Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_A17
         (851 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0483 + 3633010-3633203,3633652-3633957,3634598-3634821,363...    29   4.7  
03_01_0225 + 1784211-1784324,1784398-1784668,1784992-1785248,178...    29   4.7  
03_06_0092 + 31589665-31589807,31590111-31590243,31590316-31590546     28   8.2  

>07_01_0483 +
           3633010-3633203,3633652-3633957,3634598-3634821,
           3635722-3635825,3636528-3636662,3637537-3637705,
           3638074-3638209,3639200-3639338,3640487-3640663,
           3640874-3641041,3641363-3641458,3642217-3642345,
           3642439-3642669
          Length = 735

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +1

Query: 382 LLRYGSANSLLQAATARHIASNLKDIISEGINDAI 486
           L  YG  +  L+  TA H    LKDI+S G  D I
Sbjct: 47  LTGYGCEDHFLEQDTAAHAWECLKDILSGGYTDGI 81


>03_01_0225 +
           1784211-1784324,1784398-1784668,1784992-1785248,
           1785338-1785450,1791599-1791746,1791943-1792080,
           1792448-1792525
          Length = 372

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 192 FTIQIHKHLMLAGTRWPGASWCGH 263
           F I + KHL   G +  GA WC H
Sbjct: 272 FAIALAKHLHSVGAKMYGAFWCSH 295


>03_06_0092 + 31589665-31589807,31590111-31590243,31590316-31590546
          Length = 168

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -2

Query: 214 CL*ICIVNLKNLSDCTLPMLRVYSLLI-LPRRPPG 113
           C  + I+ L     CTL M+ VYS+L+  P R PG
Sbjct: 48  CFLVTIMGLVIPWSCTLAMIDVYSILVGCPLRVPG 82


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,983,149
Number of Sequences: 37544
Number of extensions: 262298
Number of successful extensions: 700
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 700
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)