Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_B08
(822 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0747 - 20728073-20728081,20728167-20728353,20728810-207289... 31 1.5
08_02_1603 - 28156141-28157025,28157547-28157999 30 1.9
06_03_1310 + 29238644-29240260 30 1.9
08_02_1123 + 24474434-24474538,24474800-24474860,24475050-244754... 30 2.6
08_01_0698 + 6162127-6162160,6162317-6162512,6162654-6162699 30 2.6
03_06_0617 - 35124114-35124148,35124243-35124335,35124415-351249... 30 2.6
03_02_0884 + 12160453-12160518,12160598-12160696,12163223-121633... 30 2.6
02_05_0359 - 28269236-28269541,28270857-28270919,28271439-282714... 29 3.4
03_06_0212 + 32400982-32402055 29 4.5
01_05_0791 + 25267885-25267930,25268258-25268713,25268802-252688... 29 4.5
11_06_0131 - 20416257-20417635,20419525-20419905,20420703-20423415 29 5.9
02_05_0112 - 25931775-25932078,25932554-25932732,25934033-25935184 29 5.9
01_06_0412 + 29159918-29160046,29160148-29160297,29160385-291604... 29 5.9
01_03_0131 - 12858377-12858664,12859585-12859975,12863357-128633... 29 5.9
08_02_1240 + 25504789-25504794,25505421-25505555,25505854-255059... 28 7.8
05_06_0262 - 26746180-26746278,26746371-26746493,26746584-267467... 28 7.8
05_02_0081 + 6432957-6433289,6433367-6433882,6434283-6434570 28 7.8
03_05_0642 - 26346260-26346367,26347902-26348162,26348542-263498... 28 7.8
02_04_0144 - 20177136-20177231,20177525-20178010,20178103-20178162 28 7.8
01_01_1142 - 9057212-9057541,9058650-9058754,9058826-9058919,905... 28 7.8
>08_02_0747 -
20728073-20728081,20728167-20728353,20728810-20728913,
20729008-20729139,20729583-20729810,20730263-20730358,
20730440-20730511,20730588-20730760,20730947-20731000,
20731086-20731134,20731228-20731326,20731420-20731511,
20731607-20731832,20731927-20732100,20732186-20732809,
20732890-20733033,20733108-20733218,20733516-20733650,
20733963-20733989
Length = 911
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +2
Query: 461 TSHSTNRIATHRNIFDRNCSSSN*AVPRGAALGLGSPKLNVEVKIPNGKAPIPNDMWNP 637
T+H + I + N N AV + SPK N + + + K PIPN+ +NP
Sbjct: 475 TTHENSGIEPDHEPVEENNDDVNQAVQKNNNF-TSSPKGNSKTVLDDDKLPIPNEEFNP 532
>08_02_1603 - 28156141-28157025,28157547-28157999
Length = 445
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -2
Query: 218 KLKKSNSVSPSATANLNVAINSKLFYFLPLX*RQRLGSAPGIAEVHGR 75
+L S P A A ++ +++ L YF PL R R G +HG+
Sbjct: 50 RLPNGASDFPDAVARMSASLSDALAYFYPLAGRIRQDDHDGSLSIHGQ 97
>06_03_1310 + 29238644-29240260
Length = 538
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 752 PLYGEEPKQXTPETSAPPPAGQRTEPESTSGFP 654
P Y E PK P +++PP + + P S+S P
Sbjct: 414 PTYSESPKSSMPPSTSPPSSHGASPPSSSSSPP 446
>08_02_1123 +
24474434-24474538,24474800-24474860,24475050-24475477,
24475915-24476231,24476991-24477216,24477302-24477547,
24477635-24477745,24478051-24478182,24478297-24478325,
24478352-24478502
Length = 601
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 637 SPKPKPGKPLVLSGSVRCPAGGGALVSG 720
+P P P P V SGSV GGG L++G
Sbjct: 146 APAPSPAAPRVGSGSVCGCGGGGGLLTG 173
>08_01_0698 + 6162127-6162160,6162317-6162512,6162654-6162699
Length = 91
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 743 GEEPKQXTPETSAPPPAGQRTEPESTSGFP-GFGFGEDST 627
