Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_B15
(809 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 118 1e-27
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 118 1e-27
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 90 4e-19
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 77 3e-15
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 37 0.004
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 29 0.59
SPCC61.05 |||S. pombe specific multicopy membrane protein family... 29 0.78
SPAC1006.08 |etd1||ethanol-hypersensitive mutant protein |Schizo... 26 7.3
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 9.6
SPBC839.08c |its8||pig-N |Schizosaccharomyces pombe|chr 2|||Manual 25 9.6
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 118 bits (283), Expect = 1e-27
Identities = 55/124 (44%), Positives = 75/124 (60%)
Frame = -1
Query: 548 LLSPVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESF 369
L SP++ V+ V E A+GGIY VLN++RGHVF E Q GTP++ +KAYLPVNESF
Sbjct: 719 LASPIIQEPVFLVEIQVSENAMGGIYSVLNKKRGHVFSEEQRVGTPLYNIKAYLPVNESF 778
Query: 368 GFTADLRSITGGQAFPQCVFDHWQVLPWRPVRTSEQALQRCTGNEKEERIEGRSPRLNSI 189
GFT +LR T GQAFPQ VFDHW + P+ + + Q K + ++ P
Sbjct: 779 GFTGELRQATAGQAFPQLVFDHWSPMSGDPLDPTSKPGQIVCEARKRKGLKENVPDYTEY 838
Query: 188 FGQI 177
+ ++
Sbjct: 839 YDRL 842
Score = 99 bits (238), Expect = 4e-22
Identities = 47/75 (62%), Positives = 53/75 (70%)
Frame = -3
Query: 705 FQWXAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLME 526
F W +KEG M EENLR RFNI DV LH DAIHRGGGQIIPT RR +YA L A P + E
Sbjct: 667 FAWASKEGPMFEENLRSCRFNILDVVLHADAIHRGGGQIIPTARRVVYASTLLASPIIQE 726
Query: 525 PVYLCEIQCP*SSCG 481
PV+L EIQ ++ G
Sbjct: 727 PVFLVEIQVSENAMG 741
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 118 bits (283), Expect = 1e-27
Identities = 55/124 (44%), Positives = 75/124 (60%)
Frame = -1
Query: 548 LLSPVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESF 369
L SP++ V+ V E A+GGIY VLN++RGHVF E Q GTP++ +KAYLPVNESF
Sbjct: 719 LASPIIQEPVFLVEIQVSENAMGGIYSVLNKKRGHVFSEEQRVGTPLYNIKAYLPVNESF 778
Query: 368 GFTADLRSITGGQAFPQCVFDHWQVLPWRPVRTSEQALQRCTGNEKEERIEGRSPRLNSI 189
GFT +LR T GQAFPQ VFDHW + P+ + + Q K + ++ P
Sbjct: 779 GFTGELRQATAGQAFPQLVFDHWSPMSGDPLDPTSKPGQIVCEARKRKGLKENVPDYTEY 838
Query: 188 FGQI 177
+ ++
Sbjct: 839 YDRL 842
Score = 99 bits (238), Expect = 4e-22
Identities = 47/75 (62%), Positives = 53/75 (70%)
Frame = -3
Query: 705 FQWXAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLME 526
F W +KEG M EENLR RFNI DV LH DAIHRGGGQIIPT RR +YA L A P + E
Sbjct: 667 FAWASKEGPMFEENLRSCRFNILDVVLHADAIHRGGGQIIPTARRVVYASTLLASPIIQE 726
Query: 525 PVYLCEIQCP*SSCG 481
PV+L EIQ ++ G
Sbjct: 727 PVFLVEIQVSENAMG 741
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 89.8 bits (213), Expect = 4e-19
Identities = 38/70 (54%), Positives = 48/70 (68%)
Frame = -3
Query: 705 FQWXAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLME 526
FQW +EG + +E +R V F + DV L + I+RGGGQIIPT RR Y+ LTA PRLME
Sbjct: 783 FQWGTREGPLCDETIRNVNFRLMDVVLAPEQIYRGGGQIIPTARRVCYSSFLTASPRLME 842
Query: 525 PVYLCEIQCP 496
PVY+ E+ P
Sbjct: 843 PVYMVEVHAP 852
Score = 82.2 bits (194), Expect = 8e-17
Identities = 41/92 (44%), Positives = 56/92 (60%)
Frame = -1
Query: 542 SPVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGF 363
SP L V+ P ++ IY +L RRRGHV ++ G+P+++V+A +PV +S GF
Sbjct: 837 SPRLMEPVYMVEVHAPADSLPIIYDLLTRRRGHVLQDIPRPGSPLYLVRALIPVIDSCGF 896
Query: 362 TADLRSITGGQAFPQCVFDHWQVLPWRPVRTS 267
