Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_A21
         (812 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93387-2|CAB07650.1|  763|Caenorhabditis elegans Hypothetical pr...    28   9.1  
Z70680-3|CAA94575.1| 1263|Caenorhabditis elegans Hypothetical pr...    28   9.1  
U43562-1|AAC47411.1| 1263|Caenorhabditis elegans DPY-26 protein.       28   9.1  
AF000265-12|ABQ13076.1|  302|Caenorhabditis elegans Hypothetical...    28   9.1  
AF000265-11|AAK68199.1|  298|Caenorhabditis elegans Hypothetical...    28   9.1  

>Z93387-2|CAB07650.1|  763|Caenorhabditis elegans Hypothetical
           protein T02E9.3 protein.
          Length = 763

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
 Frame = -1

Query: 443 FGHLVHALGRAAGGAKLPSAGLCLNASKAEASLAESGEDMLTVEPRESGGSKQCDFTSRV 264
           FG L H  G       LP   +    S+  + ++++G    +   R+SGGSK+   +   
Sbjct: 212 FGQLTHRGGERERRHSLPRVIIEEVRSRRGSRMSQTGSQSGSPTRRQSGGSKERSPSQPD 271

Query: 263 SH--SKRETRRRSP 228
            H  +K + R RSP
Sbjct: 272 IHIVAKPQQRWRSP 285


>Z70680-3|CAA94575.1| 1263|Caenorhabditis elegans Hypothetical protein
            C25G4.5 protein.
          Length = 1263

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 23/78 (29%), Positives = 30/78 (38%)
 Frame = +1

Query: 100  RQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSIDLRDPNGLRRRVSRFECETRLVK 279
            R   KS+ D +E        PD ++ D R   +  +      N   R+V    C T L  
Sbjct: 1076 RSPNKSNHDVNETMKALTEMPDYQAADERPNNQPTTSTYGTANTENRKVHINGCHTLL-- 1133

Query: 280  SHCLEPPDSRGSTVSISS 333
            S  L  P   G TV  SS
Sbjct: 1134 SLALSMPSRMGETVRPSS 1151


>U43562-1|AAC47411.1| 1263|Caenorhabditis elegans DPY-26 protein.
          Length = 1263

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 23/78 (29%), Positives = 30/78 (38%)
 Frame = +1

Query: 100  RQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSIDLRDPNGLRRRVSRFECETRLVK 279
            R   KS+ D +E        PD ++ D R   +  +      N   R+V    C T L  
Sbjct: 1076 RSPNKSNHDVNETMKALTEMPDYQAADERPNNQPTTSTYGTANTENRKVHINGCHTLL-- 1133

Query: 280  SHCLEPPDSRGSTVSISS 333
            S  L  P   G TV  SS
Sbjct: 1134 SLALSMPSRMGETVRPSS 1151


>AF000265-12|ABQ13076.1|  302|Caenorhabditis elegans Hypothetical
           protein C18E3.9b protein.
          Length = 302

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +1

Query: 16  LSSSDESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRH 144
           ++ S +SPGA  S ++   D + PSTT R+   S  D +  +H
Sbjct: 139 ITDSSQSPGASPSSDQIFIDDSQPSTTKRRWVISEPDDNSDKH 181


>AF000265-11|AAK68199.1|  298|Caenorhabditis elegans Hypothetical
           protein C18E3.9a protein.
          Length = 298

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +1

Query: 16  LSSSDESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRH 144
           ++ S +SPGA  S ++   D + PSTT R+   S  D +  +H
Sbjct: 139 ITDSSQSPGASPSSDQIFIDDSQPSTTKRRWVISEPDDNSDKH 181


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,598,763
Number of Sequences: 27780
Number of extensions: 393503
Number of successful extensions: 1145
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1145
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)