Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_B24
         (947 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   0.83 
AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.            25   4.4  
CR954257-7|CAJ14158.1|  284|Anopheles gambiae signal sequence re...    24   7.7  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.1 bits (57), Expect = 0.83
 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = -3

Query: 228 PKITPVPVPVLDVSQRKSKKRRTISPVASESSGEEYDPSRG-DTAAAMSV 82
           P   P+PVP+  +   K+   +  S  A E   E+ D  R  DT A M V
Sbjct: 637 PLPLPIPVPIPVIDFLKAALPKGESEKADEKRAEQKDEQRATDTTAVMLV 686


>AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.
          Length = 438

 Score = 24.6 bits (51), Expect = 4.4
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +1

Query: 64  PGFRCGDTHGCCG 102
           PG  CGDTHG  G
Sbjct: 278 PGKSCGDTHGQVG 290


>CR954257-7|CAJ14158.1|  284|Anopheles gambiae signal sequence
           receptor protein.
          Length = 284

 Score = 23.8 bits (49), Expect = 7.7
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = -3

Query: 321 ARKTESTTTYQSQIIDTNSIKIKIRRTSLHEPKITPVPVPVLDVSQRKSK 172
           ARK   T T  ++ +D   I  +  +   + PK  P   P     QRK+K
Sbjct: 233 ARKVVETGTASTKDVDYEWIPSETLKQLQNSPKGAPKSSPKQSPRQRKAK 282


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 594,167
Number of Sequences: 2352
Number of extensions: 9504
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 103776201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)