G++ +Q P APPPAG T+ +P G G GE ++
Sbjct: 21 GQQQQQAYPAYVAPPPAGYPTKDGPQEQYPAGAGAGETTS 60
>03_06_0617 -
35124114-35124148,35124243-35124335,35124415-35124919,
35125039-35125238,35125514-35125604,35125699-35126769
Length = 664
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 1/72 (1%)
Frame = +1
Query: 451 SGEHQPQHEQDSDPQ-EYXXXXXXXXXXXXXXRRGARPWITKIKCRGENSKREGSYPERH 627
SGEH P ++ +DP+ +Y R AR T +K R ++ PE
Sbjct: 458 SGEHHPDDQECNDPENQYHEGEPYDHVIEQEPERDARETGTSMKLRNRRKLQKDGIPEHT 517
Query: 628 VESSPKPKPGKP 663
+ G+P
Sbjct: 518 ADDIMDEDFGEP 529
>03_02_0884 +
12160453-12160518,12160598-12160696,12163223-12163357,
12163841-12163891,12164070-12164693,12164779-12164952,
12165047-12165272,12165368-12165459,12165551-12165649,
12165743-12165791,12165878-12165931,12166235-12166290,
12166367-12166438,12166520-12166615,12167069-12167418,
12167508-12167679,12167777-12167875,12167959-12168090,
12168185-12168288,12168369-12168401,12168744-12168930,
12169016-12169024
Length = 992
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 464 SHSTNRIATHRNIFDRNCSSSN*AVPRGAALGLGSPKLNVEVKIPNGKAPIPNDMWNP 637
+H + I + N N AV + SPK N ++ + + K PIPN+ +NP
Sbjct: 454 AHENSGIEPDHEPVEENNDDVNQAVQKNNNF-TSSPKGNSKIVLDDDKLPIPNEEFNP 510
>02_05_0359 -
28269236-28269541,28270857-28270919,28271439-28271459,
28271660-28271716,28271789-28271874,28271982-28272039,
28272176-28272311,28272799-28273073,28273564-28273602,
28274052-28274143,28274422-28274454,28275041-28275088,
28275191-28275323
Length = 448
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/51 (33%), Positives = 21/51 (41%)
Frame = -1
Query: 795 TTCISCSASAERXDPAXWRGTQAXDPRNKCPPAGRTAHGAGEYERLPRFRL 643
TTC+S E P WR + A KCP RT G G + F +
Sbjct: 399 TTCLS--GCREAGGPWTWRESPASRAMQKCPACKRTHTGDGRTVKPAHFNV 447
>03_06_0212 + 32400982-32402055
Length = 357
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +1
Query: 571 KIKCRGENSKREGSYPERHVESSPKPKPG-KPLVLSGSVRCPAGGGALVSGVXCL 732
K C + +GS E V S+P L+++G AGGGA+ +G C+
Sbjct: 145 KSGCSSTSETSKGSDKEVTVASAPAQAASFTELLIAGVAASSAGGGAIGNGADCV 199
>01_05_0791 +
25267885-25267930,25268258-25268713,25268802-25268832,
25268949-25269255
Length = 279
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -2
Query: 734 PKQXTPETSAPPPAGQRTEPESTSGFPGFGFGEDS 630
P TP+T P G T P+ S P GFG +S
Sbjct: 207 PTPTTPDTGTPIYGGSTTPPDYGSMSPPGGFGSNS 241
>11_06_0131 - 20416257-20417635,20419525-20419905,20420703-20423415
Length = 1490
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 488 THRNIFDRNCSSSN*AVPRGAALG-LGSPKLNVEVKIPNGKAPIPNDMWN 634
T FD +C+ + A+P ++LG L S L + ++ N IPN +WN
Sbjct: 211 TSLQYFDLSCNRLSGAIP--SSLGQLSSSLLTMNLRQNNLSGMIPNSIWN 258
>02_05_0112 - 25931775-25932078,25932554-25932732,25934033-25935184
Length = 544
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 616 PERHVESSPKPKPGKPLVLSGSVRCPAGGG 705
P E P+P PG+PLV+ + P+GGG
Sbjct: 68 PPASAEHLPEPSPGEPLVVDVYL-TPSGGG 96
>01_06_0412 +
29159918-29160046,29160148-29160297,29160385-29160447,
29160540-29160716,29160796-29160899,29162142-29162249,
29162336-29162432,29162540-29162637,29162718-29162859,
29162941-29163063,29163161-29163259
Length = 429
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 566 SPKLNVEVKIPNGKAPIPNDMWNPRRSRNLGSRSYSP 676
