Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_B10
(797 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 177 7e-45
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 176 2e-44
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 176 2e-44
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 174 5e-44
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 174 7e-44
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 174 7e-44
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 113 2e-25
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 113 2e-25
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 80 2e-15
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 79 3e-15
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 79 3e-15
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 76 3e-14
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 76 3e-14
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 76 3e-14
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 75 4e-14
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 75 4e-14
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 75 4e-14
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 75 4e-14
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 74 1e-13
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 74 1e-13
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 74 1e-13
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 74 1e-13
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 73 2e-13
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 68 9e-12
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 65 6e-11
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 30 2.2
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 30 2.2
Z47357-5|CAA87424.1| 446|Caenorhabditis elegans Hypothetical pr... 28 6.7
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 177 bits (431), Expect = 7e-45
Identities = 80/96 (83%), Positives = 87/96 (90%)
Frame = -1
Query: 701 RTRTRATFVEWIPXNLKVXVCDIPPRGLKMSATFIGNSTAIQEIFKRISEQFTAMFRRRA 522
+ + + FVEWIP N+K VCDIPPRGLKMSATFIGNSTAIQE+FKRISEQFTAMFRR+A
Sbjct: 334 QNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKA 393
Query: 521 FLHWYTGEGMDEMEFTEAASNMADLISEYQQYQEAT 414
FLHWYTGEGMDEMEFTEA SNM DL+SEYQQYQEAT
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAT 429
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/25 (80%), Positives = 23/25 (92%)
Frame = -3
Query: 753 FRXRMSMREVDDQILAIQNKNSSYF 679
FR RMSMREVDDQ++ +QNKNSSYF
Sbjct: 317 FRGRMSMREVDDQMMNVQNKNSSYF 341
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 176 bits (428), Expect = 2e-44
Identities = 79/96 (82%), Positives = 87/96 (90%)
Frame = -1
Query: 701 RTRTRATFVEWIPXNLKVXVCDIPPRGLKMSATFIGNSTAIQEIFKRISEQFTAMFRRRA 522
+ + + FVEWIP N+K VCDIPPRGLKM+ATF+GNSTAIQE+FKRISEQFTAMFRR+A
Sbjct: 334 QNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFVGNSTAIQELFKRISEQFTAMFRRKA 393
Query: 521 FLHWYTGEGMDEMEFTEAASNMADLISEYQQYQEAT 414
FLHWYTGEGMDEMEFTEA SNM DLISEYQQYQEAT
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEAT 429
Score = 47.6 bits (108), Expect = 1e-05
Identities = 20/25 (80%), Positives = 24/25 (96%)
Frame = -3
Query: 753 FRXRMSMREVDDQILAIQNKNSSYF 679
FR RMSMREVD+Q+L++QNKNSSYF
Sbjct: 317 FRGRMSMREVDEQMLSVQNKNSSYF 341
