGSNGNAGAPG 228
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPG 608
GPPGP PG DG G+PG
Sbjct: 214 GPPGPAG--NPGTDGAPGNPG 232
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +3
Query: 546 GPPGPTSIDRP-GADGTSGSPGPY*YTRAPLXGRSQDQC 659
GP GP P GA G +G+PG AP G D C
Sbjct: 271 GPAGPAGDAGPDGAPGNAGAPGAPGEAGAPGSGGGCDHC 309
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +3
Query: 525 GALSALVGPPGPTSID-RPGADGTSGSPGPY*YTRAPLXGRSQDQCTSRTTWTHYHTSSS 701
G+ GPPGP + +PG G G PG AP + C +R+ H + +
Sbjct: 225 GSTPGPAGPPGPPGPNGQPGHPGQDGQPGAPGNDGAPGSDAAYCPCPARSAAVFRHRNVA 284
Query: 702 V 704
V
Sbjct: 285 V 285
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
GPPGP PG G++G PGP
Sbjct: 104 GPPGPPG--EPGQPGSAGPPGP 123
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +3
Query: 546 GPPGPTSID-RPGADGTSGSPGP 611
GP GP D +PGA G +G GP
Sbjct: 159 GPAGPAGSDGQPGAPGDAGKDGP 181
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
GPPGP+ PGA G G PGP
Sbjct: 234 GPPGPSGA--PGAPGGPGYPGP 253
>AF040660-2|AAC71147.1| 302|Caenorhabditis elegans Collagen protein
88 protein.
Length = 302
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPG 608
GP GP PGADG +GSPG
Sbjct: 148 GPDGPAGA--PGADGQAGSPG 166
>Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical
protein C15A11.1 protein.
Length = 303
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
G G TS + PG+ G +G PGP
Sbjct: 172 GAAGTTSTNEPGSPGPAGPPGP 193
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPG 608
GPPGP +PGA G +G PG
Sbjct: 154 GPPGPDG--QPGAPGPNGQPG 172
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPG 608
GPPGP PG DG +G+PG
Sbjct: 209 GPPGPPG--PPGKDGEAGAPG 227
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
GP GP PG DG G+PGP
Sbjct: 148 GPAGPAG--PPGPDGQPGAPGP 167
>Z70307-3|CAA94329.1| 308|Caenorhabditis elegans Hypothetical
protein C39E9.3 protein.
Length = 308
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
GP GP + PG DG G PGP
Sbjct: 112 GPSGPKGL--PGQDGAPGEPGP 131
>Z68113-3|CAA92150.1| 333|Caenorhabditis elegans Hypothetical
protein E03G2.4 protein.
Length = 333
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/22 (59%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = +3
Query: 546 GPPG-PTSIDRPGADGTSGSPG 608
GPPG P S PG+DG +G PG
Sbjct: 147 GPPGRPGSDGSPGSDGEAGIPG 168
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 549 PPGPTSIDRPGADGTSGSPG 608
PPGP RPG+DG+ GS G
Sbjct: 145 PPGPPG--RPGSDGSPGSDG 162
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 607 PGDPLVPSAPGRSILVGPGGPTRADRAP 524
P +P+ P APG + GP GP A P
Sbjct: 209 PSEPITPGAPGPAGPAGPQGPPGAPGQP 236
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
GPPG +PG DG G+PGP
Sbjct: 228 GPPGAPG--QPGHDGQPGAPGP 247
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 607 PGDPLVPSAPGRSILVGPGGPTRADRAP 524
P +P+ P APG + GP GP A P
Sbjct: 209 PSEPITPGAPGPAGPAGPQGPPGAPGQP 236
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
GPPG +PG DG G+PGP
Sbjct: 228 GPPGAPG--QPGHDGQPGAPGP 247
>U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protein
73 protein.
Length = 285
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPG 608
GPPGP PG DG G+PG
Sbjct: 238 GPPGPQG--EPGQDGAPGNPG 256
>U21308-11|AAB93312.3| 265|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 8, isoform b
protein.
Length = 265
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +3
Query: 522 IGALSALVGPPGPTSIDRPGADGTS--GSPGP 611
+GA+ +GPPGP PG DG S G PGP
Sbjct: 194 MGAIGP-IGPPGPKG--NPGPDGQSYQGPPGP 222
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 607 PGDPLVPSAPGRSILVGPGGPTRADRAP 524
P +P+ P APG + GP GP A P
Sbjct: 209 PSEPITPGAPGPAGPAGPQGPPGAPGQP 236
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
GPPG +PG DG G+PGP
Sbjct: 228 GPPGAPG--QPGHDGQPGAPGP 247
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 607 PGDPLVPSAPGRSILVGPGGPTRADRAP 524
P +P+ P APG + GP GP A P
Sbjct: 209 PSEPITPGAPGPAGPAGPQGPPGAPGQP 236
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
GPPG +PG DG G+PGP
Sbjct: 228 GPPGAPG--QPGHDGQPGAPGP 247
>AF047652-2|AAC04393.3| 256|Caenorhabditis elegans Collagen protein
107, isoform a protein.
