Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_C09
         (797 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0677 - 24202037-24202444,24202499-24202795,24202960-242030...    28   9.9  

>01_05_0677 -
           24202037-24202444,24202499-24202795,24202960-24203009,
           24204534-24204589,24205751-24206040,24206100-24206488,
           24210578-24210818
          Length = 576

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 12/52 (23%), Positives = 33/52 (63%)
 Frame = -2

Query: 379 KNVIDMSIQIDLNIIVSFKEYGSKPALNKG*YLTCYLSKMSFRRVL*LPMEY 224
           +++ D+   + ++ IV+ K++ ++  + +  Y TC +S+  FRR+L + +++
Sbjct: 409 ESLYDLFKTVGIDRIVTLKQHYNEDLIRQF-YATCSISRRQFRRLLNIRLDF 459


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,923,427
Number of Sequences: 37544
Number of extensions: 327842
Number of successful extensions: 602
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 602
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)