Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_B10
(797 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 169 2e-42
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 167 7e-42
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 167 7e-42
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 167 9e-42
03_01_0034 + 318432-318825,318902-319851 167 9e-42
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 166 2e-41
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 165 4e-41
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 160 1e-39
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 81 1e-15
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 78 7e-15
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 77 1e-14
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 76 3e-14
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 35 0.086
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 169 bits (411), Expect = 2e-42
Identities = 73/96 (76%), Positives = 87/96 (90%)
Frame = -1
Query: 701 RTRTRATFVEWIPXNLKVXVCDIPPRGLKMSATFIGNSTAIQEIFKRISEQFTAMFRRRA 522
+ + + FVEWIP N+K VCDIPPRGLKM+ATF+GNST+IQE+F+R+SEQFTAMFRR+A
Sbjct: 334 QNKNSSYFVEWIPNNVKSSVCDIPPRGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKA 393
Query: 521 FLHWYTGEGMDEMEFTEAASNMADLISEYQQYQEAT 414
FLHWYTGEGMDEMEFTEA SNM DL++EYQQYQ+AT
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDAT 429
Score = 41.5 bits (93), Expect = 8e-04
Identities = 17/25 (68%), Positives = 22/25 (88%)
Frame = -3
Query: 753 FRXRMSMREVDDQILAIQNKNSSYF 679
FR +MS +EVD+Q+L +QNKNSSYF
Sbjct: 317 FRGKMSTKEVDEQMLNVQNKNSSYF 341
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 167 bits (407), Expect = 7e-42
Identities = 73/96 (76%), Positives = 86/96 (89%)
Frame = -1
Query: 701 RTRTRATFVEWIPXNLKVXVCDIPPRGLKMSATFIGNSTAIQEIFKRISEQFTAMFRRRA 522
+ + + FVEWIP N+K VCDIPPRGL M++TFIGNST+IQE+F+R+SEQFTAMFRR+A
Sbjct: 355 QNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKA 414
Query: 521 FLHWYTGEGMDEMEFTEAASNMADLISEYQQYQEAT 414
FLHWYTGEGMDEMEFTEA SNM DL+SEYQQYQ+AT
Sbjct: 415 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 450
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/25 (64%), Positives = 22/25 (88%)
Frame = -3
Query: 753 FRXRMSMREVDDQILAIQNKNSSYF 679
FR +MS +EVD+Q++ +QNKNSSYF
Sbjct: 338 FRGKMSTKEVDEQMINVQNKNSSYF 362
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 167 bits (407), Expect = 7e-42
Identities = 73/96 (76%), Positives = 86/96 (89%)
Frame = -1
Query: 701 RTRTRATFVEWIPXNLKVXVCDIPPRGLKMSATFIGNSTAIQEIFKRISEQFTAMFRRRA 522
+ + + FVEWIP N+K VCDIPPRGL M++TFIGNST+IQE+F+R+SEQFTAMFRR+A
Sbjct: 334 QNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKA 393
Query: 521 FLHWYTGEGMDEMEFTEAASNMADLISEYQQYQEAT 414
FLHWYTGEGMDEMEFTEA SNM DL+SEYQQYQ+AT
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 429
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/25 (64%), Positives = 22/25 (88%)
Frame = -3
Query: 753 FRXRMSMREVDDQILAIQNKNSSYF 679
FR +MS +EVD+Q++ +QNKNSSYF
Sbjct: 317 FRGKMSTKEVDEQMINVQNKNSSYF 341
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 167 bits (406), Expect = 9e-42