Length = 256
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 4/32 (12%)
Frame = +3
Query: 525 GALSALVGPPGPTSID----RPGADGTSGSPG 608
G + G PGP D PGADG G+PG
Sbjct: 130 GCIKCPAGEPGPAGPDGPAGAPGADGQPGAPG 161
>AF047652-1|AAO44912.1| 294|Caenorhabditis elegans Collagen protein
107, isoform b protein.
Length = 294
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 4/32 (12%)
Frame = +3
Query: 525 GALSALVGPPGPTSID----RPGADGTSGSPG 608
G + G PGP D PGADG G+PG
Sbjct: 130 GCIKCPAGEPGPAGPDGPAGAPGADGQPGAPG 161
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +3
Query: 525 GALSALVGPPGPTSIDRPGADGTSGSPGP 611
GA A GP GP PG DG G+PGP
Sbjct: 194 GAGYAEPGPAGPAG--PPGPDGQPGAPGP 220
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPG 608
GPPGP +PGA G G PG
Sbjct: 207 GPPGPDG--QPGAPGPDGQPG 225
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
G G TS ++PG G +G PGP
Sbjct: 225 GAGGTTSTNQPGPPGPAGPPGP 246
>Z74037-4|CAA98490.1| 295|Caenorhabditis elegans Hypothetical
protein F57B7.3 protein.
Length = 295
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPG 608
G PGP+ +PG DG SG PG
Sbjct: 150 GAPGPSG--QPGQDGASGQPG 168
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = +3
Query: 546 GPPGPTSID-RPGADGTSGSPG 608
G PGP D PGA G SG PG
Sbjct: 138 GAPGPQGPDGAPGAPGPSGQPG 159
>Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical
protein F15A2.1 protein.
Length = 291
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
GPPGP PG G +G PGP
Sbjct: 152 GPPGPDG--EPGVRGPNGPPGP 171
>Z68507-1|CAA92826.1| 337|Caenorhabditis elegans Hypothetical
protein M18.1 protein.
Length = 337
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
G PG S+ RPG T+GSPGP
Sbjct: 201 GAPGTRSVGRPG---TAGSPGP 219
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = +3
Query: 546 GPPGPTSID-RPGADGTSGSPG 608
GPPG D +PG DG G PG
Sbjct: 221 GPPGQNGNDGQPGNDGAPGQPG 242
>Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical
protein B0457.1b protein.
Length = 1012
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 317 VLLSTIKTIARGASGGYTPCR 255
VL+ T+ T+ + SGGY PCR
Sbjct: 709 VLVKTLCTVYQHTSGGYLPCR 729
>Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical
protein B0457.1a protein.
Length = 1014
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 317 VLLSTIKTIARGASGGYTPCR 255
VL+ T+ T+ + SGGY PCR
Sbjct: 711 VLVKTLCTVYQHTSGGYLPCR 731
>Z49938-3|CAA90188.1| 306|Caenorhabditis elegans Hypothetical
protein F38A3.2 protein.
Length = 306
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 519 NIGALSALVGPPGPTSID-RPGADGTSGSPG 608
N GA A G PGP D +PG+ G G+PG
Sbjct: 193 NAGAAGA-PGAPGPAGPDGQPGSTGQDGAPG 222
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPG 608
G PGP PGADG +G+PG
Sbjct: 235 GAPGPAGA--PGADGAAGAPG 253
>X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein.
Length = 318
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
GPPG SI G G G PGP
Sbjct: 201 GPPGDDSIGGTGIKGPPGPPGP 222
>U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protein
111 protein.
Length = 332
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +3
Query: 546 GPPGPTSID-RPGADGTSGSPG 608
GPPGP +D +PG G SG G
Sbjct: 105 GPPGPAGMDGKPGEPGASGPHG 126
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +3
Query: 546 GPPG-PTSIDRPGADGTSGSPGP 611
GPPG P + PG G GSPGP
Sbjct: 235 GPPGAPGNDGPPGPPGPKGSPGP 257
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 601 DPLVPSAPGRSILVGPGGPTRADRAP 524
+PL P APG + GP GP AP
Sbjct: 215 EPLTPGAPGEAGDAGPAGPPGPPGAP 240
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 4/26 (15%)
Frame = +3
Query: 546 GPPGPTSIDRP----GADGTSGSPGP 611
GPPGP P G DG +G PGP
Sbjct: 247 GPPGPKGSPGPDGPAGVDGQAGPPGP 272
>U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 7 protein.
