Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_A19
         (773 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3472|AAS65085.1|  558|Drosophila melanogaster CG33486-P...    83   5e-16

>AE014296-3472|AAS65085.1|  558|Drosophila melanogaster CG33486-PA
           protein.
          Length = 558

 Score = 82.6 bits (195), Expect = 5e-16
 Identities = 55/162 (33%), Positives = 80/162 (49%), Gaps = 16/162 (9%)
 Frame = -2

Query: 577 MMDCEQIERXS-AFSLELRVPFLDIXFTHHYLSIPPKLRQP----------QNGVEKHLL 431
           + DC +  + + A  +ELRVPFLD  F +H + I P+ + P          Q  +EK++L
Sbjct: 388 LSDCLRANKVAMAKGVELRVPFLDTGFVNHVMQIRPEDKIPGPLNKFGEVQQKRLEKYVL 447

Query: 430 RSSFAKSGLLPDCVLWRHKEAFSD--GXXXXXXXXXXXXKEITTERLXEDDIXYPGLQPK 257
           R++FA    LPD VLWR KE FSD  G              ++ +      + +P   P 
Sbjct: 448 RAAFA-DNYLPDEVLWRQKEQFSDGVGYDWIDSIRRVATSHVSDQEFSAAALRFPFNTPT 506

Query: 256 TNESXYYRYVFEKSFPGQHNF-TPYYWMPK--WVQVSDPSAR 140
           T E+ YYR +F + FPG+    T   W+P+  W    DPS R
Sbjct: 507 TKEAFYYRCIFAEQFPGESAARTVVRWVPRLDWGCPEDPSGR 548


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,642,044
Number of Sequences: 53049
Number of extensions: 429510
Number of successful extensions: 871
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)