Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_B17
         (846 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39851-14|AAF99871.2|  354|Caenorhabditis elegans Hypothetical p...    29   4.2  
U39851-13|AAL13325.1|  456|Caenorhabditis elegans Hypothetical p...    29   4.2  
Z83220-2|CAB05701.2|  905|Caenorhabditis elegans Hypothetical pr...    29   5.5  
U80444-1|AAB37787.2|  383|Caenorhabditis elegans Hypothetical pr...    29   5.5  
Z78542-10|CAB01751.2|  428|Caenorhabditis elegans Hypothetical p...    28   9.6  
AL031620-6|CAA20929.2|  428|Caenorhabditis elegans Hypothetical ...    28   9.6  

>U39851-14|AAF99871.2|  354|Caenorhabditis elegans Hypothetical
           protein C23G10.1a protein.
          Length = 354

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -3

Query: 664 VGGRVVCRRSAISEHETPVDTLRTVILLVSVTEVSECLVSEVV 536
           VGGR++C    +S+H   +D LR   L        ECL ++++
Sbjct: 200 VGGRILCMHGGLSQHIKSLDDLRN--LRRPFHSEDECLENDIM 240


>U39851-13|AAL13325.1|  456|Caenorhabditis elegans Hypothetical
           protein C23G10.1b protein.
          Length = 456

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -3

Query: 664 VGGRVVCRRSAISEHETPVDTLRTVILLVSVTEVSECLVSEVV 536
           VGGR++C    +S+H   +D LR   L        ECL ++++
Sbjct: 302 VGGRILCMHGGLSQHIKSLDDLRN--LRRPFHSEDECLENDIM 342


>Z83220-2|CAB05701.2|  905|Caenorhabditis elegans Hypothetical
           protein C34B7.2 protein.
          Length = 905

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = -1

Query: 339 RNVTVKGWKTGANR*LIEKKKNRFSIIGIDRTISGFY 229
           R+ + KG K+G    LIE+  N F I+G  R + G+Y
Sbjct: 72  RSSSKKGTKSG----LIERATNAFGILGCVRFVEGYY 104


>U80444-1|AAB37787.2|  383|Caenorhabditis elegans Hypothetical
           protein F26B1.5 protein.
          Length = 383

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 13/40 (32%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
 Frame = -3

Query: 664 VGGRVVCRRSAISEHETPVDTLRTVIL-LVSVTEVSECLV 548
           VGGR++C    ISE    +D++ +++  L  VT++++ L+
Sbjct: 196 VGGRILCMHGGISEKLESLDSIDSIVRPLPEVTDLAQDLL 235


>Z78542-10|CAB01751.2|  428|Caenorhabditis elegans Hypothetical
           protein C18B12.6 protein.
          Length = 428

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -2

Query: 188 CLFCTEIYVYDFEKK 144
           CLFCTE Y + F KK
Sbjct: 52  CLFCTETYTFLFHKK 66


>AL031620-6|CAA20929.2|  428|Caenorhabditis elegans Hypothetical
           protein C18B12.6 protein.
          Length = 428

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -2

Query: 188 CLFCTEIYVYDFEKK 144
           CLFCTE Y + F KK
Sbjct: 52  CLFCTETYTFLFHKK 66


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,739,056
Number of Sequences: 27780
Number of extensions: 314129
Number of successful extensions: 685
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 685
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)