Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_A24
(861 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 107 4e-23
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 107 4e-23
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 107 4e-23
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 107 4e-23
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 107 4e-23
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 107 4e-23
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 107 4e-23
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 107 4e-23
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 107 4e-23
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 107 4e-23
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 107 4e-23
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 107 4e-23
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 107 7e-23
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 103 6e-22
AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens ... 34 0.58
AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein. 34 0.58
AF349752-1|AAL83912.1| 1013|Homo sapiens amplified in breast can... 31 7.1
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 107 bits (258), Expect = 4e-23
Identities = 50/108 (46%), Positives = 68/108 (62%)
Frame = -2
Query: 617 PGGHXGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKV 438
PGGH GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++
Sbjct: 241 PGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRA 300
Query: 437 LRAPNKRVIRATRKLNPLTNKQGDAETQSLRGRAEEESYLRAAQKEEL 294
LRAP K++ R K NPL N + + + LR A+ +L
Sbjct: 301 LRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKL 348
Score = 31.5 bits (68), Expect = 4.1
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -3
Query: 409 VLHAN*TRSLTNKAMLKLNPYAAVLKRKAILELRRRKNLKA-LADAEKSGLKLSKRNPAM 233
VL N ++L + MLKLNPYA ++R IL R L+ A A + L+ A
Sbjct: 312 VLKKNPLKNL--RIMLKLNPYAKTMRRNTILRQARNHKLRVDKAAAAAAALQAKSDEKAA 369
Query: 232 KAEK 221
A K
Sbjct: 370 VAGK 373
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 107 bits (258), Expect = 4e-23
Identities = 50/108 (46%), Positives = 68/108 (62%)
Frame = -2
Query: 617 PGGHXGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKV 438
PGGH GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++
Sbjct: 242 PGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRA 301
Query: 437 LRAPNKRVIRATRKLNPLTNKQGDAETQSLRGRAEEESYLRAAQKEEL 294
LRAP K++ R K NPL N + + + LR A+ +L
Sbjct: 302 LRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 31.5 bits (68), Expect = 4.1
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -3
Query: 409 VLHAN*TRSLTNKAMLKLNPYAAVLKRKAILELRRRKNLKA-LADAEKSGLKLSKRNPAM 233
VL N ++L + MLKLNPYA ++R IL R L+ A A + L+ A
Sbjct: 313 VLKKNPLKNL--RIMLKLNPYAKTMRRNTILRQARNHKLRVDKAAAAAAALQAKSDEKAA 370
Query: 232 KAEK 221
A K
Sbjct: 371 VAGK 374
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 107 bits (258), Expect = 4e-23
Identities = 50/108 (46%), Positives = 68/108 (62%)
Frame = -2
Query: 617 PGGHXGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKV 438
PGGH GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++
Sbjct: 242 PGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRA 301
Query: 437 LRAPNKRVIRATRKLNPLTNKQGDAETQSLRGRAEEESYLRAAQKEEL 294
LRAP K++ R K NPL N + + + LR A+ +L
Sbjct: 302 LRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 31.5 bits (68), Expect = 4.1
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -3
Query: 409 VLHAN*TRSLTNKAMLKLNPYAAVLKRKAILELRRRKNLKA-LADAEKSGLKLSKRNPAM 233
VL N ++L + MLKLNPYA ++R IL R L+ A A + L+ A
