Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_B15
(809 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 155 5e-38
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 155 5e-38
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 86 2e-17
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 86 2e-17
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 57 2e-08
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 45 7e-05
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 33 0.32
AF068713-7|AAC17798.2| 359|Caenorhabditis elegans Hypothetical ... 30 2.3
U70844-3|AAB09093.2| 209|Caenorhabditis elegans Hypothetical pr... 29 5.2
AL032631-7|CAB63337.2| 855|Caenorhabditis elegans Hypothetical ... 28 9.1
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical protein
F25H5.4 protein.
Length = 852
Score = 155 bits (375), Expect = 5e-38
Identities = 74/116 (63%), Positives = 83/116 (71%)
Frame = -1
Query: 539 PVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFT 360
P L V+ PE AVGGIYGVLNRRRGHVFEESQV GTPMF+VKAYLPVNESFGFT
Sbjct: 732 PRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEESQVTGTPMFVVKAYLPVNESFGFT 791
Query: 359 ADLRSITGGQAFPQCVFDHWQVLPWRPVRTSEQALQRCTGNEKEERIEGRSPRLNS 192
ADLRS TGGQAFPQCVFDHWQVLP P+ + Q K + ++ P L++
Sbjct: 792 ADLRSNTGGQAFPQCVFDHWQVLPGDPLEAGTKPNQIVLDTRKRKGLKEGVPALDN 847
Score = 125 bits (302), Expect = 3e-29
Identities = 53/75 (70%), Positives = 65/75 (86%)
Frame = -3
Query: 705 FQWXAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLME 526
FQW +EGV+++EN+RGVRFN++DVTLH DAIHRGGGQIIPT RR YA +LTA+PRL+E
Sbjct: 677 FQWATREGVLSDENMRGVRFNVHDVTLHADAIHRGGGQIIPTARRVFYASVLTAEPRLLE 736
Query: 525 PVYLCEIQCP*SSCG 481
PVYL EIQCP ++ G
Sbjct: 737 PVYLVEIQCPEAAVG 751
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/31 (54%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = -2
Query: 808 ARKIGAX-PRGTGPNIL-GMLQRVQYLNEXR 722
ARKI P GTGPN+L + + VQYLNE +
Sbjct: 640 ARKIWCFGPDGTGPNLLMDVTKGVQYLNEIK 670
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 155 bits (375), Expect = 5e-38
Identities = 74/116 (63%), Positives = 83/116 (71%)
Frame = -1
Query: 539 PVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFT 360
P L V+ PE AVGGIYGVLNRRRGHVFEESQV GTPMF+VKAYLPVNESFGFT
Sbjct: 732 PRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEESQVTGTPMFVVKAYLPVNESFGFT 791
Query: 359 ADLRSITGGQAFPQCVFDHWQVLPWRPVRTSEQALQRCTGNEKEERIEGRSPRLNS 192
ADLRS TGGQAFPQCVFDHWQVLP P+ + Q K + ++ P L++
Sbjct: 792 ADLRSNTGGQAFPQCVFDHWQVLPGDPLEAGTKPNQIVLDTRKRKGLKEGVPALDN 847
Score = 125 bits (302), Expect = 3e-29
Identities = 53/75 (70%), Positives = 65/75 (86%)
Frame = -3
Query: 705 FQWXAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLME 526
FQW +EGV+++EN+RGVRFN++DVTLH DAIHRGGGQIIPT RR YA +LTA+PRL+E
Sbjct: 677 FQWATREGVLSDENMRGVRFNVHDVTLHADAIHRGGGQIIPTARRVFYASVLTAEPRLLE 736
Query: 525 PVYLCEIQCP*SSCG 481
PVYL EIQCP ++ G
Sbjct: 737 PVYLVEIQCPEAAVG 751
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/31 (54%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = -2
Query: 808 ARKIGAX-PRGTGPNIL-GMLQRVQYLNEXR 722
ARKI P GTGPN+L + + VQYLNE +
Sbjct: 640 ARKIWCFGPDGTGPNLLMDVTKGVQYLNEIK 670
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 86.2 bits (204), Expect = 2e-17
Identities = 40/94 (42%), Positives = 56/94 (59%)
Frame = -1
Query: 548 LLSPVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESF 369
+ +P L Y V+ P V +Y VL +RRGHV ++ + G+PM+ + AY+PV +SF
Sbjct: 826 MATPRLMEPYYTVEVVAPADCVAAVYTVLAKRRGHVTTDAPMPGSPMYTISAYIPVMDSF 885
Query: 368 GFTADLRSITGGQAFPQCVFDHWQVLPWRPVRTS 267
GF DLR T GQAF F HWQ++P P+ S
Sbjct: 886 GFETDLRIHTQGQAFCMSAFHHWQLVPGDPLDKS 919
Score = 85.8 bits (203), Expect = 3e-17
Identities = 35/70 (50%), Positives = 47/70 (67%)
Frame = -3
Query: 705 FQWXAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLME 526
FQW +EG + EE +R V+F + D + T+ ++RGGGQ+IPT RRC Y+ L A PRLME
Sbjct: 774 FQWATREGPLCEEPIRQVKFKLLDAAIATEPLYRGGGQMIPTARRCAYSAFLMATPRLME 833
Query: 525 PVYLCEIQCP 496
P Y E+ P
Sbjct: 834 PYYTVEVVAP 843
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 86.2 bits (204), Expect = 2e-17
Identities = 40/94 (42%), Positives = 56/94 (59%)
Frame = -1
Query: 548 LLSPVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESF 369
+ +P L Y V+ P V +Y VL +RRGHV ++ + G+PM+ + AY+PV +SF
Sbjct: 701 MATPRLMEPYYTVEVVAPADCVAAVYTVLAKRRGHVTTDAPMPGSPMYTISAYIPVMDSF 760
Query: 368 GFTADLRSITGGQAFPQCVFDHWQVLPWRPVRTS 267
GF DLR T GQAF F HWQ++P P+ S
Sbjct: 761 GFETDLRIHTQGQAFCMSAFHHWQLVPGDPLDKS 794
Score = 85.8 bits (203), Expect = 3e-17
Identities = 35/70 (50%), Positives = 47/70 (67%)
Frame = -3
Query: 705 FQWXAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLME 526
FQW +EG + EE +R V+F + D + T+ ++RGGGQ+IPT RRC Y+ L A PRLME
Sbjct: 649 FQWATREGPLCEEPIRQVKFKLLDAAIATEPLYRGGGQMIPTARRCAYSAFLMATPRLME 708
Query: 525 PVYLCEIQCP 496
P Y E+ P
Sbjct: 709 PYYTVEVVAP 718
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/73 (39%), Positives = 39/73 (53%)
Frame = -1
Query: 488 AVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSITGGQAFPQCVF 309
A+G ++ VL++R+ V E T +F V + +PV ESF F LR T G A Q F
Sbjct: 769 ALGKVHAVLSQRKSKVLSEDINEATNLFEVVSLMPVVESFSFCDQLRKFTSGMASAQLQF 828
Query: 308 DHWQVLPWRPVRT 270
HWQV+ P T
Sbjct: 829 SHWQVIDEDPYWT 841
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 44.8 bits (101), Expect = 7e-05
Identities = 24/58 (41%), Positives = 28/58 (48%)
Frame = -1
Query: 443 VFEESQVAGTPMFIVKAYLPVNESFGFTADLRSITGGQAFPQCVFDHWQVLPWRPVRT 270
V E T +F V + +PV ESF F LR T G A Q F HWQV+ P T
Sbjct: 595 VLSEDINEATNLFEVVSLMPVVESFSFCDQLRKFTSGMASAQLQFSHWQVIDEDPYWT 652
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 32.7 bits (71), Expect = 0.32
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = -1
Query: 512 VKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSITGG 333
V+ +VP G + L +R + G I +A P+++ FG+T++LRS+T G
Sbjct: 649 VEATVPTEFQGNVVTSLTQRNALITTTDSTEGYATVICEA--PLSDMFGYTSELRSLTEG 706
Query: 332 Q 330
+
Sbjct: 707 K 707
>AF068713-7|AAC17798.2| 359|Caenorhabditis elegans Hypothetical
protein T24A6.11 protein.
Length = 359
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 54 LLSHLRVCFNMMRNMCC*K*TCVKRFPYRYVFLICFNYVV 173
+L+ LR+C+ C + TC K FP ++V L+ ++VV
Sbjct: 290 ILTPLRICYTSCLFQHC-QITCQKNFPTKFVDLLSLSHVV 328
>U70844-3|AAB09093.2| 209|Caenorhabditis elegans Hypothetical
protein ZK154.1 protein.
Length = 209
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -3
Query: 519 YLCEIQCP*SSCGWYLRCTEQTSWSRFRRVPGGRYTYV 406
Y C +QC W +C E TS+S FR GR T+V
Sbjct: 42 YTCAVQCE-----WRKQCNEHTSFSTFR----GRRTFV 70
>AL032631-7|CAB63337.2| 855|Caenorhabditis elegans Hypothetical
protein Y106G6H.5 protein.
Length = 855
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 178 ICPNIELSLGDLPSI-LSSFSFPVQRCRACSEVRTGLQGRTCQWSNTHCGK 327
I P+ +GD+ + +SS FP RC+ E+ G+ S THCG+
Sbjct: 615 IGPSSRYLMGDITGLSMSSNDFPTFRCQ---EINIGMATGIRAISVTHCGE 662
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,698,025
Number of Sequences: 27780
Number of extensions: 412978
Number of successful extensions: 1089
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1087
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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