Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_C20
(811 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39850-9|AAM45371.1| 440|Caenorhabditis elegans Polyq (poly glu... 73 3e-13
U39850-8|AAM45369.1| 558|Caenorhabditis elegans Polyq (poly glu... 73 3e-13
U39850-7|AAM45370.1| 573|Caenorhabditis elegans Polyq (poly glu... 73 3e-13
U39850-5|AAM45368.1| 670|Caenorhabditis elegans Polyq (poly glu... 73 3e-13
U39850-4|ABB51184.1| 672|Caenorhabditis elegans Polyq (poly glu... 73 3e-13
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 73 3e-13
AL132860-27|CAB60521.1| 365|Caenorhabditis elegans Hypothetical... 72 6e-13
AC006620-4|AAF39778.1| 305|Caenorhabditis elegans Hypothetical ... 72 6e-13
AF016430-4|AAB65372.1| 594|Caenorhabditis elegans Hypothetical ... 69 3e-12
AL023828-14|CAA19458.1| 269|Caenorhabditis elegans Hypothetical... 53 2e-07
U40935-1|AAA81687.1| 1131|Caenorhabditis elegans Hypothetical pr... 33 0.32
AF038604-4|AAO38680.1| 134|Caenorhabditis elegans Hypothetical ... 29 3.0
AF038604-3|AAB92012.1| 161|Caenorhabditis elegans Hypothetical ... 29 3.0
AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical... 29 3.9
AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical... 29 3.9
U88179-4|AAU05547.1| 576|Caenorhabditis elegans Hypothetical pr... 28 6.9
U88179-3|AAX88809.1| 751|Caenorhabditis elegans Hypothetical pr... 28 6.9
U88179-2|AAU05546.1| 770|Caenorhabditis elegans Hypothetical pr... 28 6.9
>U39850-9|AAM45371.1| 440|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform f
protein.
Length = 440
Score = 72.5 bits (170), Expect = 3e-13
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Frame = -3
Query: 653 VXPXSPVVDHNTRFSGIRPRDLARATKTLRDVQNDILGFVGTDTILIGHALENDLRALKL 474
V P + V+D NT FSG+ + A TL+ + +V DTILIGH+LE+DL+A+++
Sbjct: 305 VKPPTDVLDPNTEFSGLTMEQINSAPDTLKTCHQKLFKYVNADTILIGHSLESDLKAMRV 364
Query: 473 LHSAVVDTCALYPHARGFPMXXXXXXXXXXXXXRT-VQRGSNGHSPLEDARAAMDLVLLK 297
+H V+DT L+ R + + GH +EDA +DL+
Sbjct: 365 VHKNVIDTAILFRSTRDTKVALKVLSAKLLHKNIQGDNEDAIGHDSMEDALTCVDLIFYG 424
Query: 296 VQQEQA 279
++ ++
Sbjct: 425 LRNPES 430
>U39850-8|AAM45369.1| 558|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform d
protein.
Length = 558
Score = 72.5 bits (170), Expect = 3e-13
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Frame = -3
Query: 653 VXPXSPVVDHNTRFSGIRPRDLARATKTLRDVQNDILGFVGTDTILIGHALENDLRALKL 474
V P + V+D NT FSG+ + A TL+ + +V DTILIGH+LE+DL+A+++
Sbjct: 423 VKPPTDVLDPNTEFSGLTMEQINSAPDTLKTCHQKLFKYVNADTILIGHSLESDLKAMRV 482
Query: 473 LHSAVVDTCALYPHARGFPMXXXXXXXXXXXXXRT-VQRGSNGHSPLEDARAAMDLVLLK 297
+H V+DT L+ R + + GH +EDA +DL+
Sbjct: 483 VHKNVIDTAILFRSTRDTKVALKVLSAKLLHKNIQGDNEDAIGHDSMEDALTCVDLIFYG 542
Query: 296 VQQEQA 279
++ ++
Sbjct: 543 LRNPES 548
>U39850-7|AAM45370.1| 573|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform e
protein.
Length = 573
Score = 72.5 bits (170), Expect = 3e-13
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Frame = -3
Query: 653 VXPXSPVVDHNTRFSGIRPRDLARATKTLRDVQNDILGFVGTDTILIGHALENDLRALKL 474
V P + V+D NT FSG+ + A TL+ + +V DTILIGH+LE+DL+A+++
Sbjct: 438 VKPPTDVLDPNTEFSGLTMEQINSAPDTLKTCHQKLFKYVNADTILIGHSLESDLKAMRV 497
Query: 473 LHSAVVDTCALYPHARGFPMXXXXXXXXXXXXXRT-VQRGSNGHSPLEDARAAMDLVLLK 297
+H V+DT L+ R + + GH +EDA +DL+
Sbjct: 498 VHKNVIDTAILFRSTRDTKVALKVLSAKLLHKNIQGDNEDAIGHDSMEDALTCVDLIFYG 557
Query: 296 VQQEQA 279
++ ++
Sbjct: 558 LRNPES 563
>U39850-5|AAM45368.1| 670|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform c
protein.
Length = 670
Score = 72.5 bits (170), Expect = 3e-13
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Frame = -3
Query: 653 VXPXSPVVDHNTRFSGIRPRDLARATKTLRDVQNDILGFVGTDTILIGHALENDLRALKL 474
V P + V+D NT FSG+ + A TL+ + +V DTILIGH+LE+DL+A+++
Sbjct: 535 VKPPTDVLDPNTEFSGLTMEQINSAPDTLKTCHQKLFKYVNADTILIGHSLESDLKAMRV 594
Query: 473 LHSAVVDTCALYPHARGFPMXXXXXXXXXXXXXRT-VQRGSNGHSPLEDARAAMDLVLLK 297
+H V+DT L+ R + + GH +EDA +DL+
Sbjct: 595 VHKNVIDTAILFRSTRDTKVALKVLSAKLLHKNIQGDNEDAIGHDSMEDALTCVDLIFYG 654
Query: 296 VQQEQA 279
++ ++
Sbjct: 655 LRNPES 660
>U39850-4|ABB51184.1| 672|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform g
protein.
Length = 672
Score = 72.5 bits (170), Expect = 3e-13
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Frame = -3
Query: 653 VXPXSPVVDHNTRFSGIRPRDLARATKTLRDVQNDILGFVGTDTILIGHALENDLRALKL 474
V P + V+D NT FSG+ + A TL+ + +V DTILIGH+LE+DL+A+++
Sbjct: 537 VKPPTDVLDPNTEFSGLTMEQINSAPDTLKTCHQKLFKYVNADTILIGHSLESDLKAMRV 596
Query: 473 LHSAVVDTCALYPHARGFPMXXXXXXXXXXXXXRT-VQRGSNGHSPLEDARAAMDLVLLK 297
+H V+DT L+ R + + GH +EDA +DL+
Sbjct: 597 VHKNVIDTAILFRSTRDTKVALKVLSAKLLHKNIQGDNEDAIGHDSMEDALTCVDLIFYG 656
Query: 296 VQQEQA 279
++ ++
Sbjct: 657 LRNPES 662
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 72.5 bits (170), Expect = 3e-13
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Frame = -3
Query: 653 VXPXSPVVDHNTRFSGIRPRDLARATKTLRDVQNDILGFVGTDTILIGHALENDLRALKL 474
V P + V+D NT FSG+ + A TL+ + +V DTILIGH+LE+DL+A+++
Sbjct: 1512 VKPPTDVLDPNTEFSGLTMEQINSAPDTLKTCHQKLFKYVNADTILIGHSLESDLKAMRV 1571
Query: 473 LHSAVVDTCALYPHARGFPMXXXXXXXXXXXXXRT-VQRGSNGHSPLEDARAAMDLVLLK 297
+H V+DT L+ R + + GH +EDA +DL+
Sbjct: 1572 VHKNVIDTAILFRSTRDTKVALKVLSAKLLHKNIQGDNEDAIGHDSMEDALTCVDLIFYG 1631
Query: 296 VQQEQA 279
++ ++
Sbjct: 1632 LRNPES 1637
>AL132860-27|CAB60521.1| 365|Caenorhabditis elegans Hypothetical
protein Y56A3A.33 protein.
Length = 365
Score = 71.7 bits (168), Expect = 6e-13
Identities = 36/133 (27%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
Frame = -3
Query: 695 AVIAADGRLVYRSLVXPXSPVVDHNTRFSGIRPRDLARATKTLRDVQNDILGFVGTDTIL 516
+++ G+++ + P V+ N+ FSG+ +D+ A +L + + + ++T+L
Sbjct: 201 SLVDMKGKVLLDTFALPVFEVISFNSTFSGVTEKDMESAI-SLEACRLQLFQLINSETLL 259
Query: 515 IGHALENDLRALKLLHSAVVDTCALY---PHARGFPMXXXXXXXXXXXXXRTVQRGSNGH 345
+GH+LE+DL+AL+L+H V+DT L+ +R + + + VQ ++GH
Sbjct: 260 VGHSLESDLKALRLVHHNVIDTAVLFSIVDPSRSYILKLSLQNLAKKYLCKDVQSEASGH 319
Query: 344 SPLEDARAAMDLV 306
S +ED+ M+L+
Sbjct: 320 SSIEDSHTCMELL 332
>AC006620-4|AAF39778.1| 305|Caenorhabditis elegans Hypothetical
protein C51G7.1 protein.