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 176 bits (428), Expect = 2e-44
Identities = 79/96 (82%), Positives = 87/96 (90%)
Frame = -1
Query: 701 RTRTRATFVEWIPXNLKVXVCDIPPRGLKMSATFIGNSTAIQEIFKRISEQFTAMFRRRA 522
+ + + FVEWIP N+K VCDIPPRGLKM+ATF+GNSTAIQE+FKRISEQFTAMFRR+A
Sbjct: 334 QNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFVGNSTAIQELFKRISEQFTAMFRRKA 393
Query: 521 FLHWYTGEGMDEMEFTEAASNMADLISEYQQYQEAT 414
FLHWYTGEGMDEMEFTEA SNM DLISEYQQYQEAT
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEAT 429
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/25 (80%), Positives = 23/25 (92%)
Frame = -3
Query: 753 FRXRMSMREVDDQILAIQNKNSSYF 679
FR RMSMREVD+Q+L +QNKNSSYF
Sbjct: 317 FRGRMSMREVDEQMLNVQNKNSSYF 341
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 174 bits (424), Expect = 5e-44
Identities = 77/96 (80%), Positives = 87/96 (90%)
Frame = -1
Query: 701 RTRTRATFVEWIPXNLKVXVCDIPPRGLKMSATFIGNSTAIQEIFKRISEQFTAMFRRRA 522
+ + + FVEWIP N+K VCDIPPRG+KM+ATF+GNSTAIQE+FKRISEQFTAMFRR+A
Sbjct: 334 QNKNSSYFVEWIPNNVKTAVCDIPPRGVKMAATFVGNSTAIQELFKRISEQFTAMFRRKA 393
Query: 521 FLHWYTGEGMDEMEFTEAASNMADLISEYQQYQEAT 414
FLHWYTGEGMDEMEFTEA SNM DL+SEYQQYQEAT
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAT 429
Score = 45.2 bits (102), Expect = 5e-05
Identities = 19/25 (76%), Positives = 23/25 (92%)
Frame = -3
Query: 753 FRXRMSMREVDDQILAIQNKNSSYF 679
FR RMSM+EVD+Q+L +QNKNSSYF
Sbjct: 317 FRGRMSMKEVDEQMLNVQNKNSSYF 341
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 174 bits (423), Expect = 7e-44
Identities = 78/95 (82%), Positives = 86/95 (90%)
Frame = -1
Query: 701 RTRTRATFVEWIPXNLKVXVCDIPPRGLKMSATFIGNSTAIQEIFKRISEQFTAMFRRRA 522
+ + + FV+WIP N+K VCDIPPRGLKMSATFIGNSTAIQE+FKRISEQFTAMFRR+A
Sbjct: 334 QNKNSSYFVDWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKA 393
Query: 521 FLHWYTGEGMDEMEFTEAASNMADLISEYQQYQEA 417
FLHWYTGEGMDEMEFTEA SNM DL+SEYQQYQEA
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEA 428
Score = 45.6 bits (103), Expect = 4e-05
Identities = 20/25 (80%), Positives = 23/25 (92%)
Frame = -3
Query: 753 FRXRMSMREVDDQILAIQNKNSSYF 679
FR RMSM+EVD+Q+L IQNKNSSYF
Sbjct: 317 FRGRMSMKEVDEQMLNIQNKNSSYF 341
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 174 bits (423), Expect = 7e-44
Identities = 78/95 (82%), Positives = 86/95 (90%)
Frame = -1
Query: 701 RTRTRATFVEWIPXNLKVXVCDIPPRGLKMSATFIGNSTAIQEIFKRISEQFTAMFRRRA 522
+ + + FV+WIP N+K VCDIPPRGLKMSATFIGNSTAIQE+FKRISEQFTAMFRR+A
Sbjct: 334 QNKNSSYFVDWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKA 393
Query: 521 FLHWYTGEGMDEMEFTEAASNMADLISEYQQYQEA 417
FLHWYTGEGMDEMEFTEA SNM DL+SEYQQYQEA
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEA 428
Score = 45.6 bits (103), Expect = 4e-05
Identities = 20/25 (80%), Positives = 23/25 (92%)
Frame = -3
Query: 753 FRXRMSMREVDDQILAIQNKNSSYF 679
FR RMSM+EVD+Q+L IQNKNSSYF
Sbjct: 317 FRGRMSMKEVDEQMLNIQNKNSSYF 341
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 113 bits (271), Expect = 2e-25
Identities = 53/86 (61%), Positives = 66/86 (76%)
Frame = -1
Query: 677 VEWIPXNLKVXVCDIPPRGLKMSATFIGNSTAIQEIFKRISEQFTAMFRRRAFLHWYTGE 498
+E +P + VCDIP RGLK SATFI NSTAIQE KRIS+QF +FRR+AFLHWYT
Sbjct: 340 IESLPKSTNTDVCDIPSRGLKTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT-- 397
Query: 497 GMDEMEFTEAASNMADLISEYQQYQE 420
M+E EFT+A + + DLISE+QQY++
