Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_B24
(947 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81527-6|CAB04275.1| 739|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 32 0.69
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 32 0.69
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 32 0.69
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 32 0.69
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 32 0.69
Z49131-3|CAA88976.1| 1211|Caenorhabditis elegans Hypothetical pr... 30 2.1
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 30 2.1
Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical pr... 29 6.4
U61948-6|AAB03142.1| 497|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z70718-5|CAA94670.1| 197|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z69634-6|CAD01081.2| 490|Caenorhabditis elegans Hypothetical pr... 28 8.5
>Z81527-6|CAB04275.1| 739|Caenorhabditis elegans Hypothetical
protein F35E12.7a protein.
Length = 739
Score = 34.3 bits (75), Expect = 0.13
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 8/110 (7%)
Frame = -3
Query: 381 TPCSGKPRSMLNICSRSKKKARKTESTTTYQ-----SQIIDTNSIKI---KIRRTSLHEP 226
+P + K + +N+ S + K R +STTTYQ S T I I I S+ P
Sbjct: 531 SPITSKTTTSINVSSSTTKSTRPMQSTTTYQKLAQASSTASTTPIPITTQNISTASIATP 590
Query: 225 KITPVPVPVLDVSQRKSKKRRTISPVASESSGEEYDPSRGDTAAAMSVAA 76
T P+ ++ R S + +SP+ S Y + T+AA S +A
Sbjct: 591 S-TKTPITPSLITTRSSTTK--LSPIVITKSSLAYTAT--PTSAAPSTSA 635
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 31.9 bits (69), Expect = 0.69
Identities = 14/62 (22%), Positives = 32/62 (51%)
Frame = -3
Query: 414 KDSKERRTHAITPCSGKPRSMLNICSRSKKKARKTESTTTYQSQIIDTNSIKIKIRRTSL 235
KD +E THA+T + + +KK+ R+ E + Q+++ + ++ ++ T+L
Sbjct: 2407 KDKREEMTHAVTTLNETRNDVAEALEAAKKRVRRDEKSV--DMQLVNAKAHELHLQATTL 2464
Query: 234 HE 229
+
Sbjct: 2465 RQ 2466
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 31.9 bits (69), Expect = 0.69
Identities = 14/62 (22%), Positives = 32/62 (51%)
Frame = -3
Query: 414 KDSKERRTHAITPCSGKPRSMLNICSRSKKKARKTESTTTYQSQIIDTNSIKIKIRRTSL 235
KD +E THA+T + + +KK+ R+ E + Q+++ + ++ ++ T+L
Sbjct: 2407 KDKREEMTHAVTTLNETRNDVAEALEAAKKRVRRDEKSV--DMQLVNAKAHELHLQATTL 2464
Query: 234 HE 229
+
Sbjct: 2465 RQ 2466
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 31.9 bits (69), Expect = 0.69
Identities = 14/62 (22%), Positives = 32/62 (51%)
Frame = -3
Query: 414 KDSKERRTHAITPCSGKPRSMLNICSRSKKKARKTESTTTYQSQIIDTNSIKIKIRRTSL 235
KD +E THA+T + + +KK+ R+ E + Q+++ + ++ ++ T+L
Sbjct: 221 KDKREEMTHAVTTLNETRNDVAEALEAAKKRVRRDEKSV--DMQLVNAKAHELHLQATTL 278
Query: 234 HE 229
+
Sbjct: 279 RQ 280
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 31.9 bits (69), Expect = 0.69
Identities = 14/62 (22%), Positives = 32/62 (51%)
Frame = -3
Query: 414 KDSKERRTHAITPCSGKPRSMLNICSRSKKKARKTESTTTYQSQIIDTNSIKIKIRRTSL 235
KD +E THA+T + + +KK+ R+ E + Q+++ + ++ ++ T+L
Sbjct: 2407 KDKREEMTHAVTTLNETRNDVAEALEAAKKRVRRDEKSV--DMQLVNAKAHELHLQATTL 2464
Query: 234 HE 229
+
Sbjct: 2465 RQ 2466
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 31.9 bits (69), Expect = 0.69
Identities = 14/62 (22%), Positives = 32/62 (51%)
Frame = -3
Query: 414 KDSKERRTHAITPCSGKPRSMLNICSRSKKKARKTESTTTYQSQIIDTNSIKIKIRRTSL 235
KD +E THA+T + + +KK+ R+ E + Q+++ + ++ ++ T+L
Sbjct: 2407 KDKREEMTHAVTTLNETRNDVAEALEAAKKRVRRDEKSV--DMQLVNAKAHELHLQATTL 2464
Query: 234 HE 229
+
Sbjct: 2465 RQ 2466
>Z49131-3|CAA88976.1| 1211|Caenorhabditis elegans Hypothetical
protein ZC373.4 protein.