Sbjct: 313 VLKKNPLKNL--RIMLKLNPYAKTMRRNTILRQARNHKLRVDKAAAAAAALQAKSDEKAA 370
Query: 232 KAEK 221
A K
Sbjct: 371 VAGK 374
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 107 bits (258), Expect = 4e-23
Identities = 50/108 (46%), Positives = 68/108 (62%)
Frame = -2
Query: 617 PGGHXGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKV 438
PGGH GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++
Sbjct: 242 PGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRA 301
Query: 437 LRAPNKRVIRATRKLNPLTNKQGDAETQSLRGRAEEESYLRAAQKEEL 294
LRAP K++ R K NPL N + + + LR A+ +L
Sbjct: 302 LRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 31.5 bits (68), Expect = 4.1
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -3
Query: 409 VLHAN*TRSLTNKAMLKLNPYAAVLKRKAILELRRRKNLKA-LADAEKSGLKLSKRNPAM 233
VL N ++L + MLKLNPYA ++R IL R L+ A A + L+ A
Sbjct: 313 VLKKNPLKNL--RIMLKLNPYAKTMRRNTILRQARNHKLRVDKAAAAAAALQAKSDEKAA 370
Query: 232 KAEK 221
A K
Sbjct: 371 VAGK 374
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 107 bits (258), Expect = 4e-23
Identities = 50/108 (46%), Positives = 68/108 (62%)
Frame = -2
Query: 617 PGGHXGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKV 438
PGGH GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++
Sbjct: 242 PGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRA 301
Query: 437 LRAPNKRVIRATRKLNPLTNKQGDAETQSLRGRAEEESYLRAAQKEEL 294
LRAP K++ R K NPL N + + + LR A+ +L
Sbjct: 302 LRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 31.5 bits (68), Expect = 4.1
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -3
Query: 409 VLHAN*TRSLTNKAMLKLNPYAAVLKRKAILELRRRKNLKA-LADAEKSGLKLSKRNPAM 233
VL N ++L + MLKLNPYA ++R IL R L+ A A + L+ A
Sbjct: 313 VLKKNPLKNL--RIMLKLNPYAKTMRRNTILRQARNHKLRVDKAAAAAAALQAKSDEKAA 370
Query: 232 KAEK 221
A K
Sbjct: 371 VAGK 374
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 107 bits (258), Expect = 4e-23
Identities = 50/108 (46%), Positives = 68/108 (62%)
Frame = -2
Query: 617 PGGHXGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKV 438
PGGH GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++
Sbjct: 242 PGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRA 301
Query: 437 LRAPNKRVIRATRKLNPLTNKQGDAETQSLRGRAEEESYLRAAQKEEL 294
LRAP K++ R K NPL N + + + LR A+ +L
Sbjct: 302 LRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 31.5 bits (68), Expect = 4.1
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -3
Query: 409 VLHAN*TRSLTNKAMLKLNPYAAVLKRKAILELRRRKNLKA-LADAEKSGLKLSKRNPAM 233
VL N ++L + MLKLNPYA ++R IL R L+ A A + L+ A
Sbjct: 313 VLKKNPLKNL--RIMLKLNPYAKTMRRNTILRQARNHKLRVDKAAAAAAALQAKSDEKAA 370
Query: 232 KAEK 221
A K
Sbjct: 371 VAGK 374
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 107 bits (258), Expect = 4e-23
Identities = 50/108 (46%), Positives = 68/108 (62%)
Frame = -2
Query: 617 PGGHXGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKV 438
PGGH GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++
Sbjct: 242 PGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRA 301
Query: 437 LRAPNKRVIRATRKLNPLTNKQGDAETQSLRGRAEEESYLRAAQKEEL 294
LRAP K++ R K NPL N + + + LR A+ +L
Sbjct: 302 LRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 31.5 bits (68), Expect = 4.1
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -3
Query: 409 VLHAN*TRSLTNKAMLKLNPYAAVLKRKAILELRRRKNLKA-LADAEKSGLKLSKRNPAM 233
VL N ++L + MLKLNPYA ++R IL R L+ A A + L+ A
Sbjct: 313 VLKKNPLKNL--RIMLKLNPYAKTMRRNTILRQARNHKLRVDKAAAAAAALQAKSDEKAA 370
Query: 232 KAEK 221
A K
Sbjct: 371 VAGK 374
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 107 bits (258), Expect = 4e-23
