Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_C11
(817 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC046145-1|AAH46145.1| 369|Homo sapiens LOC339047 protein protein. 34 0.71
AF132984-1|AAD34394.1| 350|Homo sapiens nuclear pore complex in... 34 0.71
AC002045-1|AAC05438.1| 350|Homo sapiens Unknown protein product... 33 1.2
Z83689-1|CAB69660.1| 1211|Homo sapiens AF-4 protein. 33 1.6
X83606-1|CAA58585.1| 389|Homo sapiens putative FelC protein. 33 1.6
L25050-1|AAA36642.1| 1206|Homo sapiens serine/proline-rich prote... 33 1.6
L13773-1|AAA58360.1| 1210|Homo sapiens AF-4 protein. 33 1.6
BC114930-1|AAI14931.1| 1211|Homo sapiens AF4/FMR2 family, member... 33 1.6
BC017432-1|AAH17432.1| 415|Homo sapiens Unknown (protein for IM... 33 1.6
AJ238093-1|CAB52416.1| 415|Homo sapiens AF-4 protein. 33 1.6
AC093779-1|AAY40899.1| 415|Homo sapiens unknown protein. 33 1.6
>BC046145-1|AAH46145.1| 369|Homo sapiens LOC339047 protein protein.
Length = 369
Score = 33.9 bits (74), Expect = 0.71
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 48 TYTTMITQ*QGMTRRESRDSLRTKIDP-ARAGICTRALSLALTHRHVS 188
TY M + Q + RR + D R KI P AR +C R A+ HRH S
Sbjct: 180 TYMEMFQRAQAL-RRRAEDYYRCKITPSARKPLCNRVRMAAVEHRHSS 226
>AF132984-1|AAD34394.1| 350|Homo sapiens nuclear pore complex
interacting protein NPIP protein.
Length = 350
Score = 33.9 bits (74), Expect = 0.71
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 48 TYTTMITQ*QGMTRRESRDSLRTKIDP-ARAGICTRALSLALTHRHVS 188
TY M + Q + RR + D R KI P AR +C R A+ HRH S
Sbjct: 180 TYMEMFQRAQAL-RRRAEDYYRCKITPSARKPLCNRVRMAAVEHRHSS 226
>AC002045-1|AAC05438.1| 350|Homo sapiens Unknown protein product
CIT987SK-A-589H1_1 splice form 1 protein.
Length = 350
Score = 33.1 bits (72), Expect = 1.2
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 48 TYTTMITQ*QGMTRRESRDSLRTKIDP-ARAGICTRALSLALTHRHVS 188
TY M + Q + RR + D R KI P AR +C R A HRH S
Sbjct: 180 TYMEMFQRAQAL-RRRAEDYYRCKITPSARKPLCNRVRMAAAEHRHSS 226
>Z83689-1|CAB69660.1| 1211|Homo sapiens AF-4 protein.
Length = 1211
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +1
Query: 505 PIIPYM*MTIPHSRFLYSRHNYGTYTPVNKELLLYVYAHTPTHAENCTPPGP 660
P+IP +IP S F S H+ +TP + L + +H P A+ T P P
Sbjct: 93 PLIPDKGSSIPSSSFHTSVHHQSIHTPASGPLSVGNISHNPKMAQPRTEPMP 144
>X83606-1|CAA58585.1| 389|Homo sapiens putative FelC protein.
Length = 389
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +1
Query: 505 PIIPYM*MTIPHSRFLYSRHNYGTYTPVNKELLLYVYAHTPTHAENCTPPGP 660
P+IP +IP S F S H+ +TP + L + +H P A+ T P P
Sbjct: 93 PLIPDKGSSIPSSSFHTSVHHQSIHTPASGPLSVGNISHNPKMAQPRTEPMP 144
>L25050-1|AAA36642.1| 1206|Homo sapiens serine/proline-rich protein
protein.
Length = 1206
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +1
Query: 505 PIIPYM*MTIPHSRFLYSRHNYGTYTPVNKELLLYVYAHTPTHAENCTPPGP 660
P+IP +IP S F S H+ +TP + L + +H P A+ T P P
Sbjct: 93 PLIPDKGSSIPSSSFHTSVHHQSIHTPASGPLSVGNISHNPKMAQPRTEPMP 144
>L13773-1|AAA58360.1| 1210|Homo sapiens AF-4 protein.
Length = 1210
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +1
Query: 505 PIIPYM*MTIPHSRFLYSRHNYGTYTPVNKELLLYVYAHTPTHAENCTPPGP 660
P+IP +IP S F S H+ +TP + L + +H P A+ T P P
Sbjct: 93 PLIPDKGSSIPSSSFHTSVHHQSIHTPASGPLSVGNISHNPKMAQPRTEPMP 144
>BC114930-1|AAI14931.1| 1211|Homo sapiens AF4/FMR2 family, member 1
protein.
Length = 1211
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +1
Query: 505 PIIPYM*MTIPHSRFLYSRHNYGTYTPVNKELLLYVYAHTPTHAENCTPPGP 660
P+IP +IP S F S H+ +TP + L + +H P A+ T P P
Sbjct: 93 PLIPDKGSSIPSSSFHTSVHHQSIHTPASGPLSVGNISHNPKMAQPRTEPMP 144
>BC017432-1|AAH17432.1| 415|Homo sapiens Unknown (protein for
IMAGE:4720485) protein.
Length = 415
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +1
Query: 505 PIIPYM*MTIPHSRFLYSRHNYGTYTPVNKELLLYVYAHTPTHAENCTPPGP 660
P+IP +IP S F S H+ +TP + L + +H P A+ T P P
Sbjct: 100 PLIPDKGSSIPSSSFHTSVHHQSIHTPASGPLSVGNISHNPKMAQPRTEPMP 151
>AJ238093-1|CAB52416.1| 415|Homo sapiens AF-4 protein.
Length = 415
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +1
Query: 505 PIIPYM*MTIPHSRFLYSRHNYGTYTPVNKELLLYVYAHTPTHAENCTPPGP 660
P+IP +IP S F S H+ +TP + L + +H P A+ T P P
Sbjct: 87 PLIPDKGSSIPSSSFHTSVHHQSIHTPASGPLSVGNISHNPKMAQPRTEPMP 138
>AC093779-1|AAY40899.1| 415|Homo sapiens unknown protein.
Length = 415
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +1
Query: 505 PIIPYM*MTIPHSRFLYSRHNYGTYTPVNKELLLYVYAHTPTHAENCTPPGP 660
P+IP +IP S F S H+ +TP + L + +H P A+ T P P
Sbjct: 87 PLIPDKGSSIPSSSFHTSVHHQSIHTPASGPLSVGNISHNPKMAQPRTEPMP 138
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,808,199
Number of Sequences: 237096
Number of extensions: 2376849
Number of successful extensions: 3724
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3723
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10147868276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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