Length = 1211
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/97 (25%), Positives = 43/97 (44%)
Frame = -3
Query: 426 KKSKKDSKERRTHAITPCSGKPRSMLNICSRSKKKARKTESTTTYQSQIIDTNSIKIKIR 247
KKS KE +T ++ K + +I + +K +K + TTT ++I S+
Sbjct: 590 KKSSASVKETKTVELSVVPVKLEKLASIDEKGEKLVKKKKKTTTVTAEIEKPKSVIESKE 649
Query: 246 RTSLHEPKITPVPVPVLDVSQRKSKKRRTISPVASES 136
+ +PK+ + VS K+R S ASE+
Sbjct: 650 EKLVEKPKLLNGTL----VSDALEKRRSLGSKRASET 682
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 30.3 bits (65), Expect = 2.1
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
Frame = -3
Query: 426 KKSKKDSK-ERRTHAITPCSGKPRSMLNICSRSKKKARKTESTTTYQSQIIDTNSIKI-- 256
KKSKK K E+R A+ S + KK++K ++ + + + +S K
Sbjct: 265 KKSKKFKKSEKRKRAVNDSSSDDEDEEEKPEKRSKKSKKAVIDSSSEDEEEEKSSKKRSK 324
Query: 255 KIRRTSLHEPKITPVPVPVLDV-----SQRKSKKRRTISPVASESSGEE 124
K ++ S E + + V++V S +K+ K+ + + ESSG+E
Sbjct: 325 KSKKESDEEQQASDSEEEVVEVKKNSKSPKKTPKKTAVKEESEESSGDE 373
>Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical
protein B0285.1 protein.
Length = 730
Score = 28.7 bits (61), Expect = 6.4
Identities = 22/74 (29%), Positives = 39/74 (52%)
Frame = -3
Query: 339 SRSKKKARKTESTTTYQSQIIDTNSIKIKIRRTSLHEPKITPVPVPVLDVSQRKSKKRRT 160
S S KK+++ S+ + S ++DT S+ ++++ + S++KS+KRR
Sbjct: 112 SGSSKKSKRRNSSGSSSSDLMDT-SLMSELKKHGDYGSS---------SKSKKKSRKRRK 161
Query: 159 ISPVASESSGEEYD 118
S +S SSGE D
Sbjct: 162 HSSSSSSSSGEAMD 175
>U61948-6|AAB03142.1| 497|Caenorhabditis elegans Hypothetical
protein C46A5.1 protein.
Length = 497
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = -3
Query: 405 KERRTHAITPCSGKPRSMLNICSRSKKKARKTESTTT 295
K + + + KP++ L+ C + KKK++K++S T
Sbjct: 31 KHHKRKSRSKSKNKPKNGLSCCRKKKKKSKKSKSKVT 67
>Z70718-5|CAA94670.1| 197|Caenorhabditis elegans Hypothetical
protein C04G2.8 protein.
Length = 197
Score = 28.3 bits (60), Expect = 8.5
Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Frame = -3
Query: 426 KKSKKDSKERRTHAITPCSGKPRSMLNIC-SRSKKKARKTESTTTYQSQIIDTNSIKIKI 250
K +DSK R TP + R++++ SRS +AR++ S S+ I S+
Sbjct: 10 KLRPRDSKGR----FTPLAKTKRTVVSRSRSRSASRARRSRSVGRPASRRISVRSVSTHT 65
Query: 249 RRTSLHEPKITPVPVPVLDVSQRKSKKRRTISPVASESSGEEYDPSRG 106
++ I+P P + R S RR++ AS S SRG
Sbjct: 66 AKSPSLVVVISPSPRRRRSSTSRSS--RRSVVRSASRGSVSRRSSSRG 111
>Z69634-6|CAD01081.2| 490|Caenorhabditis elegans Hypothetical
protein B0001.8 protein.
Length = 490
Score = 28.3 bits (60), Expect = 8.5
Identities = 27/107 (25%), Positives = 44/107 (41%)
Frame = -3
Query: 432 LPKKSKKDSKERRTHAITPCSGKPRSMLNICSRSKKKARKTESTTTYQSQIIDTNSIKIK 253
+P + + S RR+ + RS R+ ++ STT+ S+ T+S
Sbjct: 263 IPNEHNRPSNLRRSRSAERRRSPTRSYRGASPRNLARSNSGLSTTSKISRAPTTDSEDSD 322
Query: 252 IRRTSLHEPKITPVPVPVLDVSQRKSKKRRTISPVASESSGEEYDPS 112
+ K TP+ L + +KK R +SP S S E+ D S
Sbjct: 323 DDAAGFNRTKETPI----LRDQKPTAKKERPVSP-KSSSDSEDSDAS 364
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,445,073
Number of Sequences: 27780
Number of extensions: 240055
Number of successful extensions: 857
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2454664212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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