Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_A19
         (773 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0643 - 10090720-10091007,10091121-10091228,10091314-100914...    67   1e-11
06_01_1075 - 8770120-8770371,8770684-8770770,8770866-8770946,877...    48   8e-06
07_03_0812 - 21694348-21694632,21695392-21695574,21696366-21697526     30   2.3  

>03_02_0643 -
           10090720-10091007,10091121-10091228,10091314-10091400,
           10091488-10091568,10091669-10091803,10091919-10092140,
           10092377-10092457,10092565-10092726,10092851-10093041,
           10093190-10093331,10093449-10093547,10093668-10093806,
           10094355-10094392
          Length = 590

 Score = 67.3 bits (157), Expect = 1e-11
 Identities = 49/151 (32%), Positives = 73/151 (48%), Gaps = 8/151 (5%)
 Frame = -2

Query: 571 DCEQIERX-SAFSLELRVPFLDIXFTHHYLSIPP--KLRQPQNG-VEKHLLRSSF--AKS 410
           DC +  +  SA+ LE+RVPFLD  F +  +S+ P  K+     G +EK ++R +F   + 
Sbjct: 366 DCLRANKATSAWGLEVRVPFLDKEFINVAMSMDPEWKMYNADLGRIEKWVMRKAFDDEEH 425

Query: 409 GLLPDCVLWRHKEAFSDGXXXXXXXXXXXXKE--ITTERLXEDDIXYPGLQPKTNESXYY 236
             LP  +L+R KE FSDG             E  ++ E +      YP   P   E+ YY
Sbjct: 426 PYLPKHILYRQKEQFSDGVGYNWIDGLKAFTEQQVSDEMMKNAAKVYPHNTPVNKEAYYY 485

Query: 235 RYVFEKSFPGQHNFTPYYWMPKWVQVSDPSA 143
           R +FE+ FP +       W P  +  S P+A
Sbjct: 486 RMIFERLFPQESARETVPWGPS-IACSTPAA 515



 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -1

Query: 662 GYIYFXRRPV*KXTXHKESVRXXXDXYXYDGLRADR 555
           GY+YF   P  K   HKE+ R     + YD LRA++
Sbjct: 338 GYLYFHFAPN-KEEFHKETCRKVKALHQYDCLRANK 372


>06_01_1075 -
           8770120-8770371,8770684-8770770,8770866-8770946,
           8771043-8771177,8771363-8771584,8771676-8771756,
           8771954-8772115,8772991-8773106,8774333-8774474,
           8774592-8774687,8774987-8775125,8776297-8776376
          Length = 530

 Score = 48.0 bits (109), Expect = 8e-06
 Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
 Frame = -2

Query: 577 MMDCEQIERX-SAFSLELRVPFLDIXFTHHYLSIPPK---LRQPQNGVEKHLLRSSF--A 416
           + DC +  +  SA+ +E RVPFLD  F +  + I P+   +++    +EK +LR++F   
Sbjct: 352 LYDCLRANKSTSAWGVEARVPFLDKNFINVAMDIDPEWKMIKRDLGRIEKWVLRNAFDDE 411

Query: 415 KSGLLPDCVLWRHKEAFSDG 356
           +   LP  +L+R KE FSDG
Sbjct: 412 EKPYLPKHILYRQKEQFSDG 431



 Score = 29.9 bits (64), Expect = 2.3
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -1

Query: 662 GYIYFXRRPV*KXTXHKESVRXXXDXYXYDGLRADRT 552
           GY+YF + P  K   H+E+ R     + YD LRA+++
Sbjct: 326 GYLYFHKAPN-KKEFHEETCRKIKALHLYDCLRANKS 361


>07_03_0812 - 21694348-21694632,21695392-21695574,21696366-21697526
          Length = 542

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = +2

Query: 50  IYFYYHPKITLTLIIW*VYELSFGRIMFNKPCRRV*NLNPFXHPIV 187
           +YF   P++  TL+   VY     R++FN+ C+ + NL P  + +V
Sbjct: 336 VYFNRMPRLR-TLVPPAVYPYGLQRVLFNRSCQMLLNLCPSIYRVV 380


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,517,048
Number of Sequences: 37544
Number of extensions: 241792
Number of successful extensions: 458
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 457
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2068401984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)