Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_B01
         (769 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0249 - 21853325-21853484,21853523-21853902,21854012-21854185     30   1.8  
03_01_0005 + 46370-46454,46962-47071,47381-47545,47672-48463,487...    28   9.4  

>09_06_0249 - 21853325-21853484,21853523-21853902,21854012-21854185
          Length = 237

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 18/61 (29%), Positives = 27/61 (44%)
 Frame = -3

Query: 644 RRIEVRSLRPRMRLFLYVYMSYGLRSRRFVYETWSRLSIGRHFLSTVVIDATNANHSSFD 465
           RR+E     PR+ L L V +S   R   F+   W    + RH L+    D ++ +    D
Sbjct: 111 RRVESLERGPRLHLSLIVEVSRADRVLGFICSAWHDELVVRHVLTLRDADGSSTSSGGRD 170

Query: 464 F 462
           F
Sbjct: 171 F 171


>03_01_0005 + 46370-46454,46962-47071,47381-47545,47672-48463,
            48730-48840,48935-49195,49415-49638,49735-49855,
            50673-51214,51302-51488,51569-51895,52047-52197,
            52287-52424,52918-53013,53276-53357,54411-54679,
            54769-54882,55050-55288,55488-55715,55799-55951,
            56479-56616,57061-57188,57598-57718,58142-58306,
            59486-59633,59772-59898,60025-60118,60119-60268,
            60577-60624,60712-60819,61040-61114,61225-61275,
            61341-61487,61584-61714,61944-62031,62204-62266,
            62336-62582,62830-62981,63056-63126,63214-63370,
            63520-63687
          Length = 2323

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = -2

Query: 165  IKSLMNLSEFKTRDQNRFPIGAHGVXGSDFVSCVYVVHVSARKRK 31
            ++S++ L  F  R +N   +G        FV   +++H+S  KR+
Sbjct: 1570 VRSVLGLLHFSMRTRNLSSLGISYEMMMQFVKSSWILHLSCNKRR 1614


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,447,568
Number of Sequences: 37544
Number of extensions: 324379
Number of successful extensions: 774
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 773
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)