Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_B18
(876 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK096721-1|BAC04850.1| 180|Homo sapiens protein ( Homo sapiens ... 36 0.15
BC113562-1|AAI13563.1| 416|Homo sapiens hepatocyte cell adhesio... 36 0.25
BC104831-1|AAI04832.1| 416|Homo sapiens hepatocyte cell adhesio... 36 0.25
AY047587-1|AAQ93018.1| 416|Homo sapiens hypothetical protein pr... 36 0.25
AL834419-1|CAD39081.1| 165|Homo sapiens hypothetical protein pr... 36 0.25
AK098396-1|BAC05297.1| 416|Homo sapiens protein ( Homo sapiens ... 36 0.25
AC006011-2|AAX82033.1| 1336|Homo sapiens unknown protein. 33 1.0
AB044749-1|BAB32435.1| 1336|Homo sapiens WDC146 protein. 33 1.0
BC013284-1|AAH13284.1| 276|Homo sapiens LOC642031 protein protein. 33 1.4
M64592-1|AAA59572.1| 554|Homo sapiens macrophage colony-stimula... 26 1.9
M37435-1|AAA52117.1| 554|Homo sapiens CSF1 protein. 26 1.9
M27087-1|AAA59573.1| 553|Homo sapiens macrophage colony-stimula... 26 1.9
BC021117-1|AAH21117.1| 554|Homo sapiens colony stimulating fact... 26 1.9
AL450468-2|CAH71146.1| 554|Homo sapiens colony stimulating fact... 26 1.9
X05825-1|CAA29265.1| 536|Homo sapiens CSF-4 protein. 26 1.9
AB208952-1|BAD92189.1| 515|Homo sapiens colony stimulating fact... 26 1.9
U22386-1|AAA64849.1| 438|Homo sapiens macrophage-colony stimula... 26 1.9
AL450468-1|CAH71147.1| 438|Homo sapiens colony stimulating fact... 26 1.9
AL162741-4|CAI23246.1| 255|Homo sapiens tumor necrosis factor r... 32 2.4
AF241229-1|AAF63506.1| 255|Homo sapiens GITR-D protein. 32 2.4
AF129756-17|AAD18086.1| 2157|Homo sapiens BAT2 protein. 32 3.1
DQ058615-1|AAY99762.1| 1121|Homo sapiens CD163 protein. 31 7.2
BC051281-1|AAH51281.1| 1156|Homo sapiens CD163 molecule protein. 31 7.2
BC030225-1|AAH30225.1| 134|Homo sapiens SNX22 protein protein. 31 7.2
BC028012-1|AAH28012.1| 670|Homo sapiens PML-RARA regulated adap... 31 7.2
AJ272324-1|CAC17767.1| 718|Homo sapiens adaptor molecule-1 prot... 31 7.2
M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartila... 27 8.1
X17406-1|CAA35463.1| 600|Homo sapiens cartilage specific proteo... 27 9.0
BC110827-1|AAI10828.1| 132|Homo sapiens DENND3 protein protein. 30 9.6
BC068551-1|AAH68551.1| 582|Homo sapiens LYN protein protein. 30 9.6
BC059394-1|AAH59394.1| 582|Homo sapiens LYN protein protein. 30 9.6
AK095213-1|BAC04500.1| 126|Homo sapiens protein ( Homo sapiens ... 30 9.6
AF026547-1|AAC80576.1| 1321|Homo sapiens neurocan protein. 30 9.6
AC003110-2|AAB86655.1| 990|Homo sapiens PGCN_HUMAN protein. 30 9.6
AB210004-1|BAE06086.1| 1335|Homo sapiens CSPG3 variant protein p... 30 9.6
>AK096721-1|BAC04850.1| 180|Homo sapiens protein ( Homo sapiens
cDNA FLJ39402 fis, clone PLACE6011975. ).