Length = 318
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
GPPG SI G G G PGP
Sbjct: 201 GPPGDDSIGGTGIKGPPGPPGP 222
>AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-like
protein LAT-1B protein.
Length = 1012
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 317 VLLSTIKTIARGASGGYTPCR 255
VL+ T+ T+ + SGGY PCR
Sbjct: 709 VLVKTLCTVYQHTSGGYLPCR 729
>AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-like
protein LAT-1A protein.
Length = 1014
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 317 VLLSTIKTIARGASGGYTPCR 255
VL+ T+ T+ + SGGY PCR
Sbjct: 711 VLVKTLCTVYQHTSGGYLPCR 731
>AL034543-4|CAA22518.1| 323|Caenorhabditis elegans Hypothetical
protein Y81G3A.5 protein.
Length = 323
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 519 NIGALSALVGPPGPTS-IDRPGADGTSGSPG 608
++G S G PGP + PG +GT G+PG
Sbjct: 166 SLGESSLGAGSPGPPGGVGPPGPNGTPGAPG 196
>AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen protein
108 protein.
Length = 304
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 4/26 (15%)
Frame = +3
Query: 546 GPPGPT----SIDRPGADGTSGSPGP 611
GPPGP + +PG DG G+PGP
Sbjct: 227 GPPGPQGPPGAPGQPGHDGQPGTPGP 252
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +3
Query: 546 GPPG-PTSIDRPGADGTSGSPGP 611
GPPG P + PG G GSPGP
Sbjct: 235 GPPGAPGNDGPPGPPGPKGSPGP 257
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 601 DPLVPSAPGRSILVGPGGPTRADRAP 524
+PL P APG + GP GP AP
Sbjct: 215 EPLTPGAPGEAGDAGPAGPPGPPGAP 240
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 4/26 (15%)
Frame = +3
Query: 546 GPPGPTSIDRP----GADGTSGSPGP 611
GPPGP P G DG +G PGP
Sbjct: 247 GPPGPKGSPGPDGPAGVDGQAGPPGP 272
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSP 605
GPPGP RPG+DG G P
Sbjct: 158 GPPGPPG--RPGSDGQPGRP 175
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/23 (52%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Frame = +3
Query: 546 GPPG-PTSIDRPGADGTSGSPGP 611
GPPG P + PG G G PGP
Sbjct: 157 GPPGGPGELGGPGRGGNRGPPGP 179
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/23 (52%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Frame = +3
Query: 546 GPPG-PTSIDRPGADGTSGSPGP 611
GPPG P + PG G G PGP
Sbjct: 157 GPPGGPGELGGPGRGGNRGPPGP 179
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
GPPG +PG DG G+PGP
Sbjct: 228 GPPGQPG--QPGHDGQPGAPGP 247
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
GPPG +PG DG G+PGP
Sbjct: 195 GPPGQPG--QPGHDGQPGAPGP 214
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
GPPG +PG DG G+PGP
Sbjct: 228 GPPGQPG--QPGHDGQPGAPGP 247
>Z71262-8|CAA95812.1| 302|Caenorhabditis elegans Hypothetical
protein F22D6.10 protein.
Length = 302
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +3
Query: 546 GPPGPTSID-RPGADGTSGSPGPY*YTRAPLXGRSQDQCTS 665
GPPGP G DG +G G T + G SQD TS
Sbjct: 98 GPPGPPGEPGENGTDGQAGQDGQDGNTPSEEYGNSQDGSTS 138
>Z70682-4|CAA94581.1| 299|Caenorhabditis elegans Hypothetical
protein F08G5.4 protein.
Length = 299
Score = 28.3 bits (60), Expect = 6.7
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +3
Query: 465 GNSYIDLLISISHK*TS*NIGALSALVGPPGPTSID-RPGADGTSGSPGPY*YTRAP 632
G + I+ + ISH+ S I + GP GP PG DG G GP AP
Sbjct: 118 GKTGINGISLISHEGESGCIKCPAGEAGPAGPDGAPGAPGPDGQPGQDGPAGQPGAP 174
>Z49907-2|CAA90084.1| 324|Caenorhabditis elegans Hypothetical
protein B0491.2 protein.
Length = 324
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = +3
Query: 543 VGPPGPTSID-RPGADGTSGSPGP 611
VGP GP+ R G DGT G GP
Sbjct: 269 VGPEGPSGKQGRQGPDGTQGETGP 292
>U50191-3|AAK31557.1| 380|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 2 protein.
Length = 380
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 534 SALVGPPGPT-SIDRPGADGTSGSPG 608
S L GP GP S PG DG +G+PG
Sbjct: 243 SGLPGPWGPPGSAGMPGEDGYAGTPG 268
>U40937-1|AAA81693.1| 396|Caenorhabditis elegans Collagen protein
164 protein.
Length = 396
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = +3
Query: 534 SALVGPPGPT-SIDRPGADGTSGSPG 608
S GP G + S PG DGT G+PG
Sbjct: 103 SCPAGPKGESGSAGEPGTDGTDGTPG 128
>L12706-1|AAA17398.2| 360|Caenorhabditis elegans collagen protein.
Length = 360
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 534 SALVGPPGPT-SIDRPGADGTSGSPG 608
S L GP GP S PG DG +G+PG
Sbjct: 243 SGLPGPWGPPGSAGMPGEDGYAGTPG 268
>J03146-1|AAA65468.1| 324|Caenorhabditis elegans collagen protein.
Length = 324
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = +3
Query: 543 VGPPGPTSID-RPGADGTSGSPGP 611
VGP GP+ R G DGT G GP
Sbjct: 269 VGPEGPSGKQGRQGPDGTQGETGP 292
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +3
Query: 546 GPPGPTS-IDRPGADGTSGSPG 608
GPPGP PG+ G +GSPG
Sbjct: 250 GPPGPPGQAGTPGSPGDAGSPG 271
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 528 ALSALVGPPGPTSIDRPGADGTSGSPG 608
A L GPPGP PG DG G+PG
Sbjct: 143 AAPGLGGPPGP-----PGQDGIPGNPG 164
>AC024778-1|AAF60567.1| 393|Caenorhabditis elegans Collagen protein
115 protein.
Length = 393
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +3
Query: 540 LVGPPGPTSIDRPGADGTSGSPGPY 614
L GPPGP PG G GSPG Y
Sbjct: 277 LPGPPGP-----PGPPGLHGSPGSY 296
>Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical
protein W03G11.1b protein.
Length = 279
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPG 608
GPPG RPG DG G+PG
Sbjct: 217 GPPGAAG--RPGRDGQPGAPG 235
>Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical
protein W03G11.1a protein.
Length = 332
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPG 608
GPPG RPG DG G+PG
Sbjct: 270 GPPGAAG--RPGRDGQPGAPG 288
>Z49938-2|CAA90187.1| 306|Caenorhabditis elegans Hypothetical
protein F38A3.1 protein.
Length = 306
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +3
Query: 546 GPPGPTSID-RPGADGTSGSPG 608
G PGP+ D RPG G +G PG
Sbjct: 241 GEPGPSGPDGRPGQPGQAGQPG 262
>U53344-2|AAP13769.1| 301|Caenorhabditis elegans Collagen protein
166, isoform b protein.
Length = 301
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/22 (59%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +3
Query: 546 GPPG-PTSIDRPGADGTSGSPG 608
GPPG P S GADG G+PG
Sbjct: 115 GPPGAPGSDGEDGADGQPGAPG 136
>U53344-1|AAA96223.1| 363|Caenorhabditis elegans Collagen protein
166, isoform a protein.
Length = 363
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/22 (59%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +3
Query: 546 GPPG-PTSIDRPGADGTSGSPG 608
GPPG P S GADG G+PG
Sbjct: 177 GPPGAPGSDGEDGADGQPGAPG 198
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPG 608
GPPGP PG GT+G+PG
Sbjct: 159 GPPGPPGA--PGDAGTNGAPG 177
>AF039720-3|AAB96697.1| 281|Caenorhabditis elegans Collagen protein
54 protein.
Length = 281
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPG 608
GPPG PGADG +G+PG
Sbjct: 93 GPPGAPGT--PGADGEAGNPG 111
>AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen
protein 112 protein.
Length = 297
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = +3
Query: 546 GPPGPTSID-RPGADGTSGSPG 608
GP GP ++ +PGA G G+PG
Sbjct: 182 GPKGPPGVNGQPGAPGQDGNPG 203
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 546 GPPGPTSIDRPGADGTSGSPGP 611
GP GP+ +PG G+ G+PGP
Sbjct: 244 GPKGPSG--QPGQPGSDGNPGP 263
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,523,946
Number of Sequences: 27780
Number of extensions: 364821
Number of successful extensions: 2734
Number of sequences better than 10.0: 130
Number of HSP's better than 10.0 without gapping: 1168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2608
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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