Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_B17
         (846 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4348|AAF56872.2|  284|Drosophila melanogaster CG14509-P...    30   4.6  
AY070624-1|AAL48095.1|  560|Drosophila melanogaster RE72861p pro...    29   8.0  
AF017777-10|AAC28406.1|  560|Drosophila melanogaster helicase pr...    29   8.0  
AE014298-3138|AAF50818.2|  560|Drosophila melanogaster CG1666-PA...    29   8.0  

>AE014297-4348|AAF56872.2|  284|Drosophila melanogaster CG14509-PA
           protein.
          Length = 284

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = -3

Query: 550 VSEVVRRRGTATAPVGPWGSRDPLRSAASISSSRTNLRFCNWP 422
           +  VV RR +AT+ + PW +  P  SA    S  +  R C  P
Sbjct: 15  IMPVVGRRSSATSAIIPWNAASPAPSAIPRRSPASAPRICPSP 57


>AY070624-1|AAL48095.1|  560|Drosophila melanogaster RE72861p
           protein.
          Length = 560

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 17/59 (28%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
 Frame = -3

Query: 622 HETPVDTLRTVILLVSVTEVSECLVSEVVRRR-GTATAPVGPWGSRDPLRSAASISSSR 449
           H+ P   LR + +   ++++ E +V + ++R  GT+++PVG   ++ P +SAA  +  R
Sbjct: 478 HDKP---LRAIKVQSHLSDMPEYIVPKALKRVVGTSSSPVGASEAKQPRQSAAKAAFER 533


>AF017777-10|AAC28406.1|  560|Drosophila melanogaster helicase
           protein.
          Length = 560

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 17/59 (28%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
 Frame = -3

Query: 622 HETPVDTLRTVILLVSVTEVSECLVSEVVRRR-GTATAPVGPWGSRDPLRSAASISSSR 449
           H+ P   LR + +   ++++ E +V + ++R  GT+++PVG   ++ P +SAA  +  R
Sbjct: 478 HDKP---LRAIKVQSHLSDMPEYIVPKALKRVVGTSSSPVGASEAKQPRQSAAKAAFER 533


>AE014298-3138|AAF50818.2|  560|Drosophila melanogaster CG1666-PA
           protein.
          Length = 560

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 17/59 (28%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
 Frame = -3

Query: 622 HETPVDTLRTVILLVSVTEVSECLVSEVVRRR-GTATAPVGPWGSRDPLRSAASISSSR 449
           H+ P   LR + +   ++++ E +V + ++R  GT+++PVG   ++ P +SAA  +  R
Sbjct: 478 HDKP---LRAIKVQSHLSDMPEYIVPKALKRVVGTSSSPVGASEAKQPRQSAAKAAFER 533


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,381,838
Number of Sequences: 53049
Number of extensions: 557245
Number of successful extensions: 1031
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1031
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4044853644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)