Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_C04
         (839 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    24   5.0  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    24   5.0  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    24   6.6  
DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfat...    24   6.6  

>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +2

Query: 275 SFAVACFPIQT*MLPDMVSKIYAFCGLKFSCLKGFDS 385
           SF++A FPI    +P  V+ +  FCGL+ + +  FD+
Sbjct: 59  SFSMA-FPINL-AVPVTVTLLLVFCGLREADVCAFDN 93


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1209

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
 Frame = +1

Query: 241  QFLSFRHGL--RFLVCGSLLPDP 303
            Q L+ RH L  RFL C   LPDP
Sbjct: 1055 QQLALRHKLVERFLPCYRYLPDP 1077


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 19/65 (29%), Positives = 26/65 (40%)
 Frame = +3

Query: 456 RTPGRLRRCSHPAPDP*LLNQEP*RILNVHIARVLVHNIDSSASVMILIPYLIGERNRFK 635
           R  G L  CS   P   L   +P   L     RV          ++ + PYL  +RN F+
Sbjct: 74  RGGGVLLACSSRYPSVALNMNQP--TLEALCIRVSFPKFRLYVGIVYVPPYLSSDRNYFE 131

Query: 636 LLNVF 650
            L+ F
Sbjct: 132 SLSAF 136


>DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfatase
           precursor protein.
          Length = 525

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +2

Query: 503 LTPEPRAVKNSERPHRSSTCPQ 568
           L P PR   + +RPH+++TC +
Sbjct: 384 LPPVPRC--DEQRPHKATTCTE 403


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 687,609
Number of Sequences: 2352
Number of extensions: 13208
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88891965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)