Length = 180
Score = 36.3 bits (80), Expect = 0.15
Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +2
Query: 188 RGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPSRRIEGSETSAVSV-RQPVGPPRRCRWC 364
RG+ + GG P L G HP +P EP R E + + SV P GP R R C
Sbjct: 83 RGRRQGQGGGAPALLLPRPGCRHPHPPRP-EPRLRAEPGKVTGASVPAPPSGPLPRLRPC 141
Query: 365 PG 370
G
Sbjct: 142 CG 143
>BC113562-1|AAI13563.1| 416|Homo sapiens hepatocyte cell adhesion
molecule protein.
Length = 416
Score = 35.5 bits (78), Expect = 0.25
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -3
Query: 406 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDGRRF 305
P GP GYS +PA P GR GLP R RR+
Sbjct: 329 PRSATEPGPPGYSVSPAVP-GRSPGLPIRSARRY 361
>BC104831-1|AAI04832.1| 416|Homo sapiens hepatocyte cell adhesion
molecule protein.
Length = 416
Score = 35.5 bits (78), Expect = 0.25
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -3
Query: 406 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDGRRF 305
P GP GYS +PA P GR GLP R RR+
Sbjct: 329 PRSATEPGPPGYSVSPAVP-GRSPGLPIRSARRY 361
>AY047587-1|AAQ93018.1| 416|Homo sapiens hypothetical protein
protein.
Length = 416
Score = 35.5 bits (78), Expect = 0.25
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -3
Query: 406 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDGRRF 305
P GP GYS +PA P GR GLP R RR+
Sbjct: 329 PRSATEPGPPGYSVSPAVP-GRSPGLPIRSARRY 361
>AL834419-1|CAD39081.1| 165|Homo sapiens hypothetical protein
protein.
Length = 165
Score = 35.5 bits (78), Expect = 0.25
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -3
Query: 406 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDGRRF 305
P GP GYS +PA P GR GLP R RR+
Sbjct: 78 PRSATEPGPPGYSVSPAVP-GRSPGLPIRSARRY 110
>AK098396-1|BAC05297.1| 416|Homo sapiens protein ( Homo sapiens
cDNA FLJ25530 fis, clone CBR07652. ).
Length = 416
Score = 35.5 bits (78), Expect = 0.25
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -3
Query: 406 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDGRRF 305
P GP GYS +PA P GR GLP R RR+
Sbjct: 329 PRSATEPGPPGYSVSPAVP-GRSPGLPIRSARRY 361
>AC006011-2|AAX82033.1| 1336|Homo sapiens unknown protein.
Length = 1336
Score = 33.5 bits (73), Expect = 1.0
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = -3
Query: 406 PTRQAGSGPAGYSGTPAAPSGRPDGLP 326
P Q G GP G+ G P P G P GLP
Sbjct: 641 PLHQGGGGPQGFMG-PQGPQGPPQGLP 666
>AB044749-1|BAB32435.1| 1336|Homo sapiens WDC146 protein.
Length = 1336
Score = 33.5 bits (73), Expect = 1.0
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = -3
Query: 406 PTRQAGSGPAGYSGTPAAPSGRPDGLP 326
P Q G GP G+ G P P G P GLP
Sbjct: 641 PLHQGGGGPQGFMG-PQGPQGPPQGLP 666
>BC013284-1|AAH13284.1| 276|Homo sapiens LOC642031 protein protein.
Length = 276
Score = 33.1 bits (72), Expect = 1.4
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Frame = +2
Query: 200 PDEVGGLPRSTLQPDGAAHPKDA-----QPTEPSRRIEGSETSAVSVRQPVGPPRRCRWC 364
P++ G L S L P K QP P R + G E +R +GP + C+
Sbjct: 138 PEQPGPLTPSLLGPGRPRQQKQPLMGPEQPCPPKRPLMGPEQPCQPLRPLMGPNKPCKPQ 197
Query: 365 PGIPRWTRTSLPGRDAIHRRPV 430
P +P R SL G+ RP+
Sbjct: 198 PLLPIPDRPSLLGQPGPPCRPL 219
>M64592-1|AAA59572.1| 554|Homo sapiens macrophage
colony-stimulating factor protein.
