Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_B19
         (765 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z97056-3|CAB09792.1|  650|Homo sapiens DEAD (Asp-Glu-Ala-Asp) bo...    49   2e-05
U59321-1|AAC50787.1|  650|Homo sapiens DEAD-box protein p72 prot...    49   2e-05
CR456432-1|CAG30318.1|  652|Homo sapiens DDX17 protein.                49   2e-05
BC000595-1|AAH00595.2|  729|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ...    49   2e-05
AB209595-1|BAD92832.1|  737|Homo sapiens DEAD box polypeptide 17...    49   2e-05
X52104-1|CAA36324.1|  614|Homo sapiens protein ( Human mRNA for ...    48   4e-05
X15729-1|CAA33751.1|  614|Homo sapiens protein ( Human mRNA for ...    48   4e-05
BT006943-1|AAP35589.1|  614|Homo sapiens DEAD/H (Asp-Glu-Ala-Asp...    48   4e-05
BC016027-1|AAH16027.1|  614|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ...    48   4e-05
AF015812-1|AAB84094.1|  614|Homo sapiens RNA helicase p68 protein.     48   4e-05
BC066938-1|AAH66938.1|  648|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ...    33   1.1  
AJ278110-1|CAB92442.1|  648|Homo sapiens DEAD-box protein protein.     33   1.1  

>Z97056-3|CAB09792.1|  650|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
           polypeptide 17 protein.
          Length = 650

 Score = 48.8 bits (111), Expect = 2e-05
 Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
 Frame = -3

Query: 715 YPNSSEXTSIVLGELTFXI-KRNIICFLTPSNSRQAKDLVSVLQEANQIISPQLQSMAD 542
           YPNSSE     +G       K     F TP N +QA++L+ VL+EANQ I+P+L  + D
Sbjct: 416 YPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVD 474


>U59321-1|AAC50787.1|  650|Homo sapiens DEAD-box protein p72
           protein.
          Length = 650

 Score = 48.8 bits (111), Expect = 2e-05
 Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
 Frame = -3

Query: 715 YPNSSEXTSIVLGELTFXI-KRNIICFLTPSNSRQAKDLVSVLQEANQIISPQLQSMAD 542
           YPNSSE     +G       K     F TP N +QA++L+ VL+EANQ I+P+L  + D
Sbjct: 416 YPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVD 474


>CR456432-1|CAG30318.1|  652|Homo sapiens DDX17 protein.
          Length = 652

 Score = 48.8 bits (111), Expect = 2e-05
 Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
 Frame = -3

Query: 715 YPNSSEXTSIVLGELTFXI-KRNIICFLTPSNSRQAKDLVSVLQEANQIISPQLQSMAD 542
           YPNSSE     +G       K     F TP N +QA++L+ VL+EANQ I+P+L  + D
Sbjct: 416 YPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVD 474


>BC000595-1|AAH00595.2|  729|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
           polypeptide 17 protein.
          Length = 729

 Score = 48.8 bits (111), Expect = 2e-05
 Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
 Frame = -3

Query: 715 YPNSSEXTSIVLGELTFXI-KRNIICFLTPSNSRQAKDLVSVLQEANQIISPQLQSMAD 542
           YPNSSE     +G       K     F TP N +QA++L+ VL+EANQ I+P+L  + D
Sbjct: 495 YPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVD 553


>AB209595-1|BAD92832.1|  737|Homo sapiens DEAD box polypeptide 17
           isoform p82 variant protein.
          Length = 737

 Score = 48.8 bits (111), Expect = 2e-05
 Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
 Frame = -3

Query: 715 YPNSSEXTSIVLGELTFXI-KRNIICFLTPSNSRQAKDLVSVLQEANQIISPQLQSMAD 542
           YPNSSE     +G       K     F TP N +QA++L+ VL+EANQ I+P+L  + D
Sbjct: 497 YPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVD 555


>X52104-1|CAA36324.1|  614|Homo sapiens protein ( Human mRNA for p68
           protein. ).
          Length = 614

 Score = 48.0 bits (109), Expect = 4e-05
 Identities = 28/61 (45%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
 Frame = -3

Query: 715 YPNSSEXTSIVLGELTFXIKRNII-CFLTPSNSRQAKDLVSVLQEANQIISPQ-LQSMAD 542
           YPNSSE     +G      K      F TP+N +Q  DL+SVL+EANQ I+P+ LQ + D
Sbjct: 418 YPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVED 477

Query: 541 R 539
           R
Sbjct: 478 R 478


>X15729-1|CAA33751.1|  614|Homo sapiens protein ( Human mRNA for
           nuclear p68 protein. ).
          Length = 614

 Score = 48.0 bits (109), Expect = 4e-05
 Identities = 28/61 (45%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
 Frame = -3

Query: 715 YPNSSEXTSIVLGELTFXIKRNII-CFLTPSNSRQAKDLVSVLQEANQIISPQ-LQSMAD 542
           YPNSSE     +G      K      F TP+N +Q  DL+SVL+EANQ I+P+ LQ + D
Sbjct: 418 YPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVED 477

Query: 541 R 539
           R
Sbjct: 478 R 478


>BT006943-1|AAP35589.1|  614|Homo sapiens DEAD/H
           (Asp-Glu-Ala-Asp/His) box polypeptide 5 (RNA helicase,
           68kDa) protein.
          Length = 614

 Score = 48.0 bits (109), Expect = 4e-05
 Identities = 28/61 (45%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
 Frame = -3

Query: 715 YPNSSEXTSIVLGELTFXIKRNII-CFLTPSNSRQAKDLVSVLQEANQIISPQ-LQSMAD 542
           YPNSSE     +G      K      F TP+N +Q  DL+SVL+EANQ I+P+ LQ + D
Sbjct: 418 YPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVED 477

Query: 541 R 539
           R
Sbjct: 478 R 478


>BC016027-1|AAH16027.1|  614|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
           polypeptide 5 protein.
          Length = 614

 Score = 48.0 bits (109), Expect = 4e-05
 Identities = 28/61 (45%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
 Frame = -3

Query: 715 YPNSSEXTSIVLGELTFXIKRNII-CFLTPSNSRQAKDLVSVLQEANQIISPQ-LQSMAD 542
           YPNSSE     +G      K      F TP+N +Q  DL+SVL+EANQ I+P+ LQ + D
Sbjct: 418 YPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVED 477

Query: 541 R 539
           R
Sbjct: 478 R 478


>AF015812-1|AAB84094.1|  614|Homo sapiens RNA helicase p68 protein.
          Length = 614

 Score = 48.0 bits (109), Expect = 4e-05
 Identities = 28/61 (45%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
 Frame = -3

Query: 715 YPNSSEXTSIVLGELTFXIKRNII-CFLTPSNSRQAKDLVSVLQEANQIISPQ-LQSMAD 542
           YPNSSE     +G      K      F TP+N +Q  DL+SVL+EANQ I+P+ LQ + D
Sbjct: 418 YPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVED 477

Query: 541 R 539
           R
Sbjct: 478 R 478


>BC066938-1|AAH66938.1|  648|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
           polypeptide 43 protein.
          Length = 648

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 16/36 (44%), Positives = 25/36 (69%)
 Frame = -3

Query: 646 ICFLTPSNSRQAKDLVSVLQEANQIISPQLQSMADR 539
           I  LT ++ R A +L+++L+ ANQ I  +L SMA+R
Sbjct: 588 ITTLTRNDWRVASELINILERANQSIPEELVSMAER 623


>AJ278110-1|CAB92442.1|  648|Homo sapiens DEAD-box protein protein.
          Length = 648

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 16/36 (44%), Positives = 25/36 (69%)
 Frame = -3

Query: 646 ICFLTPSNSRQAKDLVSVLQEANQIISPQLQSMADR 539
           I  LT ++ R A +L+++L+ ANQ I  +L SMA+R
Sbjct: 588 ITTLTRNDWRVASELINILERANQSIPEELVSMAER 623


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,158,454
Number of Sequences: 237096
Number of extensions: 1768756
Number of successful extensions: 2898
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2888
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9199990470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)