Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_C16
(835 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 79 4e-15
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 78 1e-14
03_01_0034 + 318432-318825,318902-319851 77 2e-14
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 76 4e-14
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 75 5e-14
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 74 1e-13
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 73 2e-13
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 71 9e-13
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 38 0.013
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 37 0.023
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 36 0.053
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 35 0.092
05_04_0194 + 18949268-18951514,18952063-18952215,18952304-18954241 29 6.0
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 79.0 bits (186), Expect = 4e-15
Identities = 41/80 (51%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Frame = -1
Query: 802 PXXVSXCXHLXRXSTAXXELFKXXSXQLPLCSGAR-FFALXTGEGMDEMEFTEAESNMXD 626
P +S ST+ E+F+ S Q + F TGEGMDEMEFTEAESNM D
Sbjct: 379 PRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 438
Query: 625 LVSEYXQYQEATADEDAEFD 566
LVSEY QYQ+ATADE+ E++
Sbjct: 439 LVSEYQQYQDATADEEGEYE 458
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 77.8 bits (183), Expect = 1e-14
Identities = 40/80 (50%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Frame = -1
Query: 802 PXXVSXCXHLXRXSTAXXELFKXXSXQLPLCSGAR-FFALXTGEGMDEMEFTEAESNMXD 626
P +S ST+ E+F+ S Q + F TGEGMDEMEFTEAESNM D
Sbjct: 358 PRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 417
Query: 625 LVSEYXQYQEATADEDAEFD 566
LVSEY QYQ+ATADE+ +++
Sbjct: 418 LVSEYQQYQDATADEEGDYE 437
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 77.0 bits (181), Expect = 2e-14
Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Frame = -1
Query: 763 STAXXELFKXXSXQLPLCSGAR-FFALXTGEGMDEMEFTEAESNMXDLVSEYXQYQEATA 587
ST+ E+F+ S Q + F TGEGMDEMEFTEAESNM DLVSEY QYQ+ATA
Sbjct: 371 STSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
Query: 586 DEDAEFD 566
D++ E++
Sbjct: 431 DDEGEYE 437
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 75.8 bits (178), Expect = 4e-14
Identities = 41/87 (47%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Frame = -1
Query: 802 PXXVSXCXHLXRXSTAXXELFKXXSXQLPLCSGAR-FFALXTGEGMDEMEFTEAESNMXD 626
P +S ST+ E+F+ S Q + F T EGMDEMEFTEAESNM D
Sbjct: 374 PVGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTSEGMDEMEFTEAESNMND 433
Query: 625 LVSEYXQYQEATADEDAEFDRGAGAGD 545
LV+EY QYQ+ATA++D + D A A D
Sbjct: 434 LVAEYQQYQDATAEDDYDEDDDAAAAD 460
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 75.4 bits (177), Expect = 5e-14
Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Frame = -1
Query: 802 PXXVSXCXHLXRXSTAXXELFKXXSXQLPLCSGAR-FFALXTGEGMDEMEFTEAESNMXD 626
P +S ST+ E+F+ S Q + F TGEGMDEMEFTEAESNM D
Sbjct: 538 PRGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 597
Query: 625 LVSEYXQYQEATADEDAEFD 566
LVSEY QYQ+ATADE AE++
Sbjct: 598 LVSEYQQYQDATADE-AEYE 616
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 74.1 bits (174), Expect = 1e-13
Identities = 38/65 (58%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = -1
Query: 763 STAXXELFKXXSXQLPLCSGAR-FFALXTGEGMDEMEFTEAESNMXDLVSEYXQYQEATA 587
ST+ E+F+ S Q + F TGEGMDEMEFTEAESNM DLV+EY QYQ+ATA
Sbjct: 371 STSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATA 430
Query: 586 DEDAE 572
DE+ E
Sbjct: 431 DEEYE 435
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 73.3 bits (172), Expect = 2e-13
Identities = 37/65 (56%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = -1
Query: 763 STAXXELFKXXSXQLPLCSGAR-FFALXTGEGMDEMEFTEAESNMXDLVSEYXQYQEATA 587
ST+ E+F+ S Q + F TGEGMDEMEFTEAESNM DLV+EY QYQ+ATA
Sbjct: 371 STSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATA 430
Query: 586 DEDAE 572
D++ E
Sbjct: 431 DDEEE 435
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 71.3 bits (167), Expect = 9e-13
Identities = 36/63 (57%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Frame = -1
Query: 763 STAXXELFKXXSXQLPLCSGAR-FFALXTGEGMDEMEFTEAESNMXDLVSEYXQYQEATA 587
ST+ E+F+ S Q + F TGEGMDEMEFTEAESNM DLV+EY QYQ+ATA
Sbjct: 371 STSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATA 430
Query: 586 DED 578
+E+
Sbjct: 431 EEE 433
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 37.5 bits (83), Expect = 0.013
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = -1
Query: 763 STAXXELFKXXSXQLPLCSGARFFA-LXTGEGMDEMEFTEAESNMXDLVSEYXQYQEATA 587
+TA E+F + L R F GEGM+E EF+EA ++ L +Y +
Sbjct: 462 NTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEVE 521
Query: 586 DEDAE 572
D+D E
Sbjct: 522 DDDEE 526
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 36.7 bits (81), Expect = 0.023
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = -1
Query: 763 STAXXELFKXXSXQLPLCSGARFFA-LXTGEGMDEMEFTEAESNMXDLVSEYXQYQEATA 587
ST+ E+F + L R F GEGM+E EF+EA ++ L +Y + A +
Sbjct: 381 STSVVEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV-GAES 439
Query: 586 DEDAEFDRG 560
DE+ + D G
Sbjct: 440 DENEDGDDG 448
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 35.5 bits (78), Expect = 0.053
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = -1
Query: 763 STAXXELFKXXSXQLPLCSGARFFA-LXTGEGMDEMEFTEAESNMXDLVSEYXQYQEATA 587
+TA E+F + L R F GEGM+E EF+EA ++ L +Y + A
Sbjct: 381 NTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEGA 440
Query: 586 DED 578
D++
Sbjct: 441 DDE 443
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 34.7 bits (76), Expect = 0.092
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = -1
Query: 763 STAXXELFKXXSXQLPLCSGARFFA-LXTGEGMDEMEFTEAESNMXDLVSEYXQYQEATA 587
ST+ E+F + L R F GEGM+E EF+EA ++ L +Y +
Sbjct: 381 STSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGSEFD 440
Query: 586 DEDAEFDRG 560
D D E D G
Sbjct: 441 DGD-EGDEG 448
>05_04_0194 + 18949268-18951514,18952063-18952215,18952304-18954241
Length = 1445
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1
Query: 676 EGMDEMEFTEAESNMXDLVSEYXQYQEATADEDAEFDRGAGAGD 545
E DEMEF + ++N+ D +E + D DA+ D GD
Sbjct: 317 EAEDEMEFADLDTNVVDWEAEDEMEFDDDNDNDADDDGDNFGGD 360
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,468,693
Number of Sequences: 37544
Number of extensions: 276170
Number of successful extensions: 631
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 631
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2303447664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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