Length = 554
Score = 25.8 bits (54), Expect(2) = 1.9
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Frame = +1
Query: 250 GSPQGRPADGAFEANRRL*NVGRLGT-----AARRAAQTVPLVSRNTPLDQNQPAGSGRD 414
GSPQ RP+ GAF +GT A A +P V + T L ++P G
Sbjct: 276 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 334
Query: 415 T 417
T
Sbjct: 335 T 335
Score = 25.4 bits (53), Expect(2) = 1.9
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 487 TPSGRPLTFTGGSSPLTGAEVGQKP 561
T RP F SSPL + GQ+P
Sbjct: 335 TEPARPSNFLSASSPLPASAKGQQP 359
>M37435-1|AAA52117.1| 554|Homo sapiens CSF1 protein.
Length = 554
Score = 25.8 bits (54), Expect(2) = 1.9
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Frame = +1
Query: 250 GSPQGRPADGAFEANRRL*NVGRLGT-----AARRAAQTVPLVSRNTPLDQNQPAGSGRD 414
GSPQ RP+ GAF +GT A A +P V + T L ++P G
Sbjct: 276 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 334
Query: 415 T 417
T
Sbjct: 335 T 335
Score = 25.4 bits (53), Expect(2) = 1.9
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 487 TPSGRPLTFTGGSSPLTGAEVGQKP 561
T RP F SSPL + GQ+P
Sbjct: 335 TEPARPSNFLSASSPLPASAKGQQP 359
>M27087-1|AAA59573.1| 553|Homo sapiens macrophage
colony-stimulating factor protein.
Length = 553
Score = 25.8 bits (54), Expect(2) = 1.9
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Frame = +1
Query: 250 GSPQGRPADGAFEANRRL*NVGRLGT-----AARRAAQTVPLVSRNTPLDQNQPAGSGRD 414
GSPQ RP+ GAF +GT A A +P V + T L ++P G
Sbjct: 276 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 334
Query: 415 T 417
T
Sbjct: 335 T 335
Score = 25.4 bits (53), Expect(2) = 1.9
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 487 TPSGRPLTFTGGSSPLTGAEVGQKP 561
T RP F SSPL + GQ+P
Sbjct: 335 TEPARPSNFLSASSPLPASAKGQQP 359
>BC021117-1|AAH21117.1| 554|Homo sapiens colony stimulating factor
1 (macrophage) protein.
Length = 554
Score = 25.8 bits (54), Expect(2) = 1.9
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Frame = +1
Query: 250 GSPQGRPADGAFEANRRL*NVGRLGT-----AARRAAQTVPLVSRNTPLDQNQPAGSGRD 414
GSPQ RP+ GAF +GT A A +P V + T L ++P G
Sbjct: 276 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 334
Query: 415 T 417
T
Sbjct: 335 T 335
Score = 25.4 bits (53), Expect(2) = 1.9
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 487 TPSGRPLTFTGGSSPLTGAEVGQKP 561
T RP F SSPL + GQ+P
Sbjct: 335 TEPARPSNFLSASSPLPASAKGQQP 359
>AL450468-2|CAH71146.1| 554|Homo sapiens colony stimulating factor
1 (macrophage) protein.
Length = 554
Score = 25.8 bits (54), Expect(2) = 1.9
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Frame = +1
Query: 250 GSPQGRPADGAFEANRRL*NVGRLGT-----AARRAAQTVPLVSRNTPLDQNQPAGSGRD 414
GSPQ RP+ GAF +GT A A +P V + T L ++P G
Sbjct: 276 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 334
Query: 415 T 417
T
Sbjct: 335 T 335
Score = 25.4 bits (53), Expect(2) = 1.9
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 487 TPSGRPLTFTGGSSPLTGAEVGQKP 561
T RP F SSPL + GQ+P
Sbjct: 335 TEPARPSNFLSASSPLPASAKGQQP 359
>X05825-1|CAA29265.1| 536|Homo sapiens CSF-4 protein.
