Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_C19
(774 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X63527-1|CAA45090.1| 196|Homo sapiens ribosomal protein L19 pro... 178 2e-44
S56985-1|AAB25672.1| 196|Homo sapiens ribosomal protein L19 pro... 178 2e-44
BX537435-1|CAD97677.1| 205|Homo sapiens hypothetical protein pr... 178 2e-44
BC095445-1|AAH95445.1| 196|Homo sapiens ribosomal protein L19 p... 178 2e-44
BC066315-1|AAH66315.1| 196|Homo sapiens ribosomal protein L19 p... 178 2e-44
BC062709-1|AAH62709.1| 196|Homo sapiens ribosomal protein L19 p... 178 2e-44
BC013016-1|AAH13016.1| 196|Homo sapiens ribosomal protein L19 p... 178 2e-44
BC000530-1|AAH00530.1| 196|Homo sapiens ribosomal protein L19 p... 178 2e-44
AK223082-1|BAD96802.1| 196|Homo sapiens ribosomal protein L19 v... 178 2e-44
AY157980-1|AAN76335.1| 173|Homo sapiens ribosomal protein L19 p... 147 3e-35
>X63527-1|CAA45090.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 178 bits (434), Expect = 2e-44
Identities = 81/106 (76%), Positives = 93/106 (87%)
Frame = -2
Query: 662 MSSLKLQKRLAASVMRCGKKKVWXDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 483
MS L+LQKRLA+SV+RCGKKKVW DPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 482 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWVQRQRVLRKLL 345
AR RKNT ARRKGRH G GKR+GTANARMP+K W++R R+LR+LL
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLL 106
Score = 89.4 bits (212), Expect = 1e-17
Identities = 37/51 (72%), Positives = 47/51 (92%)
Frame = -3
Query: 340 KYRTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 188
+YR +KKIDRH+YHSLY+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 108 RYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>S56985-1|AAB25672.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 178 bits (434), Expect = 2e-44
Identities = 81/106 (76%), Positives = 93/106 (87%)
Frame = -2
Query: 662 MSSLKLQKRLAASVMRCGKKKVWXDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 483
MS L+LQKRLA+SV+RCGKKKVW DPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 482 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWVQRQRVLRKLL 345
AR RKNT ARRKGRH G GKR+GTANARMP+K W++R R+LR+LL
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLL 106
Score = 89.4 bits (212), Expect = 1e-17
Identities = 37/51 (72%), Positives = 47/51 (92%)
Frame = -3
Query: 340 KYRTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 188
+YR +KKIDRH+YHSLY+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 108 RYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>BX537435-1|CAD97677.1| 205|Homo sapiens hypothetical protein
protein.
Length = 205
Score = 178 bits (434), Expect = 2e-44
Identities = 81/106 (76%), Positives = 93/106 (87%)
Frame = -2
Query: 662 MSSLKLQKRLAASVMRCGKKKVWXDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 483
MS L+LQKRLA+SV+RCGKKKVW DPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 10 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 69
Query: 482 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWVQRQRVLRKLL 345
AR RKNT ARRKGRH G GKR+GTANARMP+K W++R R+LR+LL
Sbjct: 70 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLL 115
Score = 89.4 bits (212), Expect = 1e-17
Identities = 37/51 (72%), Positives = 47/51 (92%)
Frame = -3
Query: 340 KYRTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 188
+YR +KKIDRH+YHSLY+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 117 RYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 167
>BC095445-1|AAH95445.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 178 bits (434), Expect = 2e-44
Identities = 81/106 (76%), Positives = 93/106 (87%)
Frame = -2
Query: 662 MSSLKLQKRLAASVMRCGKKKVWXDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 483
MS L+LQKRLA+SV+RCGKKKVW DPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 482 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWVQRQRVLRKLL 345
AR RKNT ARRKGRH G GKR+GTANARMP+K W++R R+LR+LL
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLL 106
Score = 89.4 bits (212), Expect = 1e-17
Identities = 37/51 (72%), Positives = 47/51 (92%)
Frame = -3
Query: 340 KYRTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 188
+YR +KKIDRH+YHSLY+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 108 RYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>BC066315-1|AAH66315.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 178 bits (434), Expect = 2e-44
Identities = 81/106 (76%), Positives = 93/106 (87%)
Frame = -2
Query: 662 MSSLKLQKRLAASVMRCGKKKVWXDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 483
MS L+LQKRLA+SV+RCGKKKVW DPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 482 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWVQRQRVLRKLL 345
AR RKNT ARRKGRH G GKR+GTANARMP+K W++R R+LR+LL