S NVE+++P +P+D NP ++GS +Y+P
Sbjct: 309 STATNVEIEVP-----VPSDATNPNIRTSMGSAAYAP 340
>01_03_0131 -
12858377-12858664,12859585-12859975,12863357-12863397,
12864745-12865419
Length = 464
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -1
Query: 741 RGTQAXDPRNKCPPAGRTAHGAGEYERLPRFRLRRGFHMSFG 616
R A PR++C P+G TA G+G+ + RL G H G
Sbjct: 51 RRDDAFLPRSRCSPSGATADGSGDGD---SGRLGDGDHAGLG 89
>08_02_1240 +
25504789-25504794,25505421-25505555,25505854-25505964,
25506091-25506183,25506264-25506884,25506970-25507143,
25507239-25507464,25507560-25507651,25507744-25507842,
25507936-25507984,25508071-25508124,25508312-25508484,
25508561-25508632,25508713-25508808,25509032-25509048,
25509704-25509875,25509973-25510071,25510381-25510484,
25510940-25511126,25511212-25511220
Length = 862
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +2
Query: 464 SHSTNRIATHRNIFDRNCSSSN*AVPRGAALGLGSPKLNVEVKIPNGKAPIPNDMWNP 637
+H + I + N N AV + SPK N + + + K PIPN+ +NP
Sbjct: 451 AHENSGIEPDHEPVEENNDDVNQAVKKNNNF-TSSPKGNSKTILDDDKLPIPNEEFNP 507
>05_06_0262 -
26746180-26746278,26746371-26746493,26746584-26746725,
26746824-26746921,26747012-26747108,26747215-26747322,
26747900-26748003,26748170-26748268,26748373-26748435,
26748538-26748687,26748769-26748900
Length = 404
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 566 SPKLNVEVKIPNGKAPIPNDMWNPRRSRNLGSRSYSP 676
S NVE+++P +P D NP ++GS +Y+P
Sbjct: 284 STATNVEIEVP-----VPEDSTNPNIRTSMGSAAYAP 315
>05_02_0081 + 6432957-6433289,6433367-6433882,6434283-6434570
Length = 378
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = -2
Query: 746 YGEEPKQXTPETSAPPPAGQRTEPESTSGFPGFGFGEDS 630
+ +P + +P PPPA + P G G GF D+
Sbjct: 161 HSPDPPEPSPPPPPPPPASKSDHPAPLYGEGGGGFSWDA 199
>03_05_0642 - 26346260-26346367,26347902-26348162,26348542-26349849,
26349960-26350178,26350241-26350300,26352159-26352215,
26352945-26353029,26353486-26353843,26353931-26355170
Length = 1231
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/75 (22%), Positives = 31/75 (41%)
Frame = +1
Query: 436 STCGRSGEHQPQHEQDSDPQEYXXXXXXXXXXXXXXRRGARPWITKIKCRGENSKREGSY 615
ST GE++ + Q + Q +R + + K +G+N+KR GS
Sbjct: 1112 STSVGCGEYEGSNNQSQNQQRLVQVGGKQGAATQKPQRLSNARPAREKLKGDNAKRPGSR 1171
Query: 616 PERHVESSPKPKPGK 660
+ +SP +P +
Sbjct: 1172 TTQRSSTSPTTEPSQ 1186
>02_04_0144 - 20177136-20177231,20177525-20178010,20178103-20178162
Length = 213
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 608 APIPNDMWNPRRSRNLGSRSYSPAPCAVLPAGGHLFLGSXAWVPL 742
AP P+ W P R+ + + + +P A +GG F+ S VP+
Sbjct: 117 APSPSSSWAPARAPSPDASASAPDSAAPGQSGGTAFIRSSPAVPV 161
>01_01_1142 -
9057212-9057541,9058650-9058754,9058826-9058919,
9059721-9059917
Length = 241
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 756 DPAXWRGTQAXDPRNKCPPAGRTAHGA 676
DPA + + DP +CPPA A G+
Sbjct: 2 DPASVSASASGDPMAECPPAAAAAEGS 28
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,954,075
Number of Sequences: 37544
Number of extensions: 478975
Number of successful extensions: 1693
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1687
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2256438528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -