Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_B19
(765 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52846-1|CAA37037.1| 575|Drosophila melanogaster protein ( Dros... 42 7e-04
BT015209-1|AAT94438.1| 575|Drosophila melanogaster RE56857p pro... 42 7e-04
BT011476-1|AAR99134.1| 719|Drosophila melanogaster RE11923p pro... 42 7e-04
BT001716-1|AAN71471.1| 578|Drosophila melanogaster RE68337p pro... 42 7e-04
AE014297-394|AAG22212.1| 578|Drosophila melanogaster CG10279-PF... 42 7e-04
AE014297-393|AAN14332.1| 578|Drosophila melanogaster CG10279-PC... 42 7e-04
AE014297-392|AAF51926.2| 578|Drosophila melanogaster CG10279-PB... 42 7e-04
AE014297-391|AAF51927.2| 578|Drosophila melanogaster CG10279-PE... 42 7e-04
AE014297-390|AAN14331.1| 575|Drosophila melanogaster CG10279-PD... 42 7e-04
AE014297-389|AAG22213.2| 719|Drosophila melanogaster CG10279-PA... 42 7e-04
AY102660-1|AAM27489.1| 818|Drosophila melanogaster GH10652p pro... 39 0.007
AE014296-1163|AAF50635.2| 818|Drosophila melanogaster CG10077-P... 39 0.007
AY060404-1|AAL25443.1| 945|Drosophila melanogaster LD32873p pro... 39 0.009
AE014298-1087|AAF46295.1| 945|Drosophila melanogaster CG10777-P... 39 0.009
AY069097-1|AAL39242.1| 813|Drosophila melanogaster GH11602p pro... 29 7.0
AF029776-1|AAC39102.1| 813|Drosophila melanogaster GCN5 protein. 29 7.0
AE014296-2156|AAF49904.1| 813|Drosophila melanogaster CG4107-PA... 29 7.0
>X52846-1|CAA37037.1| 575|Drosophila melanogaster protein (
Drosophila melanogasterRM62 mRNA for novel RNA helicase.
).
Length = 575
Score = 42.3 bits (95), Expect = 7e-04
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = -3
Query: 715 YPNSSEXTSIVLGEL-TFXIKRNIICFLTPSNSRQAKDLVSVLQEANQIISPQLQSMA 545
YP +SE +G K F T +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 463 YPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 520
>BT015209-1|AAT94438.1| 575|Drosophila melanogaster RE56857p
protein.
Length = 575
Score = 42.3 bits (95), Expect = 7e-04
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = -3
Query: 715 YPNSSEXTSIVLGEL-TFXIKRNIICFLTPSNSRQAKDLVSVLQEANQIISPQLQSMA 545
YP +SE +G K F T +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 463 YPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 520
>BT011476-1|AAR99134.1| 719|Drosophila melanogaster RE11923p
protein.
Length = 719
Score = 42.3 bits (95), Expect = 7e-04
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = -3
Query: 715 YPNSSEXTSIVLGEL-TFXIKRNIICFLTPSNSRQAKDLVSVLQEANQIISPQLQSMA 545
YP +SE +G K F T +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 607 YPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 664
>BT001716-1|AAN71471.1| 578|Drosophila melanogaster RE68337p
protein.
Length = 578
Score = 42.3 bits (95), Expect = 7e-04
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = -3
Query: 715 YPNSSEXTSIVLGEL-TFXIKRNIICFLTPSNSRQAKDLVSVLQEANQIISPQLQSMA 545
YP +SE +G K F T +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 466 YPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 523
>AE014297-394|AAG22212.1| 578|Drosophila melanogaster CG10279-PF,
isoform F protein.
Length = 578
Score = 42.3 bits (95), Expect = 7e-04
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = -3
Query: 715 YPNSSEXTSIVLGEL-TFXIKRNIICFLTPSNSRQAKDLVSVLQEANQIISPQLQSMA 545
YP +SE +G K F T +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 466 YPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 523
>AE014297-393|AAN14332.1| 578|Drosophila melanogaster CG10279-PC,
isoform C protein.
Length = 578
Score = 42.3 bits (95), Expect = 7e-04
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = -3
Query: 715 YPNSSEXTSIVLGEL-TFXIKRNIICFLTPSNSRQAKDLVSVLQEANQIISPQLQSMA 545
YP +SE +G K F T +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 466 YPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 523
>AE014297-392|AAF51926.2| 578|Drosophila melanogaster CG10279-PB,
isoform B protein.
Length = 578
Score = 42.3 bits (95), Expect = 7e-04
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = -3
Query: 715 YPNSSEXTSIVLGEL-TFXIKRNIICFLTPSNSRQAKDLVSVLQEANQIISPQLQSMA 545
YP +SE +G K F T +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 466 YPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 523
>AE014297-391|AAF51927.2| 578|Drosophila melanogaster CG10279-PE,
isoform E protein.