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLL 106
Score = 89.4 bits (212), Expect = 1e-17
Identities = 37/51 (72%), Positives = 47/51 (92%)
Frame = -3
Query: 340 KYRTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 188
+YR +KKIDRH+YHSLY+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 108 RYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>BC062709-1|AAH62709.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 178 bits (434), Expect = 2e-44
Identities = 81/106 (76%), Positives = 93/106 (87%)
Frame = -2
Query: 662 MSSLKLQKRLAASVMRCGKKKVWXDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 483
MS L+LQKRLA+SV+RCGKKKVW DPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 482 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWVQRQRVLRKLL 345
AR RKNT ARRKGRH G GKR+GTANARMP+K W++R R+LR+LL
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLL 106
Score = 89.4 bits (212), Expect = 1e-17
Identities = 37/51 (72%), Positives = 47/51 (92%)
Frame = -3
Query: 340 KYRTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 188
+YR +KKIDRH+YHSLY+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 108 RYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>BC013016-1|AAH13016.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 178 bits (434), Expect = 2e-44
Identities = 81/106 (76%), Positives = 93/106 (87%)
Frame = -2
Query: 662 MSSLKLQKRLAASVMRCGKKKVWXDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 483
MS L+LQKRLA+SV+RCGKKKVW DPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 482 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWVQRQRVLRKLL 345
AR RKNT ARRKGRH G GKR+GTANARMP+K W++R R+LR+LL
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLL 106
Score = 89.4 bits (212), Expect = 1e-17
Identities = 37/51 (72%), Positives = 47/51 (92%)
Frame = -3
Query: 340 KYRTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 188
+YR +KKIDRH+YHSLY+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 108 RYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>BC000530-1|AAH00530.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 178 bits (434), Expect = 2e-44
Identities = 81/106 (76%), Positives = 93/106 (87%)
Frame = -2
Query: 662 MSSLKLQKRLAASVMRCGKKKVWXDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 483
MS L+LQKRLA+SV+RCGKKKVW DPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 482 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWVQRQRVLRKLL 345
AR RKNT ARRKGRH G GKR+GTANARMP+K W++R R+LR+LL
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLL 106
Score = 89.4 bits (212), Expect = 1e-17
Identities = 37/51 (72%), Positives = 47/51 (92%)
Frame = -3
Query: 340 KYRTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 188
+YR +KKIDRH+YHSLY+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 108 RYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>AK223082-1|BAD96802.1| 196|Homo sapiens ribosomal protein L19
variant protein.
Length = 196
Score = 178 bits (434), Expect = 2e-44
Identities = 81/106 (76%), Positives = 93/106 (87%)
Frame = -2
Query: 662 MSSLKLQKRLAASVMRCGKKKVWXDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 483
MS L+LQKRLA+SV+RCGKKKVW DPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 482 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWVQRQRVLRKLL 345
AR RKNT ARRKGRH G GKR+GTANARMP+K W++R R+LR+LL
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLL 106
Score = 89.4 bits (212), Expect = 1e-17
Identities = 37/51 (72%), Positives = 47/51 (92%)
Frame = -3
Query: 340 KYRTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 188
+YR +KKIDRH+YHSLY+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 108 RYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>AY157980-1|AAN76335.1| 173|Homo sapiens ribosomal protein L19
protein.
Length = 173
Score = 147 bits (357), Expect = 3e-35
Identities = 66/87 (75%), Positives = 75/87 (86%)
Frame = -2
Query: 605 KKVWXDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFG 426
KKVW DPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSRAR RKNT ARRKGRH G G
Sbjct: 1 KKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIG 60
Query: 425 KRRGTANARMPQKELWVQRQRVLRKLL 345
KR+GTANARMP+K W++R R+LR+LL
Sbjct: 61 KRKGTANARMPEKVTWMRRMRILRRLL 87
Score = 89.4 bits (212), Expect = 1e-17
Identities = 37/51 (72%), Positives = 47/51 (92%)
Frame = -3
Query: 340 KYRTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 188
+YR +KKIDRH+YHSLY+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 89 RYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 139
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,080,564
Number of Sequences: 237096
Number of extensions: 2477515
Number of successful extensions: 5024
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5024
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -