Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_B11
         (838 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC050397-1|AAH50397.1|  489|Homo sapiens MARCH9 protein protein.       32   3.0  
U73825-1|AAB95090.1|  465|Homo sapiens Smad5 protein.                  31   5.2  
U59913-1|AAC50791.1|  465|Homo sapiens Smad5 protein.                  31   5.2  
CR457424-1|CAG33705.1|  465|Homo sapiens MADH5 protein.                31   5.2  
BC009682-1|AAH09682.1|  465|Homo sapiens SMAD family member 5 pr...    31   5.2  
AF010607-1|AAB92396.1|  465|Homo sapiens SMAD5 protein.                31   5.2  
AF010601-1|AAB66353.1|  465|Homo sapiens SMAD5 protein.                31   5.2  
AF009744-1|AAB82655.1|  462|Homo sapiens Mad homolog protein.          31   5.2  
AF009678-1|AAB72180.1|  465|Homo sapiens Smad5 protein.                31   5.2  
AK126090-1|BAC86433.1|  180|Homo sapiens protein ( Homo sapiens ...    30   9.0  

>BC050397-1|AAH50397.1|  489|Homo sapiens MARCH9 protein protein.
          Length = 489

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = +1

Query: 469 RPIVEGPGSPTDRPARWPYPAVAPPP 546
           RP   G  SP  RP  WP+P   PPP
Sbjct: 53  RPAGCGTLSPPPRPLPWPWPPTPPPP 78


>U73825-1|AAB95090.1|  465|Homo sapiens Smad5 protein.
          Length = 465

 Score = 31.1 bits (67), Expect = 5.2
 Identities = 14/27 (51%), Positives = 14/27 (51%)
 Frame = +1

Query: 472 PIVEGPGSPTDRPARWPYPAVAPPPTQ 552
           P   GPGSP   PA  P PA  PP  Q
Sbjct: 206 PASSGPGSPFQLPADTPPPAYMPPDDQ 232


>U59913-1|AAC50791.1|  465|Homo sapiens Smad5 protein.
          Length = 465

 Score = 31.1 bits (67), Expect = 5.2
 Identities = 14/27 (51%), Positives = 14/27 (51%)
 Frame = +1

Query: 472 PIVEGPGSPTDRPARWPYPAVAPPPTQ 552
           P   GPGSP   PA  P PA  PP  Q
Sbjct: 206 PASSGPGSPFQLPADTPPPAYMPPDDQ 232


>CR457424-1|CAG33705.1|  465|Homo sapiens MADH5 protein.
          Length = 465

 Score = 31.1 bits (67), Expect = 5.2
 Identities = 14/27 (51%), Positives = 14/27 (51%)
 Frame = +1

Query: 472 PIVEGPGSPTDRPARWPYPAVAPPPTQ 552
           P   GPGSP   PA  P PA  PP  Q
Sbjct: 206 PASSGPGSPFQLPADTPPPAYMPPDDQ 232


>BC009682-1|AAH09682.1|  465|Homo sapiens SMAD family member 5
           protein.
          Length = 465

 Score = 31.1 bits (67), Expect = 5.2
 Identities = 14/27 (51%), Positives = 14/27 (51%)
 Frame = +1

Query: 472 PIVEGPGSPTDRPARWPYPAVAPPPTQ 552
           P   GPGSP   PA  P PA  PP  Q
Sbjct: 206 PASSGPGSPFQLPADTPPPAYMPPDDQ 232


>AF010607-1|AAB92396.1|  465|Homo sapiens SMAD5 protein.
          Length = 465

 Score = 31.1 bits (67), Expect = 5.2
 Identities = 14/27 (51%), Positives = 14/27 (51%)
 Frame = +1

Query: 472 PIVEGPGSPTDRPARWPYPAVAPPPTQ 552
           P   GPGSP   PA  P PA  PP  Q
Sbjct: 206 PASSGPGSPFQLPADTPPPAYMPPDDQ 232


>AF010601-1|AAB66353.1|  465|Homo sapiens SMAD5 protein.
          Length = 465

 Score = 31.1 bits (67), Expect = 5.2
 Identities = 14/27 (51%), Positives = 14/27 (51%)
 Frame = +1

Query: 472 PIVEGPGSPTDRPARWPYPAVAPPPTQ 552
           P   GPGSP   PA  P PA  PP  Q
Sbjct: 206 PASSGPGSPFQLPADTPPPAYMPPDDQ 232


>AF009744-1|AAB82655.1|  462|Homo sapiens Mad homolog protein.
          Length = 462

 Score = 31.1 bits (67), Expect = 5.2
 Identities = 14/27 (51%), Positives = 14/27 (51%)
 Frame = +1

Query: 472 PIVEGPGSPTDRPARWPYPAVAPPPTQ 552
           P   GPGSP   PA  P PA  PP  Q
Sbjct: 203 PASSGPGSPFQLPADTPPPAYMPPDDQ 229


>AF009678-1|AAB72180.1|  465|Homo sapiens Smad5 protein.
          Length = 465

 Score = 31.1 bits (67), Expect = 5.2
 Identities = 14/27 (51%), Positives = 14/27 (51%)
 Frame = +1

Query: 472 PIVEGPGSPTDRPARWPYPAVAPPPTQ 552
           P   GPGSP   PA  P PA  PP  Q
Sbjct: 206 PASSGPGSPFQLPADTPPPAYMPPDDQ 232


>AK126090-1|BAC86433.1|  180|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44102 fis, clone TESTI4044035. ).
          Length = 180

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 18/57 (31%), Positives = 24/57 (42%)
 Frame = +1

Query: 487 PGSPTDRPARWPYPAVAPPPTQDTQTLQYRH*QYYCSKCIYRXSCSEMALRRQTTRP 657
           P SP  R   WP+P    P +  TQ L   H +  CS  + R      A +  T +P
Sbjct: 65  PLSPKSRLLLWPFPLSLKPASVWTQLLPSPHSRRGCSALLERPPPLNSAHQTSTIQP 121


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,018,915
Number of Sequences: 237096
Number of extensions: 1982708
Number of successful extensions: 4806
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4789
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10538170902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)