Identities = 50/108 (46%), Positives = 68/108 (62%)
Frame = -2
Query: 617 PGGHXGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKV 438
PGGH GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++
Sbjct: 242 PGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRA 301
Query: 437 LRAPNKRVIRATRKLNPLTNKQGDAETQSLRGRAEEESYLRAAQKEEL 294
LRAP K++ R K NPL N + + + LR A+ +L
Sbjct: 302 LRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 31.5 bits (68), Expect = 4.1
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -3
Query: 409 VLHAN*TRSLTNKAMLKLNPYAAVLKRKAILELRRRKNLKA-LADAEKSGLKLSKRNPAM 233
VL N ++L + MLKLNPYA ++R IL R L+ A A + L+ A
Sbjct: 313 VLKKNPLKNL--RIMLKLNPYAKTMRRNTILRQARNHKLRVDKAAAAAAALQAKSDEKAA 370
Query: 232 KAEK 221
A K
Sbjct: 371 VAGK 374
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 107 bits (258), Expect = 4e-23
Identities = 50/108 (46%), Positives = 68/108 (62%)
Frame = -2
Query: 617 PGGHXGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKV 438
PGGH GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++
Sbjct: 242 PGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRA 301
Query: 437 LRAPNKRVIRATRKLNPLTNKQGDAETQSLRGRAEEESYLRAAQKEEL 294
LRAP K++ R K NPL N + + + LR A+ +L
Sbjct: 302 LRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 31.5 bits (68), Expect = 4.1
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -3
Query: 409 VLHAN*TRSLTNKAMLKLNPYAAVLKRKAILELRRRKNLKA-LADAEKSGLKLSKRNPAM 233
VL N ++L + MLKLNPYA ++R IL R L+ A A + L+ A
Sbjct: 313 VLKKNPLKNL--RIMLKLNPYAKTMRRNTILRQARNHKLRVDKAAAAAAALQAKSDEKAA 370
Query: 232 KAEK 221
A K
Sbjct: 371 VAGK 374
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 107 bits (258), Expect = 4e-23
Identities = 50/108 (46%), Positives = 68/108 (62%)
Frame = -2
Query: 617 PGGHXGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKV 438
PGGH GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++
Sbjct: 242 PGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRA 301
Query: 437 LRAPNKRVIRATRKLNPLTNKQGDAETQSLRGRAEEESYLRAAQKEEL 294
LRAP K++ R K NPL N + + + LR A+ +L
Sbjct: 302 LRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 31.5 bits (68), Expect = 4.1
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -3
Query: 409 VLHAN*TRSLTNKAMLKLNPYAAVLKRKAILELRRRKNLKA-LADAEKSGLKLSKRNPAM 233
VL N ++L + MLKLNPYA ++R IL R L+ A A + L+ A
Sbjct: 313 VLKKNPLKNL--RIMLKLNPYAKTMRRNTILRQARNHKLRVDKAAAAAAALQAKSDEKAA 370
Query: 232 KAEK 221
A K
Sbjct: 371 VAGK 374
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 107 bits (258), Expect = 4e-23
Identities = 50/108 (46%), Positives = 68/108 (62%)
Frame = -2
Query: 617 PGGHXGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKV 438
PGGH GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++
Sbjct: 242 PGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRA 301
Query: 437 LRAPNKRVIRATRKLNPLTNKQGDAETQSLRGRAEEESYLRAAQKEEL 294
LRAP K++ R K NPL N + + + LR A+ +L
Sbjct: 302 LRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 31.5 bits (68), Expect = 4.1
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -3
Query: 409 VLHAN*TRSLTNKAMLKLNPYAAVLKRKAILELRRRKNLKA-LADAEKSGLKLSKRNPAM 233
VL N ++L + MLKLNPYA ++R IL R L+ A A + L+ A
Sbjct: 313 VLKKNPLKNL--RIMLKLNPYAKTMRRNTILRQARNHKLRVDKAAAAAAALQAKSDEKAA 370
Query: 232 KAEK 221
A K
Sbjct: 371 VAGK 374
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 107 bits (258), Expect = 4e-23
Identities = 50/108 (46%), Positives = 68/108 (62%)
Frame = -2
Query: 617 PGGHXGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKV 438
PGGH GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++
