Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_A17
         (851 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    26   0.51 
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    26   0.51 
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    26   0.51 
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    24   1.5  

>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 25.8 bits (54), Expect = 0.51
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 237 WPGASWCGHGGTAA 278
           +PG  WCGHG  ++
Sbjct: 31  YPGTLWCGHGNKSS 44


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 25.8 bits (54), Expect = 0.51
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 237 WPGASWCGHGGTAA 278
           +PG  WCGHG  ++
Sbjct: 36  YPGTLWCGHGNKSS 49


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 25.8 bits (54), Expect = 0.51
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 237 WPGASWCGHGGTAA 278
           +PG  WCGHG  ++
Sbjct: 36  YPGTLWCGHGNKSS 49


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 386 NKTMFCSFLLNNTNSSYVC 330
           N+  +C++ LN TNS + C
Sbjct: 7   NRPSYCTWELNATNSPHTC 25


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,411
Number of Sequences: 438
Number of extensions: 3122
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)