Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_B05
         (887 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0370 + 3275771-3275789,3275972-3276976,3277062-3277624           30   2.1  
04_04_0867 + 28865857-28866657,28866778-28867113,28867248-288674...    29   6.5  
08_01_0036 - 267236-268165,268255-268299,268485-268574,269485-26...    28   8.6  

>08_01_0370 + 3275771-3275789,3275972-3276976,3277062-3277624
          Length = 528

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = -2

Query: 331 F*HCACVWLEFYRFVGTCCV*VNMCPLFCTDVRVDGDYA 215
           F +CA   L  YR  G+  +  N+C +F T + V+G YA
Sbjct: 388 FMYCAIPALFLYRTYGSMSIMWNICLMFITGMFVNGPYA 426


>04_04_0867 +
           28865857-28866657,28866778-28867113,28867248-28867451,
           28867567-28867746
          Length = 506

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +2

Query: 218 VIPIYTDISTKQRTHIYLHTTCPYESVKFEPNTRTVLKTNDNSIG 352
           ++  +T++S K RT   L  TC Y       N   +LKTN  + G
Sbjct: 52  LLEYHTELSRKYRTFRMLTPTCNYVYTVEPANVEHILKTNFANYG 96


>08_01_0036 -
           267236-268165,268255-268299,268485-268574,269485-269805,
           269895-270098,271532-271664,271810-271881,273106-273168,
           273252-275034,275169-275217
          Length = 1229

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +2

Query: 404 RTLRTPRYLMSWHSLINHNSLQLIVFLH 487
           R L T  +L++W + + H+SL +  FLH
Sbjct: 119 RLLPTASHLLAWRTALAHSSLAVCRFLH 146


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,095,660
Number of Sequences: 37544
Number of extensions: 265786
Number of successful extensions: 673
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)