Sbjct: 398 -MEESEFTDAENKVNDLISEFQQYEK 422
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 113 bits (271), Expect = 2e-25
Identities = 53/86 (61%), Positives = 66/86 (76%)
Frame = -1
Query: 677 VEWIPXNLKVXVCDIPPRGLKMSATFIGNSTAIQEIFKRISEQFTAMFRRRAFLHWYTGE 498
+E +P + VCDIP RGLK SATFI NSTAIQE KRIS+QF +FRR+AFLHWYT
Sbjct: 340 IESLPKSTNTDVCDIPSRGLKTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT-- 397
Query: 497 GMDEMEFTEAASNMADLISEYQQYQE 420
M+E EFT+A + + DLISE+QQY++
Sbjct: 398 -MEESEFTDAENKVNDLISEFQQYEK 422
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 80.2 bits (189), Expect = 2e-15
Identities = 39/102 (38%), Positives = 59/102 (57%), Gaps = 8/102 (7%)
Frame = -1
Query: 710 SPYRTRTRATFVEWIPXNLKVXVCDIPPR--------GLKMSATFIGNSTAIQEIFKRIS 555
S +T+ FV+W P KV + PP L+ + + N+TAIQE + R+
Sbjct: 333 STIKTKRAIQFVDWCPTGFKVGINYQPPTVVPGGDMAKLQRAVCMLSNTTAIQEAWARLD 392
Query: 554 EQFTAMFRRRAFLHWYTGEGMDEMEFTEAASNMADLISEYQQ 429
+F M+ +RAF+HWY GEGM+E EF+EA +MA L +Y++
Sbjct: 393 HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 434
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 79.4 bits (187), Expect = 3e-15
Identities = 41/105 (39%), Positives = 58/105 (55%), Gaps = 8/105 (7%)
Frame = -1
Query: 701 RTRTRATFVEWIPXNLKVXVCDIPPRGLK--------MSATFIGNSTAIQEIFKRISEQF 546
+T+ FVEW P KV + PP + S I N+TAI E + R+ +F
Sbjct: 342 KTKRTVQFVEWCPTGFKVGINYQPPTVVPGGDLGKQTRSVCMISNTTAIAEAWARLDHKF 401
Query: 545 TAMFRRRAFLHWYTGEGMDEMEFTEAASNMADLISEYQQYQEATL 411
M+ +RAF+HWY GEGM+E EF+EA +MA L +Y++ E L
Sbjct: 402 DLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEIGEDEL 446
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 79.4 bits (187), Expect = 3e-15
Identities = 41/105 (39%), Positives = 58/105 (55%), Gaps = 8/105 (7%)
Frame = -1
Query: 701 RTRTRATFVEWIPXNLKVXVCDIPPRGLK--------MSATFIGNSTAIQEIFKRISEQF 546
+T+ FVEW P KV + PP + S I N+TAI E + R+ +F
Sbjct: 314 KTKRTVQFVEWCPTGFKVGINYQPPTVVPGGDLGKQTRSVCMISNTTAIAEAWARLDHKF 373
Query: 545 TAMFRRRAFLHWYTGEGMDEMEFTEAASNMADLISEYQQYQEATL 411
M+ +RAF+HWY GEGM+E EF+EA +MA L +Y++ E L
Sbjct: 374 DLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEIGEDEL 418
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 75.8 bits (178), Expect = 3e-14
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 8/105 (7%)
Frame = -1
Query: 719 TKSSPYRTRTRATFVEWIPXNLKVXVCDIPPR--------GLKMSATFIGNSTAIQEIFK 564
T + +T+ FV+W P KV + PP + + + N+TAI E +
Sbjct: 328 TAITAIKTKRSVQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWS 387
Query: 563 RISEQFTAMFRRRAFLHWYTGEGMDEMEFTEAASNMADLISEYQQ 429
R+ +F M+ +RAF+HWY GEGM+E EFTEA ++A L +Y++
Sbjct: 388 RLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 75.8 bits (178), Expect = 3e-14
Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 8/99 (8%)
Frame = -1
Query: 701 RTRTRATFVEWIPXNLKVXVCDIPPR--------GLKMSATFIGNSTAIQEIFKRISEQF 546
+T+ FV+W P KV + PP L+ + + N+TAI E + R+ +F
Sbjct: 341 KTKRSIQFVDWCPTGFKVGINYQPPTVVPGADLSKLQRAVCMLSNTTAIAEAWARLDHKF 400
Query: 545 TAMFRRRAFLHWYTGEGMDEMEFTEAASNMADLISEYQQ 429
M+ +RAF+HWY GEGM+E EF+EA ++A L +Y++
Sbjct: 401 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 439
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 75.8 bits (178), Expect = 3e-14
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 8/105 (7%)
Frame = -1
