Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_C03
         (814 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.         145   1e-36
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.         145   1e-36
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.         145   1e-36
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.          135   2e-33
DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.        27   0.91 
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    25   3.7  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  145 bits (352), Expect = 1e-36
 Identities = 68/68 (100%), Positives = 68/68 (100%)
 Frame = -2

Query: 498 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 319
           GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 309 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 368

Query: 318 SIVHRKCF 295
           SIVHRKCF
Sbjct: 369 SIVHRKCF 376



 Score =  107 bits (257), Expect = 4e-25
 Identities = 59/103 (57%), Positives = 63/103 (61%)
 Frame = -1

Query: 808 EREIVXDIKEKLXYVAXDFEXEMXXXXXXXSLEKSYDFPTVRSSPSETKDSVAQRLSSNP 629
           EREIV DIKEKL YVA DFE EM       SLEKSY+ P  +      +          P
Sbjct: 206 EREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQP 265

Query: 628 RSWVWKLAASXETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 500
                +     ETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP
Sbjct: 266 SFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 308



 Score = 75.8 bits (178), Expect = 2e-15
 Identities = 33/33 (100%), Positives = 33/33 (100%)
 Frame = -3

Query: 698 LPDGQVITIGNERFRCPEALFQPSFLGMEACGI 600
           LPDGQVITIGNERFRCPEALFQPSFLGMEACGI
Sbjct: 243 LPDGQVITIGNERFRCPEALFQPSFLGMEACGI 275


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  145 bits (352), Expect = 1e-36
 Identities = 68/68 (100%), Positives = 68/68 (100%)
 Frame = -2

Query: 498 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 319
           GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 309 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 368

Query: 318 SIVHRKCF 295
           SIVHRKCF
Sbjct: 369 SIVHRKCF 376



 Score =  107 bits (257), Expect = 4e-25
 Identities = 59/103 (57%), Positives = 63/103 (61%)
 Frame = -1

Query: 808 EREIVXDIKEKLXYVAXDFEXEMXXXXXXXSLEKSYDFPTVRSSPSETKDSVAQRLSSNP 629
           EREIV DIKEKL YVA DFE EM       SLEKSY+ P  +      +          P
Sbjct: 206 EREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQP 265

Query: 628 RSWVWKLAASXETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 500
                +     ETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP
Sbjct: 266 SFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 308



 Score = 75.8 bits (178), Expect = 2e-15
 Identities = 33/33 (100%), Positives = 33/33 (100%)
 Frame = -3

Query: 698 LPDGQVITIGNERFRCPEALFQPSFLGMEACGI 600
           LPDGQVITIGNERFRCPEALFQPSFLGMEACGI
Sbjct: 243 LPDGQVITIGNERFRCPEALFQPSFLGMEACGI 275


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  145 bits (352), Expect = 1e-36
 Identities = 68/68 (100%), Positives = 68/68 (100%)
 Frame = -2

Query: 498 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 319
           GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 309 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 368

Query: 318 SIVHRKCF 295
           SIVHRKCF
Sbjct: 369 SIVHRKCF 376



 Score =  107 bits (257), Expect = 4e-25
 Identities = 59/103 (57%), Positives = 63/103 (61%)
 Frame = -1

Query: 808 EREIVXDIKEKLXYVAXDFEXEMXXXXXXXSLEKSYDFPTVRSSPSETKDSVAQRLSSNP 629
           EREIV DIKEKL YVA DFE EM       SLEKSY+ P  +      +          P
Sbjct: 206 EREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQP 265

Query: 628 RSWVWKLAASXETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 500
                +     ETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP
Sbjct: 266 SFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 308



 Score = 75.8 bits (178), Expect = 2e-15
 Identities = 33/33 (100%), Positives = 33/33 (100%)
 Frame = -3

Query: 698 LPDGQVITIGNERFRCPEALFQPSFLGMEACGI 600
           LPDGQVITIGNERFRCPEALFQPSFLGMEACGI
Sbjct: 243 LPDGQVITIGNERFRCPEALFQPSFLGMEACGI 275


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score =  135 bits (326), Expect = 2e-33
 Identities = 62/68 (91%), Positives = 64/68 (94%)
 Frame = -2

Query: 498 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 319
           GIADRMQKEIT+LAPST+KIKIIAPPERKYSVWIGGSILASLSTFQ MWISK EYDE GP
Sbjct: 309 GIADRMQKEITSLAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQTMWISKHEYDEGGP 368

Query: 318 SIVHRKCF 295
            IVHRKCF
Sbjct: 369 GIVHRKCF 376



 Score =  101 bits (242), Expect = 3e-23
 Identities = 56/103 (54%), Positives = 62/103 (60%)
 Frame = -1

Query: 808 EREIVXDIKEKLXYVAXDFEXEMXXXXXXXSLEKSYDFPTVRSSPSETKDSVAQRLSSNP 629
           EREIV DIKEKL YVA DFE EM       S EKSY+ P  +      +   A      P
Sbjct: 206 EREIVRDIKEKLCYVALDFEQEMQAAAASSSSEKSYELPDGQVITIGNERFRAPEALFQP 265

Query: 628 RSWVWKLAASXETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 500
                +     ET YNSIM+CDVDIRKDLYAN+VLSGGTTMYP
Sbjct: 266 SFLGMESTGIHETVYNSIMRCDVDIRKDLYANSVLSGGTTMYP 308


>DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.
          Length = 418

 Score = 26.6 bits (56), Expect = 0.91
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -3

Query: 338 STTSLAPPLYTGSASKRTARRCLQQPAAGCSIQA 237
           S  +L   LY GSAS+    R LQQ  +G + QA
Sbjct: 70  SVKALLALLYEGSASRSETERELQQALSGGNSQA 103


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = +3

Query: 552 RMSTSHFMMELYVVSXDAASFHTQERGLEESL 647
           R  T HF  EL+ V+ D ASF T+     ESL
Sbjct: 235 RWRTRHFDAELFGVALDVASF-TERVTSAESL 265


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 771,673
Number of Sequences: 2352
Number of extensions: 16707
Number of successful extensions: 53
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86071221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)