Length = 536
Score = 25.8 bits (54), Expect(2) = 1.9
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Frame = +1
Query: 250 GSPQGRPADGAFEANRRL*NVGRLGT-----AARRAAQTVPLVSRNTPLDQNQPAGSGRD 414
GSPQ RP+ GAF +GT A A +P V + T L ++P G
Sbjct: 258 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 316
Query: 415 T 417
T
Sbjct: 317 T 317
Score = 25.4 bits (53), Expect(2) = 1.9
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 487 TPSGRPLTFTGGSSPLTGAEVGQKP 561
T RP F SSPL + GQ+P
Sbjct: 317 TEPARPSNFLSASSPLPASAKGQQP 341
>AB208952-1|BAD92189.1| 515|Homo sapiens colony stimulating factor
1 isoform a precursor variant protein.
Length = 515
Score = 25.8 bits (54), Expect(2) = 1.9
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Frame = +1
Query: 250 GSPQGRPADGAFEANRRL*NVGRLGT-----AARRAAQTVPLVSRNTPLDQNQPAGSGRD 414
GSPQ RP+ GAF +GT A A +P V + T L ++P G
Sbjct: 330 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 388
Query: 415 T 417
T
Sbjct: 389 T 389
Score = 25.4 bits (53), Expect(2) = 1.9
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 487 TPSGRPLTFTGGSSPLTGAEVGQKP 561
T RP F SSPL + GQ+P
Sbjct: 389 TEPARPSNFLSASSPLPASAKGQQP 413
>U22386-1|AAA64849.1| 438|Homo sapiens macrophage-colony
stimulating factor gamma precursor protein.
Length = 438
Score = 25.8 bits (54), Expect(2) = 1.9
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Frame = +1
Query: 250 GSPQGRPADGAFEANRRL*NVGRLGT-----AARRAAQTVPLVSRNTPLDQNQPAGSGRD 414
GSPQ RP+ GAF +GT A A +P V + T L ++P G
Sbjct: 276 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 334
Query: 415 T 417
T
Sbjct: 335 T 335
Score = 25.4 bits (53), Expect(2) = 1.9
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 487 TPSGRPLTFTGGSSPLTGAEVGQKP 561
T RP F SSPL + GQ+P
Sbjct: 335 TEPARPSNFLSASSPLPASAKGQQP 359
>AL450468-1|CAH71147.1| 438|Homo sapiens colony stimulating factor
1 (macrophage) protein.
Length = 438
Score = 25.8 bits (54), Expect(2) = 1.9
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Frame = +1
Query: 250 GSPQGRPADGAFEANRRL*NVGRLGT-----AARRAAQTVPLVSRNTPLDQNQPAGSGRD 414
GSPQ RP+ GAF +GT A A +P V + T L ++P G
Sbjct: 276 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 334
Query: 415 T 417
T
Sbjct: 335 T 335
Score = 25.4 bits (53), Expect(2) = 1.9
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 487 TPSGRPLTFTGGSSPLTGAEVGQKP 561
T RP F SSPL + GQ+P
Sbjct: 335 TEPARPSNFLSASSPLPASAKGQQP 359
>AL162741-4|CAI23246.1| 255|Homo sapiens tumor necrosis factor
receptor superfamily, member 18 protein.
Length = 255
Score = 32.3 bits (70), Expect = 2.4
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +2
Query: 239 PDGAAHPKDAQPTEPSRRIEGSETSAVSVRQPVGPPRRCRWCPGIPR 379
P+ A+ P+ + ++ RR G ET +P GPP PG P+
Sbjct: 145 PEAASSPRKSGASDRQRRRGGWETCGCEPGRPPGPPTAASPSPGAPQ 191
>AF241229-1|AAF63506.1| 255|Homo sapiens GITR-D protein.
