Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_B20
         (793 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0966 - 24906361-24906958,24907084-24907250,24907403-249076...    35   0.085
03_04_0056 + 16898169-16898181,16898683-16898758,16898871-168989...    32   0.45 
02_04_0203 - 20888010-20888162,20888242-20888469,20888969-208890...    31   1.0  
12_01_0741 + 6649988-6653065                                           30   1.8  
12_01_0686 - 5855216-5858263                                           29   4.2  
04_04_0655 + 26974366-26974398,26974480-26974899,26975023-26975859     28   7.4  
01_07_0355 - 42973861-42974303,42974821-42974925,42975338-429754...    28   9.8  

>12_02_0966 -
           24906361-24906958,24907084-24907250,24907403-24907650,
           24907824-24908001,24908196-24908372,24908459-24908563,
           24908633-24908770,24909757-24910836
          Length = 896

 Score = 34.7 bits (76), Expect = 0.085
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +1

Query: 37  PGRFRFTNQPGRWRG-SRYLGYLYCNYTGTFWRERDESSCMIC 162
           P R   +  P  WRG S+  G   C   G+FW   D+ +C+ C
Sbjct: 203 PVRSSGSLSPAHWRGASKSRGCFRCGKGGSFWARGDKEACLAC 245


>03_04_0056 +
           16898169-16898181,16898683-16898758,16898871-16898916,
           16899013-16899127,16899217-16899296,16899373-16899966,
           16900059-16900163,16900569-16900907
          Length = 455

 Score = 32.3 bits (70), Expect = 0.45
 Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
 Frame = +1

Query: 481 TCRPQRLGGTALNITH-QRHTIHRSVWTYNRRRLQIIQSSDLKLGIDTLGTPRPA-IKTK 654
           T RP  L   +  +T+ + + ++  VWT+N+R   ++Q  D K G+    T R A IK +
Sbjct: 142 TDRPGLLSEVSAVLTNLECNVVNAEVWTHNKRAAAVMQVMDRKTGLAISDTQRLARIKER 201

Query: 655 L 657
           L
Sbjct: 202 L 202


>02_04_0203 -
           20888010-20888162,20888242-20888469,20888969-20889073,
           20889148-20889225,20889308-20889382,20890037-20890123,
           20890216-20890283,20890396-20890483,20890583-20890683,
           20890793-20890913,20891008-20891169,20891271-20891441
          Length = 478

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -2

Query: 132 PPKSPRVVAV*IT*IPTAAPSAG-LICESKPSRAPQK 25
           PP  PRV A      P  + SAG L   S+PSR PQK
Sbjct: 22  PPPRPRVSAAAAASFPCCSTSAGGLRLRSRPSRFPQK 58


>12_01_0741 + 6649988-6653065
          Length = 1025

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 16/73 (21%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
 Frame = +1

Query: 310 KNWYPPAGFEHRCIATYECTGRLILXAMTSNIRESFVLSRSNLSRSSF---VPFAANSCP 480
           + W+PP  F+H  + T   T  L +     N     VL   ++S ++F   +P + ++  
Sbjct: 299 EGWFPPIIFQHEKLTTINLTKNLGISGNLPNFSGESVLQSISVSNTNFSGTIPSSISNLK 358

Query: 481 TCRPQRLGGTALN 519
           + +   LG +  +
Sbjct: 359 SLKKLALGASGFS 371


>12_01_0686 - 5855216-5858263
          Length = 1015

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 15/66 (22%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = +1

Query: 310 KNWYPPAGFEHRCIATYECTGRLILXAMTSNIRESFVLSRSNLSRSSFVPFAANSCPTCR 489
           + W+PP  F+H+ + T + +    +     N  +   L   ++SR++F     +S    R
Sbjct: 303 QGWFPPIIFQHKKLRTIDLSKNPGISGNLPNFSQDSSLENLSVSRTNFTGMIPSSISNLR 362

Query: 490 P-QRLG 504
             ++LG
Sbjct: 363 SLKKLG 368


>04_04_0655 + 26974366-26974398,26974480-26974899,26975023-26975859
          Length = 429

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = +1

Query: 40  GRFRFTNQPGRWRGSRYLGYLYCNYTGTFWRERD 141
           GRF      G W     L +L C Y G FW E+D
Sbjct: 19  GRFLSLCLLGFWNFGN-LWFLLCVYVGAFWTEKD 51


>01_07_0355 -
           42973861-42974303,42974821-42974925,42975338-42975461,
           42975601-42975743,42975896-42976031,42976112-42976434,
           42976942-42976999
          Length = 443

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +2

Query: 260 GCEFVHSSKKKYVYFTRKIGTRLRDSNTGASL 355
           G  F+HS K K +Y   K    L DSN  A L
Sbjct: 195 GLAFLHSDKAKVIYRDFKTSNVLLDSNYNAKL 226


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,988,923
Number of Sequences: 37544
Number of extensions: 486114
Number of successful extensions: 1115
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1114
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)