Length = 305
Score = 71.7 bits (168), Expect = 6e-13
Identities = 36/133 (27%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
Frame = -3
Query: 695 AVIAADGRLVYRSLVXPXSPVVDHNTRFSGIRPRDLARATKTLRDVQNDILGFVGTDTIL 516
+++ G+++ + P V+ N+ FSG+ +D+ A +L + + + ++T+L
Sbjct: 164 SLVDMKGKVLLDTFALPVFEVISFNSTFSGVTEKDMESAI-SLEACRLQLFQLINSETLL 222
Query: 515 IGHALENDLRALKLLHSAVVDTCALY---PHARGFPMXXXXXXXXXXXXXRTVQRGSNGH 345
+GH+LE+DL+AL+L+H V+DT L+ +R + + + VQ ++GH
Sbjct: 223 VGHSLESDLKALRLVHHNVIDTAVLFSIVDPSRSYILKLSLQNLAKKYLCKDVQSEASGH 282
Query: 344 SPLEDARAAMDLV 306
S +ED+ M+L+
Sbjct: 283 SSIEDSHTCMELL 295
>AF016430-4|AAB65372.1| 594|Caenorhabditis elegans Hypothetical
protein C05C8.5 protein.
Length = 594
Score = 69.3 bits (162), Expect = 3e-12
Identities = 41/124 (33%), Positives = 60/124 (48%)
Frame = -3
Query: 659 SLVXPXSPVVDHNTRFSGIRPRDLARATKTLRDVQNDILGFVGTDTILIGHALENDLRAL 480
+LV P + D+ TR+SGI P + T TL DVQ I + D IL+GH+LE+DL+A+
Sbjct: 254 TLVKPEGRITDYVTRWSGITPDMMEGVTTTLGDVQKAIQSLLPPDAILVGHSLEHDLQAM 313
Query: 479 KLLHSAVVDTCALYPHARGFPMXXXXXXXXXXXXXRTVQRGSNGHSPLEDARAAMDLVLL 300
K+ H +D + + + GH EDA AAM L L
Sbjct: 314 KMTHPFCLDVGHVLNYTNSNTEFRNSLKNLTELFLGAQIQSEFGHCSYEDAWAAMRLAQL 373
Query: 299 KVQQ 288
K+++
Sbjct: 374 KLEK 377
>AL023828-14|CAA19458.1| 269|Caenorhabditis elegans Hypothetical
protein Y17G7B.12 protein.
Length = 269
Score = 53.2 bits (122), Expect = 2e-07
Identities = 40/127 (31%), Positives = 55/127 (43%), Gaps = 4/127 (3%)
Frame = -3
Query: 677 GRLVYRSLVXPXSPVVDHNTRFSGIRPRDLARATKTLRDVQNDILGFVGTDTILIGHALE 498
G++VY V P V D T SGIRP ++ +A R Q ++ + I+IGHA+
Sbjct: 131 GKIVYDKFVKPTEKVTDFRTAVSGIRPENMIKAIPFDR-AQTEVSKLI-DGRIVIGHAVH 188
Query: 497 NDLRALKLLH--SAVVDT--CALYPHARGFPMXXXXXXXXXXXXXRTVQRGSNGHSPLED 330
ND R LKL H DT C + + +QRG H + D
Sbjct: 189 NDFRVLKLNHIRKLTRDTAKCTILKNMANHHGTPSLKKLAKEVLGIEIQRGE--HDSITD 246
Query: 329 ARAAMDL 309
AR A+ L
Sbjct: 247 ARVALRL 253
>U40935-1|AAA81687.1| 1131|Caenorhabditis elegans Hypothetical protein
F31E3.4 protein.