Length = 255
Score = 32.3 bits (70), Expect = 2.4
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +2
Query: 239 PDGAAHPKDAQPTEPSRRIEGSETSAVSVRQPVGPPRRCRWCPGIPR 379
P+ A+ P+ + ++ RR G ET +P GPP PG P+
Sbjct: 145 PEAASSPRKSGASDRQRRRGGWETCGCEPGRPPGPPTAASPSPGAPQ 191
>AF129756-17|AAD18086.1| 2157|Homo sapiens BAT2 protein.
Length = 2157
Score = 31.9 bits (69), Expect = 3.1
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +2
Query: 308 TSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRR 424
T V + Q PP RW P W RT LP R+ RR
Sbjct: 2103 TQRVDLYQQASPPDALRWIP--KPWERTGLPPREGPSRR 2139
>DQ058615-1|AAY99762.1| 1121|Homo sapiens CD163 protein.
Length = 1121
Score = 30.7 bits (66), Expect = 7.2
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 82 STICMVL*ADRGTKDFRAHPLNDSPXTLT 168
S + MVL D G+ DFR H +N SP T+T
Sbjct: 2 SKLRMVLLEDSGSADFRRHFVNLSPFTIT 30
>BC051281-1|AAH51281.1| 1156|Homo sapiens CD163 molecule protein.
Length = 1156
Score = 30.7 bits (66), Expect = 7.2
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 82 STICMVL*ADRGTKDFRAHPLNDSPXTLT 168
S + MVL D G+ DFR H +N SP T+T
Sbjct: 2 SKLRMVLLEDSGSADFRRHFVNLSPFTIT 30
>BC030225-1|AAH30225.1| 134|Homo sapiens SNX22 protein protein.
Length = 134
Score = 30.7 bits (66), Expect = 7.2
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +2
Query: 287 RRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSL 397
R +EG + S VRQPV P R R PG PR + +L
Sbjct: 96 RALEGPQGSEGQVRQPVLPGVRERRVPGQPRRRKAAL 132
>BC028012-1|AAH28012.1| 670|Homo sapiens PML-RARA regulated adaptor
molecule 1 protein.
Length = 670
Score = 30.7 bits (66), Expect = 7.2
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +2
Query: 206 EVGGLPRSTLQPDGAAHP-KDAQPTE--PSRRIEGSETSAVSVRQP 334
E+GGLPR++ +P+ + P K QP P R+ E SAV R P
Sbjct: 325 ELGGLPRTSSEPEFNSLPRKLLQPERRGPPRKFSQPEPSAVLKRHP 370
>AJ272324-1|CAC17767.1| 718|Homo sapiens adaptor molecule-1
protein.
Length = 718
Score = 30.7 bits (66), Expect = 7.2
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +2
Query: 206 EVGGLPRSTLQPDGAAHP-KDAQPTE--PSRRIEGSETSAVSVRQP 334
E+GGLPR++ +P+ + P K QP P R+ E SAV R P
Sbjct: 373 ELGGLPRTSSEPEFNSLPRKLLQPERRGPPRKFSQPEPSAVLKRHP 418
>M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartilage
proteoglycan core protein protein.
Length = 2316
Score = 26.6 bits (56), Expect(2) = 8.1
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -3
Query: 421 TVYRVPTRQ-AGSGPAGYSGTPAAPSGRPD 335
+V + PT Q AG GP+G A SG PD
Sbjct: 1829 SVTQAPTAQEAGEGPSGILELSGAHSGAPD 1858
Score = 22.2 bits (45), Expect(2) = 8.1
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3
Query: 352 PSGRPDGLPYRDG 314
PSG P G PY G
Sbjct: 1879 PSGEPPGTPYFSG 1891
>X17406-1|CAA35463.1| 600|Homo sapiens cartilage specific
proteoglycan (600 AA) protein.
