Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_C09
         (797 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81046-1|CAB02822.1|  379|Caenorhabditis elegans Hypothetical pr...    32   0.55 
Z79755-1|CAB02111.2|  358|Caenorhabditis elegans Hypothetical pr...    31   0.72 
AF025458-5|AAB70974.1|  298|Caenorhabditis elegans Squat protein...    28   8.9  

>Z81046-1|CAB02822.1|  379|Caenorhabditis elegans Hypothetical
           protein C37E2.1 protein.
          Length = 379

 Score = 31.9 bits (69), Expect = 0.55
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -1

Query: 752 LREGKVLTQDLGGKSTCTDFXKXIIKNLK 666
           ++EGKV T+DLGG +T  DF   +I   +
Sbjct: 350 VKEGKVRTRDLGGYATTVDFADAVIDKFR 378


>Z79755-1|CAB02111.2|  358|Caenorhabditis elegans Hypothetical
           protein F43G9.1 protein.
          Length = 358

 Score = 31.5 bits (68), Expect = 0.72
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -1

Query: 779 QIXAACFHXLREGKVLTQDLGGKSTCTDFXKXIIKNLK 666
           +I  A F  + +G+  T DLGG  TC+ F   +   +K
Sbjct: 318 RIEKAVFDAIADGRAKTGDLGGTGTCSSFTADVCARVK 355


>AF025458-5|AAB70974.1|  298|Caenorhabditis elegans Squat protein 2
           protein.
          Length = 298

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 695 SPCTCSCRRGPGSGPCPRAAXGN 763
           +P  CSC++GP   P P    GN
Sbjct: 101 APTCCSCQQGPAGPPGPPGDDGN 123


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,245,393
Number of Sequences: 27780
Number of extensions: 324842
Number of successful extensions: 783
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 783
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)