Length = 578
Score = 42.3 bits (95), Expect = 7e-04
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = -3
Query: 715 YPNSSEXTSIVLGEL-TFXIKRNIICFLTPSNSRQAKDLVSVLQEANQIISPQLQSMA 545
YP +SE +G K F T +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 466 YPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 523
>AE014297-390|AAN14331.1| 575|Drosophila melanogaster CG10279-PD,
isoform D protein.
Length = 575
Score = 42.3 bits (95), Expect = 7e-04
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = -3
Query: 715 YPNSSEXTSIVLGEL-TFXIKRNIICFLTPSNSRQAKDLVSVLQEANQIISPQLQSMA 545
YP +SE +G K F T +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 463 YPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 520
>AE014297-389|AAG22213.2| 719|Drosophila melanogaster CG10279-PA,
isoform A protein.
Length = 719
Score = 42.3 bits (95), Expect = 7e-04
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = -3
Query: 715 YPNSSEXTSIVLGEL-TFXIKRNIICFLTPSNSRQAKDLVSVLQEANQIISPQLQSMA 545
YP +SE +G K F T +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 607 YPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 664
>AY102660-1|AAM27489.1| 818|Drosophila melanogaster GH10652p
protein.
Length = 818
Score = 39.1 bits (87), Expect = 0.007
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = -3
Query: 634 TPSNSRQAKDLVSVLQEANQIISPQLQSMA 545
T SN+ +A DL+ VL+EANQ I+P+L +MA
Sbjct: 509 THSNANKANDLIQVLREANQTINPKLMNMA 538
>AE014296-1163|AAF50635.2| 818|Drosophila melanogaster CG10077-PA,
isoform A protein.
Length = 818
Score = 39.1 bits (87), Expect = 0.007
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = -3
Query: 634 TPSNSRQAKDLVSVLQEANQIISPQLQSMA 545
T SN+ +A DL+ VL+EANQ I+P+L +MA
Sbjct: 509 THSNANKANDLIQVLREANQTINPKLMNMA 538
>AY060404-1|AAL25443.1| 945|Drosophila melanogaster LD32873p
protein.
Length = 945
Score = 38.7 bits (86), Expect = 0.009
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = -3
Query: 715 YPNSSEXTSIVLGELTFXIKRNII-CFLTPSNSRQAKDLVSVLQEANQIISPQLQSMA 545
YPNSSE +G + F TP N++QA++L+SVL+EA Q S L +A
Sbjct: 568 YPNSSENYVHRIGRTGRCQQLGTAYTFFTPDNAKQARELISVLEEAGQTPSQALLDLA 625
>AE014298-1087|AAF46295.1| 945|Drosophila melanogaster CG10777-PB
protein.
Length = 945
Score = 38.7 bits (86), Expect = 0.009
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = -3
Query: 715 YPNSSEXTSIVLGELTFXIKRNII-CFLTPSNSRQAKDLVSVLQEANQIISPQLQSMA 545
YPNSSE +G + F TP N++QA++L+SVL+EA Q S L +A
Sbjct: 568 YPNSSENYVHRIGRTGRCQQLGTAYTFFTPDNAKQARELISVLEEAGQTPSQALLDLA 625
>AY069097-1|AAL39242.1| 813|Drosophila melanogaster GH11602p
protein.
Length = 813
Score = 29.1 bits (62), Expect = 7.0
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +1
Query: 403 RQIVCNHCPPFGYSCQNCFRV*KSRHHLVHLRRICSCS 516
R + ++CP F C+N R H+ HL I S S
Sbjct: 118 RDVESSYCPEFNEECRNTSCRHSLRSHIAHLDNISSSS 155
>AF029776-1|AAC39102.1| 813|Drosophila melanogaster GCN5 protein.
Length = 813
Score = 29.1 bits (62), Expect = 7.0
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +1
Query: 403 RQIVCNHCPPFGYSCQNCFRV*KSRHHLVHLRRICSCS 516
R + ++CP F C+N R H+ HL I S S
Sbjct: 118 RDVESSYCPEFNEECRNTSCRHSLRSHIAHLDNISSSS 155
>AE014296-2156|AAF49904.1| 813|Drosophila melanogaster CG4107-PA
protein.
Length = 813
Score = 29.1 bits (62), Expect = 7.0
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +1
Query: 403 RQIVCNHCPPFGYSCQNCFRV*KSRHHLVHLRRICSCS 516
R + ++CP F C+N R H+ HL I S S
Sbjct: 118 RDVESSYCPEFNEECRNTSCRHSLRSHIAHLDNISSSS 155
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,125,298
Number of Sequences: 53049
Number of extensions: 525059
Number of successful extensions: 1050
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1028
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3520086471
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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