Length = 600
Score = 26.6 bits (56), Expect(2) = 9.0
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -3
Query: 421 TVYRVPTRQ-AGSGPAGYSGTPAAPSGRPD 335
+V + PT Q AG GP+G A SG PD
Sbjct: 52 SVTQAPTAQEAGEGPSGILELSGAHSGAPD 81
Score = 22.2 bits (45), Expect(2) = 9.0
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3
Query: 352 PSGRPDGLPYRDG 314
PSG P G PY G
Sbjct: 102 PSGEPPGTPYFSG 114
>BC110827-1|AAI10828.1| 132|Homo sapiens DENND3 protein protein.
Length = 132
Score = 30.3 bits (65), Expect = 9.6
Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Frame = +2
Query: 344 PRRCRWCPGIPRWT--RTSLPGR 406
P RC W PG P T RT+ PGR
Sbjct: 106 PSRCAWSPGFPITTPSRTAFPGR 128
>BC068551-1|AAH68551.1| 582|Homo sapiens LYN protein protein.
Length = 582
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +2
Query: 239 PDGAAHPKDAQP--TEPSRRIEGSETSAVSVRQPVGPPRR 352
P A P+ +P + PS R++ S +A P GPPRR
Sbjct: 29 PRQAGRPRHPRPRASSPSPRVQRSRPAASPYAGPAGPPRR 68
>BC059394-1|AAH59394.1| 582|Homo sapiens LYN protein protein.
Length = 582
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +2
Query: 239 PDGAAHPKDAQP--TEPSRRIEGSETSAVSVRQPVGPPRR 352
P A P+ +P + PS R++ S +A P GPPRR
Sbjct: 29 PRQAGRPRHPRPRASSPSPRVQRSRPAASPYAGPAGPPRR 68
>AK095213-1|BAC04500.1| 126|Homo sapiens protein ( Homo sapiens
cDNA FLJ37894 fis, clone BRTHA2004639. ).
Length = 126
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -2
Query: 608 IPLRTYPSP-PSRGPQKGFCPTSAPVRGELPPVKVKGRP 495
+PL ++P P P Q GF P AP + LPP P
Sbjct: 15 VPLTSFPVPYPDFRTQPGFMPVLAPEKRVLPPPLAVSHP 53
>AF026547-1|AAC80576.1| 1321|Homo sapiens neurocan protein.
Length = 1321
Score = 30.3 bits (65), Expect = 9.6
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -3
Query: 466 QHSSALPWSK*SDRSTVYRVPTRQAGSGPAGYSGTPAAPSG 344
+HSS+ PW + V VPT A + P G G P + SG
Sbjct: 720 EHSSSSPWPSVNRNVAVGFVPTETA-TEPTGLRGIPGSESG 759
>AC003110-2|AAB86655.1| 990|Homo sapiens PGCN_HUMAN protein.
Length = 990
Score = 30.3 bits (65), Expect = 9.6
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -3
Query: 466 QHSSALPWSK*SDRSTVYRVPTRQAGSGPAGYSGTPAAPSG 344
+HSS+ PW + V VPT A + P G G P + SG
Sbjct: 720 EHSSSSPWPSVNRNVAVGFVPTETA-TEPTGLRGIPGSESG 759
>AB210004-1|BAE06086.1| 1335|Homo sapiens CSPG3 variant protein
protein.
Length = 1335
Score = 30.3 bits (65), Expect = 9.6
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -3
Query: 466 QHSSALPWSK*SDRSTVYRVPTRQAGSGPAGYSGTPAAPSG 344
+HSS+ PW + V VPT A + P G G P + SG
Sbjct: 734 EHSSSSPWPSVNRNVAVGFVPTETA-TEPTGLRGIPGSESG 773
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,486,767
Number of Sequences: 237096
Number of extensions: 2754837
Number of successful extensions: 10749
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 8489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10686
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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