Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_C02
         (829 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40956-4|AAA81759.1|  262|Caenorhabditis elegans Hypothetical pr...    30   1.8  
U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical pr...    30   1.8  
U97551-3|AAB52860.2|  215|Caenorhabditis elegans Hypothetical pr...    30   2.3  
AF016674-7|AAB66126.2|  415|Caenorhabditis elegans C-type lectin...    28   9.4  
AC084158-20|AAK68572.1|  130|Caenorhabditis elegans Hypothetical...    28   9.4  

>U40956-4|AAA81759.1|  262|Caenorhabditis elegans Hypothetical
           protein ZK402.1 protein.
          Length = 262

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -2

Query: 444 FHPKLSHVISFHFMLIN*CFKLIKFISFRSISFVIK 337
           + P     IS+HF  I   F +IKFI   S+SF++K
Sbjct: 163 YFPIFPSTISYHFFCIL-TFHIIKFILITSVSFLLK 197


>U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical protein
            F30H5.3 protein.
          Length = 1599

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = -3

Query: 314  CMV*YLCTFSWKNKNYYYC 258
            C   Y CTFS K+KNYY C
Sbjct: 1431 CPSGYKCTFSKKSKNYYCC 1449


>U97551-3|AAB52860.2|  215|Caenorhabditis elegans Hypothetical
           protein T01B10.5 protein.
          Length = 215

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 12/48 (25%), Positives = 27/48 (56%)
 Frame = -2

Query: 444 FHPKLSHVISFHFMLIN*CFKLIKFISFRSISFVIKRNTKKIRLYGMI 301
           +HP+LS ++ FHF+L    ++++  +S    +  +  NT  I  + ++
Sbjct: 51  YHPELSGIVGFHFLLPIFVYQILWLLSNIGSAVTVHTNTPYIFFFTLL 98


>AF016674-7|AAB66126.2|  415|Caenorhabditis elegans C-type lectin
           protein 10 protein.
          Length = 415

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
 Frame = -3

Query: 536 EASGRSYFVSLPSIKSTEKSQ*IATIL--LKLYFIPNCLMSFHFISC*LIDVSN*SNSFH 363
           E S R+Y  +L ++K+ + +Q +ATI    KL ++        F  C   D S  +NS++
Sbjct: 49  ELSCRNYGATLVTVKNAQDNQDVATIAGSAKLIWLGLSCFEDSFGKCFWDDASGSANSYN 108

Query: 362 S 360
           S
Sbjct: 109 S 109


>AC084158-20|AAK68572.1|  130|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.27 protein.
          Length = 130

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 11/43 (25%), Positives = 25/43 (58%)
 Frame = -2

Query: 441 HPKLSHVISFHFMLIN*CFKLIKFISFRSISFVIKRNTKKIRL 313
           HP  +H +      ++  F L+ F++ + I F+ K+N K++++
Sbjct: 83  HPAWTHCLGLIQSHLSHLFVLLTFLTLKCIYFLKKKNLKRMKI 125


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,659,720
Number of Sequences: 27780
Number of extensions: 304916
Number of successful extensions: 633
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 633
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)