Query: 719 TKSSPYRTRTRATFVEWIPXNLKVXVCDIPPR--------GLKMSATFIGNSTAIQEIFK 564
T + +T+ FV+W P KV + PP + + + N+TAI E +
Sbjct: 328 TAITAIKTKRSVQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWS 387
Query: 563 RISEQFTAMFRRRAFLHWYTGEGMDEMEFTEAASNMADLISEYQQ 429
R+ +F M+ +RAF+HWY GEGM+E EFTEA ++A L +Y++
Sbjct: 388 RLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 75.4 bits (177), Expect = 4e-14
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 8/105 (7%)
Frame = -1
Query: 719 TKSSPYRTRTRATFVEWIPXNLKVXVCDIPPR--------GLKMSATFIGNSTAIQEIFK 564
T + +T+ FV+W P KV + PP + + + N+TAI E +
Sbjct: 328 TAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWS 387
Query: 563 RISEQFTAMFRRRAFLHWYTGEGMDEMEFTEAASNMADLISEYQQ 429
R+ +F M+ +RAF+HWY GEGM+E EFTEA ++A L +Y++
Sbjct: 388 RLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 75.4 bits (177), Expect = 4e-14
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 8/105 (7%)
Frame = -1
Query: 719 TKSSPYRTRTRATFVEWIPXNLKVXVCDIPPR--------GLKMSATFIGNSTAIQEIFK 564
T + +T+ FV+W P KV + PP + + + N+TAI E +
Sbjct: 328 TAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWS 387
Query: 563 RISEQFTAMFRRRAFLHWYTGEGMDEMEFTEAASNMADLISEYQQ 429
R+ +F M+ +RAF+HWY GEGM+E EFTEA ++A L +Y++
Sbjct: 388 RLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 75.4 bits (177), Expect = 4e-14
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 8/105 (7%)
Frame = -1
Query: 719 TKSSPYRTRTRATFVEWIPXNLKVXVCDIPPR--------GLKMSATFIGNSTAIQEIFK 564
T + +T+ FV+W P KV + PP + + + N+TAI E +
Sbjct: 328 TAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWS 387
Query: 563 RISEQFTAMFRRRAFLHWYTGEGMDEMEFTEAASNMADLISEYQQ 429
R+ +F M+ +RAF+HWY GEGM+E EFTEA ++A L +Y++
Sbjct: 388 RLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 75.4 bits (177), Expect = 4e-14
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 8/105 (7%)
Frame = -1
Query: 719 TKSSPYRTRTRATFVEWIPXNLKVXVCDIPPR--------GLKMSATFIGNSTAIQEIFK 564
T + +T+ FV+W P KV + PP + + + N+TAI E +
Sbjct: 328 TAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWS 387
Query: 563 RISEQFTAMFRRRAFLHWYTGEGMDEMEFTEAASNMADLISEYQQ 429
R+ +F M+ +RAF+HWY GEGM+E EFTEA ++A L +Y++
Sbjct: 388 RLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 73.7 bits (173), Expect = 1e-13
Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Frame = -1
Query: 701 RTRTRATFVEWIPXNLKVXVCDIPPR--------GLKMSATFIGNSTAIQEIFKRISEQF 546
+T+ FV+W P KV + PP + + + N+TAI E + R+ +F
Sbjct: 336 KTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKF 395
Query: 545 TAMFRRRAFLHWYTGEGMDEMEFTEAASNMADLISEYQQ 429
M+ +RAF+HWY GEGM+E EF+EA ++A L +Y++
Sbjct: 396 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 73.7 bits (173), Expect = 1e-13
Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Frame = -1
Query: 701 RTRTRATFVEWIPXNLKVXVCDIPPR--------GLKMSATFIGNSTAIQEIFKRISEQF 546
+T+ FV+W P KV + PP + + + N+TAI E + R+ +F
Sbjct: 335 KTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKF 394
Query: 545 TAMFRRRAFLHWYTGEGMDEMEFTEAASNMADLISEYQQ 429
M+ +RAF+HWY GEGM+E EF+EA ++A L +Y++
Sbjct: 395 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 433
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 73.7 bits (173), Expect = 1e-13
Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Frame = -1
Query: 701 RTRTRATFVEWIPXNLKVXVCDIPPR--------GLKMSATFIGNSTAIQEIFKRISEQF 546
