Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_A22
         (809 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY145132-1|AAN61516.1| 2517|Homo sapiens p53-associated parkin-l...    32   2.8  
AL133375-1|CAI20204.1| 2518|Homo sapiens RP3-330M21.2 protein.         32   2.8  
AJ318215-1|CAC85756.1| 2517|Homo sapiens putative E3 ubiquitin l...    32   2.8  
AB014608-1|BAA31683.3| 1753|Homo sapiens KIAA0708 protein.             32   2.8  
U80458-1|AAD00355.1| 1604|Homo sapiens microtubule associated pr...    31   3.7  
U38292-1|AAB41133.1| 2805|Homo sapiens microtubule-associated pr...    31   3.7  
U38291-1|AAB41132.1| 2805|Homo sapiens microtubule-associated pr...    31   3.7  
AF200415-1|AAF08305.2| 1825|Homo sapiens proliferation-related p...    31   3.7  

>AY145132-1|AAN61516.1| 2517|Homo sapiens p53-associated parkin-like
            cytoplasmic protein protein.
          Length = 2517

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 19/54 (35%), Positives = 29/54 (53%)
 Frame = +1

Query: 628  LKRMYSKCCGDRNRSPLASRGNNTETNARRSGLRRSHISTRFTRHTDQQLYGYL 789
            L+R  S+  G R    LA R   +    ++S L  +H+S +F R+ DQQ+ G L
Sbjct: 1508 LQRAGSELFGPRAAFMLALRSGFSGALLQQSFLTAAHMSEQFARYIDQQIQGGL 1561


>AL133375-1|CAI20204.1| 2518|Homo sapiens RP3-330M21.2 protein.
          Length = 2518

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 19/54 (35%), Positives = 29/54 (53%)
 Frame = +1

Query: 628  LKRMYSKCCGDRNRSPLASRGNNTETNARRSGLRRSHISTRFTRHTDQQLYGYL 789
            L+R  S+  G R    LA R   +    ++S L  +H+S +F R+ DQQ+ G L
Sbjct: 1508 LQRAGSELFGPRAAFMLALRSGFSGALLQQSFLTAAHMSEQFARYIDQQIQGGL 1561


>AJ318215-1|CAC85756.1| 2517|Homo sapiens putative E3 ubiquitin ligase
            protein.
          Length = 2517

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 19/54 (35%), Positives = 29/54 (53%)
 Frame = +1

Query: 628  LKRMYSKCCGDRNRSPLASRGNNTETNARRSGLRRSHISTRFTRHTDQQLYGYL 789
            L+R  S+  G R    LA R   +    ++S L  +H+S +F R+ DQQ+ G L
Sbjct: 1508 LQRAGSELFGPRAAFMLALRSGFSGALLQQSFLTAAHMSEQFARYIDQQIQGGL 1561


>AB014608-1|BAA31683.3| 1753|Homo sapiens KIAA0708 protein.
          Length = 1753

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 19/54 (35%), Positives = 29/54 (53%)
 Frame = +1

Query: 628 LKRMYSKCCGDRNRSPLASRGNNTETNARRSGLRRSHISTRFTRHTDQQLYGYL 789
           L+R  S+  G R    LA R   +    ++S L  +H+S +F R+ DQQ+ G L
Sbjct: 744 LQRAGSELFGPRAAFMLALRSGFSGALLQQSFLTAAHMSEQFARYIDQQIQGGL 797


>U80458-1|AAD00355.1| 1604|Homo sapiens microtubule associated protein
            1A protein.
          Length = 1604

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
 Frame = -3

Query: 462  TVEVGRAVVPTRA-DSQEVLPPVD--VRGCTKETLPSRDSAILFQIGQHAIP 316
            T+E    V P R+  +QE    +D  + GCT + LP++D AI+F+I +   P
Sbjct: 980  TLEKEEKVPPPRSPQAQEAPVNIDEGLTGCTIQLLPAQDKAIVFEIMEAGEP 1031


>U38292-1|AAB41133.1| 2805|Homo sapiens microtubule-associated protein
            1a protein.
          Length = 2805

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
 Frame = -3

Query: 462  TVEVGRAVVPTRA-DSQEVLPPVD--VRGCTKETLPSRDSAILFQIGQHAIP 316
            T+E    V P R+  +QE    +D  + GCT + LP++D AI+F+I +   P
Sbjct: 1057 TLEKEEKVPPPRSPQAQEAPVNIDEGLTGCTIQLLPAQDKAIVFEIMEAGEP 1108


>U38291-1|AAB41132.1| 2805|Homo sapiens microtubule-associated protein
            1a protein.
          Length = 2805

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
 Frame = -3

Query: 462  TVEVGRAVVPTRA-DSQEVLPPVD--VRGCTKETLPSRDSAILFQIGQHAIP 316
            T+E    V P R+  +QE    +D  + GCT + LP++D AI+F+I +   P
Sbjct: 1057 TLEKEEKVPPPRSPQAQEAPVNIDEGLTGCTIQLLPAQDKAIVFEIMEAGEP 1108


>AF200415-1|AAF08305.2| 1825|Homo sapiens proliferation-related
            protein P80 protein.
          Length = 1825

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
 Frame = -3

Query: 462  TVEVGRAVVPTRA-DSQEVLPPVD--VRGCTKETLPSRDSAILFQIGQHAIP 316
            T+E    V P R+  +QE    +D  + GCT + LP++D AI+F+I +   P
Sbjct: 1057 TLEKEEKVPPPRSPQAQEAPVNIDEGLTGCTIQLLPAQDKAIVFEIMEAGEP 1108


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,335,705
Number of Sequences: 237096
Number of extensions: 2814140
Number of successful extensions: 6077
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6068
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10036353240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)