Sbjct: 242 PGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRA 301
Query: 437 LRAPNKRVIRATRKLNPLTNKQGDAETQSLRGRAEEESYLRAAQKEEL 294
LRAP K++ R K NPL N + + + LR A+ +L
Sbjct: 302 LRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 31.5 bits (68), Expect = 4.1
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -3
Query: 409 VLHAN*TRSLTNKAMLKLNPYAAVLKRKAILELRRRKNLKA-LADAEKSGLKLSKRNPAM 233
VL N ++L + MLKLNPYA ++R IL R L+ A A + L+ A
Sbjct: 313 VLKKNPLKNL--RIMLKLNPYAKTMRRNTILRQARNHKLRVDKAAAAAAALQAKSDEKAA 370
Query: 232 KAEK 221
A K
Sbjct: 371 VAGK 374
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 107 bits (256), Expect = 7e-23
Identities = 46/80 (57%), Positives = 59/80 (73%)
Frame = -2
Query: 617 PGGHXGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKV 438
PGGH GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++
Sbjct: 256 PGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRA 315
Query: 437 LRAPNKRVIRATRKLNPLTN 378
LRAP K++ R K NPL N
Sbjct: 316 LRAPRKKIHRRVLKKNPLKN 335
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 103 bits (248), Expect = 6e-22
Identities = 48/108 (44%), Positives = 67/108 (62%)
Frame = -2
Query: 617 PGGHXGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKV 438
PGGH GRF IW +SAF +LD L+G+W+ + K N+NLP +M NTDL+R+LKS EI++
Sbjct: 242 PGGHVGRFCIWIESAFRKLDELYGTWRKAASLKSNYNLPMHEMINTDLSRILKSPEIQRA 301
Query: 437 LRAPNKRVIRATRKLNPLTNKQGDAETQSLRGRAEEESYLRAAQKEEL 294
LRAP K++ R K NPL N + + + LR A+ +L
Sbjct: 302 LRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 31.1 bits (67), Expect = 5.4
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = -3
Query: 409 VLHAN*TRSLTNKAMLKLNPYAAVLKRKAILELRRRKNLK 290
VL N ++L + MLKLNPYA ++R IL R L+
Sbjct: 313 VLKKNPLKNL--RIMLKLNPYAKTMRRNTILRQARNHKLR 350
>AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens
cDNA FLJ43045 fis, clone BRTHA3003490. ).
Length = 1253
Score = 34.3 bits (75), Expect = 0.58
Identities = 26/93 (27%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Frame = -2
Query: 560 DPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP-NKRV-IRATRKLNP 387
DPL P ++K + L + ++AN + RL+KSD+++ +P N V I ++
Sbjct: 26 DPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSDQLKTSSSSPANSDVEIDGIGRIAM 85
Query: 386 LTNKQGDAETQSLRGR---AEEESYLRAAQKEE 297
+T + DAE++ + R ++ES L+ ++E
Sbjct: 86 VTKQVTDAESKLKKHRILLMKDESVLKNLVQQE 118
>AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein.
Length = 1919
Score = 34.3 bits (75), Expect = 0.58
Identities = 26/93 (27%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Frame = -2
Query: 560 DPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP-NKRV-IRATRKLNP 387
DPL P ++K + L + ++AN + RL+KSD+++ +P N V I ++
Sbjct: 771 DPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSDQLKTSSSSPANSDVEIDGIGRIAM 830
Query: 386 LTNKQGDAETQSLRGR---AEEESYLRAAQKEE 297
+T + DAE++ + R ++ES L+ ++E
Sbjct: 831 VTKQVTDAESKLKKHRILLMKDESVLKNLVQQE 863
>AF349752-1|AAL83912.1| 1013|Homo sapiens amplified in breast cancer
1 protein.
Length = 1013
Score = 30.7 bits (66), Expect = 7.1
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -3
Query: 583 LSPHSAGLTPYSGHGRHHQNKRRTSTCPNRRWPTLTSHVFSSLMRSG 443
+ PH A L G G Q K ++T P++R P L +F ++M +G
Sbjct: 560 IQPHGAKLLEELGTGLIQQYKPDSTTAPDQRAPVLLVVMFWTMMLNG 606
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,021,700
Number of Sequences: 237096
Number of extensions: 1429173
Number of successful extensions: 3334
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3334
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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