Length = 1131
Score = 32.7 bits (71), Expect = 0.32
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Frame = -3
Query: 635 VVDHNTRFSGIRPRDLARAT--KTLRDVQNDILG---FVGTDTILIGHALENDLRALK-- 477
VVD+ T+FSGI DL T K L + +L + +GHAL ND L
Sbjct: 962 VVDYLTKFSGIVKADLCPTTSEKYLTTHKRLLLRMHVLIQRGVTFVGHALHNDFTVLNVH 1021
Query: 476 LLHSAVVDTCAL 441
+ S ++DT L
Sbjct: 1022 VAESQIIDTVTL 1033
>AF038604-4|AAO38680.1| 134|Caenorhabditis elegans Hypothetical
protein B0546.4b protein.
Length = 134
Score = 29.5 bits (63), Expect = 3.0
Identities = 11/50 (22%), Positives = 23/50 (46%)
Frame = -2
Query: 477 VIAQRSCRYMCFISTRTRIPNAPITTRPIRGASGPYCTKRQQWSLAIGRC 328
+ R Y C + + +T++ G++GP ++ W++ GRC
Sbjct: 8 ICGARGSLYGCVVCNTYLTCSKELTSKAFTGSTGPATLFKRAWNVVYGRC 57
>AF038604-3|AAB92012.1| 161|Caenorhabditis elegans Hypothetical
protein B0546.4a protein.
Length = 161
Score = 29.5 bits (63), Expect = 3.0
Identities = 11/50 (22%), Positives = 23/50 (46%)
Frame = -2
Query: 477 VIAQRSCRYMCFISTRTRIPNAPITTRPIRGASGPYCTKRQQWSLAIGRC 328
+ R Y C + + +T++ G++GP ++ W++ GRC
Sbjct: 8 ICGARGSLYGCVVCNTYLTCSKELTSKAFTGSTGPATLFKRAWNVVYGRC 57
>AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical
protein Y43F8B.3b protein.
Length = 1398
Score = 29.1 bits (62), Expect = 3.9
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 12/80 (15%)
Frame = -2
Query: 438 STRTRIPNAPITTRPIRGASGPYCTKRQQWSLAIGRC-----SSCYG-------FGAT*S 295
S+R++ P+ T P + +GPY R ++ GRC S C G F S
Sbjct: 65 SSRSQPPSGQSCTLPRQIGTGPYRIPRWYYNPVRGRCELFYWSGCCGNGNNFQTFQTCQS 124
Query: 294 TAGASEQSTQHIISTTYFAT 235
T AS Q+T S F+T
Sbjct: 125 TCEASSQTTSQTSSQIVFST 144
>AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical
protein Y43F8B.3a protein.
Length = 1816
Score = 29.1 bits (62), Expect = 3.9
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 12/80 (15%)
Frame = -2
Query: 438 STRTRIPNAPITTRPIRGASGPYCTKRQQWSLAIGRC-----SSCYG-------FGAT*S 295
S+R++ P+ T P + +GPY R ++ GRC S C G F S
Sbjct: 65 SSRSQPPSGQSCTLPRQIGTGPYRIPRWYYNPVRGRCELFYWSGCCGNGNNFQTFQTCQS 124
Query: 294 TAGASEQSTQHIISTTYFAT 235
T AS Q+T S F+T
Sbjct: 125 TCEASSQTTSQTSSQIVFST 144
>U88179-4|AAU05547.1| 576|Caenorhabditis elegans Hypothetical
protein R57.1b protein.
Length = 576
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = -3
Query: 542 GFVGTDTILIGHALENDLRALKLLHSAVVDTCALYPHARGF 420
G D + I H ND + LKL+ + AL + GF
Sbjct: 157 GSASADVVYINHGTANDFKNLKLMGVDIKGKIALMRYGHGF 197
>U88179-3|AAX88809.1| 751|Caenorhabditis elegans Hypothetical
protein R57.1c protein.
Length = 751
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = -3
Query: 542 GFVGTDTILIGHALENDLRALKLLHSAVVDTCALYPHARGF 420
G D + I H ND + LKL+ + AL + GF
Sbjct: 157 GSASADVVYINHGTANDFKNLKLMGVDIKGKIALMRYGHGF 197
>U88179-2|AAU05546.1| 770|Caenorhabditis elegans Hypothetical
protein R57.1a protein.
Length = 770
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = -3
Query: 542 GFVGTDTILIGHALENDLRALKLLHSAVVDTCALYPHARGF 420
G D + I H ND + LKL+ + AL + GF
Sbjct: 176 GSASADVVYINHGTANDFKNLKLMGVDIKGKIALMRYGHGF 216
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,592,821
Number of Sequences: 27780
Number of extensions: 299388
Number of successful extensions: 663
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 650
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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