Identities = 72/96 (75%), Positives = 86/96 (89%)
Frame = -1
Query: 701 RTRTRATFVEWIPXNLKVXVCDIPPRGLKMSATFIGNSTAIQEIFKRISEQFTAMFRRRA 522
+ + + FVEWIP N+K VCDIPPRGL M++TF+GNST+IQE+F+R+SEQFTAMFRR+A
Sbjct: 514 QNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKA 573
Query: 521 FLHWYTGEGMDEMEFTEAASNMADLISEYQQYQEAT 414
FLHWYTGEGMDEMEFTEA SNM DL+SEYQQYQ+AT
Sbjct: 574 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 609
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/25 (64%), Positives = 22/25 (88%)
Frame = -3
Query: 753 FRXRMSMREVDDQILAIQNKNSSYF 679
FR +MS +EVD+Q++ +QNKNSSYF
Sbjct: 497 FRGKMSTKEVDEQMINVQNKNSSYF 521
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 167 bits (406), Expect = 9e-42
Identities = 73/96 (76%), Positives = 86/96 (89%)
Frame = -1
Query: 701 RTRTRATFVEWIPXNLKVXVCDIPPRGLKMSATFIGNSTAIQEIFKRISEQFTAMFRRRA 522
+ + + FVEWIP N+K VCDIPP GLKM++TFIGNST+IQE+F+R+SEQFTAMFRR+A
Sbjct: 334 QNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKA 393
Query: 521 FLHWYTGEGMDEMEFTEAASNMADLISEYQQYQEAT 414
FLHWYTGEGMDEMEFTEA SNM DL+SEYQQYQ+AT
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 429
Score = 41.5 bits (93), Expect = 8e-04
Identities = 17/25 (68%), Positives = 22/25 (88%)
Frame = -3
Query: 753 FRXRMSMREVDDQILAIQNKNSSYF 679
FR +MS +EVD+Q+L +QNKNSSYF
Sbjct: 317 FRGKMSTKEVDEQMLNVQNKNSSYF 341
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 166 bits (404), Expect = 2e-41
Identities = 72/96 (75%), Positives = 86/96 (89%)
Frame = -1
Query: 701 RTRTRATFVEWIPXNLKVXVCDIPPRGLKMSATFIGNSTAIQEIFKRISEQFTAMFRRRA 522
+ + + FVEWIP N+K VCDIPP GLKM++TFIGNST+IQE+F+R+SEQFTAMFRR+A
Sbjct: 334 QNKNSSYFVEWIPNNVKSSVCDIPPNGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKA 393
Query: 521 FLHWYTGEGMDEMEFTEAASNMADLISEYQQYQEAT 414
FLHWYTGEGMDEMEFTEA SNM DL++EYQQYQ+AT
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDAT 429
Score = 41.5 bits (93), Expect = 8e-04
Identities = 17/25 (68%), Positives = 22/25 (88%)
Frame = -3
Query: 753 FRXRMSMREVDDQILAIQNKNSSYF 679
FR +MS +EVD+Q+L +QNKNSSYF
Sbjct: 317 FRGKMSTKEVDEQMLNVQNKNSSYF 341
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 165 bits (401), Expect = 4e-41
Identities = 72/96 (75%), Positives = 86/96 (89%)
Frame = -1
Query: 701 RTRTRATFVEWIPXNLKVXVCDIPPRGLKMSATFIGNSTAIQEIFKRISEQFTAMFRRRA 522
+ + + FVEWIP N+K VCDIPP GLKM++TFIGNST+IQE+F+R+SEQFTAMFRR+A
Sbjct: 334 QNKNSSYFVEWIPNNVKSSVCDIPPIGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKA 393
Query: 521 FLHWYTGEGMDEMEFTEAASNMADLISEYQQYQEAT 414
FLHWYTGEGMDEMEFTEA SNM DL++EYQQYQ+AT
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDAT 429
Score = 41.5 bits (93), Expect = 8e-04
Identities = 17/25 (68%), Positives = 22/25 (88%)
Frame = -3
Query: 753 FRXRMSMREVDDQILAIQNKNSSYF 679
FR +MS +EVD+Q+L +QNKNSSYF
Sbjct: 317 FRGKMSTKEVDEQMLNVQNKNSSYF 341
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 160 bits (389), Expect = 1e-39
Identities = 69/96 (71%), Positives = 84/96 (87%)
Frame = -1
Query: 701 RTRTRATFVEWIPXNLKVXVCDIPPRGLKMSATFIGNSTAIQEIFKRISEQFTAMFRRRA 522
+ + + FVEWIP N+K VCDIPP GL M++TF+GNST+IQE+F+R+SEQFTAMFRR+A
Sbjct: 350 QNKNSSYFVEWIPNNVKSSVCDIPPVGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKA 409
Query: 521 FLHWYTGEGMDEMEFTEAASNMADLISEYQQYQEAT 414
FLHWYT EGMDEMEFTEA SNM DL++EYQQYQ+AT
Sbjct: 410 FLHWYTSEGMDEMEFTEAESNMNDLVAEYQQYQDAT 445
Score = 41.9 bits (94), Expect = 6e-04
Identities = 17/25 (68%), Positives = 22/25 (88%)
Frame = -3
Query: 753 FRXRMSMREVDDQILAIQNKNSSYF 679
FR RMS +EVD+Q++ +QNKNSSYF
Sbjct: 333 FRGRMSTKEVDEQMINVQNKNSSYF 357
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 80.6 bits (190), Expect = 1e-15
Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 8/99 (8%)
Frame = -1
Query: 701 RTRTRATFVEWIPXNLKVXVCDIPPRGL--------KMSATFIGNSTAIQEIFKRISEQF 546
+TR FV+W P K + PP + + + I N+TA+ E+F RI +F
Sbjct: 417 KTRRTVQFVDWCPTGFKCGINYQPPTAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKF 476
Query: 545 TAMFRRRAFLHWYTGEGMDEMEFTEAASNMADLISEYQQ 429
M+ +RAF+HWY GEGM+E EF+EA ++A L +Y++
Sbjct: 477 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 515
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 78.2 bits (184), Expect = 7e-15
Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 8/99 (8%)
Frame = -1
Query: 701 RTRTRATFVEWIPXNLKVXVCDIPPR--------GLKMSATFIGNSTAIQEIFKRISEQF 546
+T+ FV+W P K + PP ++ + I N+TA+ E+F RI +F
Sbjct: 336 KTKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKF 395
Query: 545 TAMFRRRAFLHWYTGEGMDEMEFTEAASNMADLISEYQQ 429
M+ +RAF+HWY GEGM+E EF+EA ++A L +Y++
Sbjct: 396 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 77.4 bits (182), Expect = 1e-14
Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 8/99 (8%)
Frame = -1
Query: 701 RTRTRATFVEWIPXNLKVXVCDIPPR--------GLKMSATFIGNSTAIQEIFKRISEQF 546
+T+ FV+W P K + PP ++ + I NST++ E+F RI +F
Sbjct: 336 KTKRTIQFVDWCPTGFKCGINYQPPSVVPSGDLAKVQRAVCMISNSTSVVEVFSRIDHKF 395
Query: 545 TAMFRRRAFLHWYTGEGMDEMEFTEAASNMADLISEYQQ 429
M+ +RAF+HWY GEGM+E EF+EA ++A L +Y++
Sbjct: 396 DLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 76.2 bits (179), Expect = 3e-14
Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 8/99 (8%)
Frame = -1
Query: 701 RTRTRATFVEWIPXNLKVXVCDIPPR--------GLKMSATFIGNSTAIQEIFKRISEQF 546
+T+ FV+W P K + PP ++ + I NST++ E+F RI +F
Sbjct: 336 KTKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKF 395
Query: 545 TAMFRRRAFLHWYTGEGMDEMEFTEAASNMADLISEYQQ 429
M+ +RAF+HWY GEGM+E EF+EA ++A L +Y++
Sbjct: 396 DLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 34.7 bits (76), Expect = 0.086
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Frame = -1
Query: 701 RTRTRATFVEWIPXNLKVXVCDIPPRGLKMSATFIGNSTAIQEIFKRISEQFTAMFRRRA 522
R R F+EW P +++V S + N T+I+ +F + Q+ + +++A
Sbjct: 343 RERKLVNFIEWGPASIQV------------SGLMLANHTSIRHLFSKCLGQYEKLRKKQA 390
Query: 521 FLHWYTG----EGMDEMEFTEAASNMADLISEYQ 432
FL Y E D EF E+ + L+ EY+
Sbjct: 391 FLDNYRKFPMFEDNDLSEFDESREIIESLVDEYK 424
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,383,358
Number of Sequences: 37544
Number of extensions: 303268
Number of successful extensions: 727
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 723
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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