+T+ FV+W P KV + PP + + + N+TAI E + R+ +F
Sbjct: 336 KTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKF 395
Query: 545 TAMFRRRAFLHWYTGEGMDEMEFTEAASNMADLISEYQQ 429
M+ +RAF+HWY GEGM+E EF+EA ++A L +Y++
Sbjct: 396 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 73.7 bits (173), Expect = 1e-13
Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Frame = -1
Query: 701 RTRTRATFVEWIPXNLKVXVCDIPPR--------GLKMSATFIGNSTAIQEIFKRISEQF 546
+T+ FV+W P KV + PP + + + N+TAI E + R+ +F
Sbjct: 336 KTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKF 395
Query: 545 TAMFRRRAFLHWYTGEGMDEMEFTEAASNMADLISEYQQ 429
M+ +RAF+HWY GEGM+E EF+EA ++A L +Y++
Sbjct: 396 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 72.9 bits (171), Expect = 2e-13
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 8/99 (8%)
Frame = -1
Query: 701 RTRTRATFVEWIPXNLKVXVCDIPPRGLK--------MSATFIGNSTAIQEIFKRISEQF 546
+T+ FV+W P KV + PP + + + N+TAI E ++R+ +F
Sbjct: 331 KTQRSVQFVDWCPTGFKVGLNYQPPTVIPGGDMAKVPRAVCMLSNTTAIAEAWQRLDYKF 390
Query: 545 TAMFRRRAFLHWYTGEGMDEMEFTEAASNMADLISEYQQ 429
M+ +RAF+HWY GEGM+E EF+EA ++A L +Y++
Sbjct: 391 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 429
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 67.7 bits (158), Expect = 9e-12
Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Frame = -1
Query: 710 SPYRTRTRATFVEWIPXNLKVXV---CDIPPRG-----LKMSATFIGNSTAIQEIFKRIS 555
S + + FV+W P KV + I G + + + N+TAI E + R+
Sbjct: 336 SSVKAKRGINFVDWCPTGFKVGINYQAPITVEGGDLAKVHRAVCMLSNTTAIAEAWARLD 395
Query: 554 EQFTAMFRRRAFLHWYTGEGMDEMEFTEAASNMADLISEYQQYQEAT 414
+F M+ +RAF+HW+ GEGM+E EF EA ++A L +Y + T
Sbjct: 396 HKFDLMYSKRAFVHWFVGEGMEEGEFMEARDDLAALEKDYAEVSRDT 442
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 64.9 bits (151), Expect = 6e-11
Identities = 26/57 (45%), Positives = 41/57 (71%)
Frame = -1
Query: 599 IGNSTAIQEIFKRISEQFTAMFRRRAFLHWYTGEGMDEMEFTEAASNMADLISEYQQ 429
+ ++TAI E + R+ +F M+ +RAF+HWY GEGM+E EFTEA ++A L +Y++
Sbjct: 13 LSDTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 69
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/63 (22%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = -1
Query: 617 KMSATFIGNSTAIQEIFKRISEQFTAMFRRRAFLHWYTGEGMDEMEFTEAASNMA-DLIS 441
K+S + NST++ +F+ + ++ + +RAF+ + ++ + A ++ DL+
Sbjct: 370 KVSGLLLNNSTSVAPLFESLLSKYDKLRSKRAFIDKFEKIDNFSLDMMDDAMHIVQDLLD 429
Query: 440 EYQ 432
EY+
Sbjct: 430 EYK 432
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/63 (22%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = -1
Query: 617 KMSATFIGNSTAIQEIFKRISEQFTAMFRRRAFLHWYTGEGMDEMEFTEAASNMA-DLIS 441
K+S + NST++ +F+ + ++ + +RAF+ + ++ + A ++ DL+
Sbjct: 370 KVSGLLLNNSTSVAPLFESLLSKYDKLRSKRAFIDKFEKIDNFSLDMMDDAMHIVQDLLD 429
Query: 440 EYQ 432
EY+
Sbjct: 430 EYK 432
>Z47357-5|CAA87424.1| 446|Caenorhabditis elegans Hypothetical
protein ZK1128.5 protein.
Length = 446
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -3
Query: 666 PXQPKGXRVRHPAARPQDVRHVHR*LDGHTGDLQAH 559
P P+G R HPA Q R ++ L G T +Q +
Sbjct: 7 PPVPQGPRFNHPATPQQVRRPINAPLPGQTAQIQGN 42
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,481,052
Number of Sequences: 27780
Number of extensions: 249808
Number of successful extensions: 622
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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