Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_B19
         (765 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371...    34   0.14 
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249...    33   0.19 
01_01_0682 - 5244805-5244919,5246468-5246613,5246813-5246994,524...    31   1.3  
08_01_0397 - 3509186-3510291,3510322-3512335                           29   4.1  
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204...    29   4.1  

>01_01_0509 -
           3713109-3713244,3713689-3713733,3713959-3714015,
           3714088-3714438,3714585-3714862,3714939-3715289,
           3715378-3715647,3716035-3716103,3716194-3716304,
           3716503-3716583,3716825-3716914,3717032-3717262
          Length = 689

 Score = 33.9 bits (74), Expect = 0.14
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = -3

Query: 640 FLTPSNSRQAKDLVSVLQEANQIISPQLQSMADR 539
           F    +S+ A DLV +L+ ANQ +S QL+ M  R
Sbjct: 527 FFCDQDSKYASDLVKILEGANQSVSQQLRDMVSR 560


>11_06_0767 + 27121761-27123335,27123701-27123910,27124843-27124911,
            27125387-27125656,27126027-27126377,27126480-27126757,
            27126887-27128330
          Length = 1398

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = -3

Query: 640  FLTPSNSRQAKDLVSVLQEANQIISPQLQSMADR 539
            F +  + + A DLV VL+ ANQ + P+LQ MA R
Sbjct: 951  FFSEQDWKYAGDLVKVLEGANQHVPPELQEMAAR 984


>01_01_0682 -
           5244805-5244919,5246468-5246613,5246813-5246994,
           5247069-5247295,5247382-5247467,5247564-5247656,
           5247964-5248118,5248407-5248490,5248589-5248768,
           5249587-5249828,5249927-5249982
          Length = 521

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 12/22 (54%), Positives = 18/22 (81%)
 Frame = -3

Query: 640 FLTPSNSRQAKDLVSVLQEANQ 575
           F T +N+R AKDL+++L+EA Q
Sbjct: 413 FFTAANARFAKDLINILEEAGQ 434


>08_01_0397 - 3509186-3510291,3510322-3512335
          Length = 1039

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -3

Query: 646 ICFLTPSNSRQAKDLVSVLQEANQIISPQLQSMADR 539
           + F++    R A DLV  L+ + Q +   L+ +ADR
Sbjct: 762 VTFISEEEERYAPDLVKALELSEQAVPEDLKGLADR 797


>01_05_0292 +
           20518668-20519090,20519213-20519281,20520204-20520473,
           20520734-20521084,20521251-20521528,20522755-20523099,
           20523346-20523911,20525155-20525528
          Length = 891

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -3

Query: 640 FLTPSNSRQAKDLVSVLQEANQIISPQLQSMADR 539
           F    +S+ A DL+ +L+ ANQ +   L  MA R
Sbjct: 497 FFCDQDSKYAADLIKILEGANQRVPRDLADMASR 530


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,585,041
Number of Sequences: 37544
Number of extensions: 302302
Number of successful extensions: 581
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 580
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)