DLR T GQA Q VFDHWQV+P P+ S
Sbjct: 897 ETDLRVHTQGQAMCQMVFDHWQVVPGDPLDKS 928
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 1000
Score = 77.0 bits (181), Expect = 3e-15
Identities = 36/80 (45%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Frame = -1
Query: 485 VGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSITGGQAFPQCVFD 306
+G +YGV+++RRG V +E GTP FIVKA +PV ESFGF ++ T G A+PQ +F
Sbjct: 878 LGRVYGVVSKRRGRVIDEEMKEGTPFFIVKALIPVVESFGFAVEILKRTSGAAYPQLIFH 937
Query: 305 HWQVLPWRP--VRTSEQALQ 252
+++L P V T+E+ L+
Sbjct: 938 GFEMLDENPFWVPTTEEELE 957
Score = 25.8 bits (54), Expect = 7.3
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -3
Query: 597 GQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQ 502
GQ+I + + L PRLM +Y C++Q
Sbjct: 841 GQVISVVKESIRHGFLGWSPRLMLAMYSCDVQ 872
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 36.7 bits (81), Expect = 0.004
Identities = 17/71 (23%), Positives = 39/71 (54%)
Frame = -1
Query: 542 SPVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGF 363
+P++ + V + P GG+ G L++R+ + + F ++A +P+N F +
Sbjct: 671 NPMVLEPIMNVSITAPVEHQGGVIGNLDKRKATIVDSD--TDEDEFTLQAEVPLNSMFSY 728
Query: 362 TADLRSITGGQ 330
++D+R++T G+
Sbjct: 729 SSDIRALTKGK 739
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1016
Score = 29.5 bits (63), Expect = 0.59
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = +1
Query: 238 FPVQRCRACSEVRTGLQGRTCQWSNTHCGKACPPVMERKSAVKPNDS 378
+ + RC C E G C + C K C P + K K +DS
Sbjct: 414 YQIMRCALCGEFLKNAAGMQCIDCHYTCHKKCYPKVVTKCISKSSDS 460
>SPCC61.05 |||S. pombe specific multicopy membrane protein family
1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 469
Score = 29.1 bits (62), Expect = 0.78
Identities = 19/73 (26%), Positives = 32/73 (43%)
Frame = -1
Query: 548 LLSPVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESF 369
+L ++W++Y FV + +P AV +Y R FE +I A + V+
Sbjct: 338 ILLKLIWNIYTFVYYGLPFFAVYRLYKQAGESRKLGFEAKYSLLRTCYIALAAVTVSNCL 397
Query: 368 GFTADLRSITGGQ 330
F +R + G Q
Sbjct: 398 -FLGVVRPLLGSQ 409
>SPAC1006.08 |etd1||ethanol-hypersensitive mutant protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 391
Score = 25.8 bits (54), Expect = 7.3
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 580 CWNDLATTSMDGISMECYIIDVESNTTQI 666
CW++L+TTS + + II + TT I
Sbjct: 211 CWDELSTTSPESSKVSEPIIQDNTQTTHI 239
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.4 bits (53), Expect = 9.6
Identities = 22/81 (27%), Positives = 37/81 (45%)
Frame = +1
Query: 481 PTATSGTLNFTKIYRLHKTGLSS*QTCVQASSSCWNDLATTSMDGISMECYIIDVESNTT 660
PT+TS T++ + T SS T +SSS + +T S +S ++++
Sbjct: 283 PTSTSSTISSSSSSSSSPTSTSS--TISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSS 340
Query: 661 QILFSHNSFLSGPLESATTES 723
+ S +S S S+TT S
Sbjct: 341 STISSSSSSPSSSSFSSTTSS 361
>SPBC839.08c |its8||pig-N |Schizosaccharomyces pombe|chr 2|||Manual
Length = 935
Score = 25.4 bits (53), Expect = 9.6
Identities = 9/36 (25%), Positives = 19/36 (52%)
Frame = -1
Query: 548 LLSPVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHV 441
+ +PV + VP +A+ +G++N+R G +
Sbjct: 828 VFNPVTQGALLMYTILVPFIALSAAFGIMNKRLGGI 863
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,321,314
Number of Sequences: 5004
Number of extensions: 70865
Number of successful extensions: 169
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 167
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 394431430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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