Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_A16
(816 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 36 0.046
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 32 0.43
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 32 0.56
U46675-2|AAB52644.1| 125|Caenorhabditis elegans Hypothetical pr... 31 1.3
AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucle... 30 2.3
AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila so... 30 2.3
U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z68227-18|CAA92521.1| 869|Caenorhabditis elegans Hypothetical p... 29 4.0
Z68220-11|CAA92493.1| 869|Caenorhabditis elegans Hypothetical p... 29 4.0
Z70718-5|CAA94670.1| 197|Caenorhabditis elegans Hypothetical pr... 28 9.2
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 9.2
U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical p... 28 9.2
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 35.5 bits (78), Expect = 0.046
Identities = 22/94 (23%), Positives = 30/94 (31%)
Frame = -1
Query: 732 PYPVHXPKPVXTPSRSPSHTPVENQXPTPVKVHVDRXXXXXXXXXXXXXXXXXXXXXXXX 553
P P H PKP P P P+ P P + +
Sbjct: 114 PMPKHKPKPFPKPMLFPKPMPIPKPMPFPKPMLFPKPMPFPKPMPKSKPKSEPFPNPMPF 173
Query: 552 EKHIPYPVEKAVPFPVNIPVDRPYPVHIEKHVPV 451
K +P P K P P + P P P+ K +P+
Sbjct: 174 PKPMPKPKPKPKPMPKHKPKPFPKPMLFPKPMPI 207
Score = 32.3 bits (70), Expect = 0.43
Identities = 22/95 (23%), Positives = 31/95 (32%), Gaps = 2/95 (2%)
Frame = -1
Query: 732 PYPVHXPKPVXTPSRSPSHTPVENQXPT--PVKVHVDRXXXXXXXXXXXXXXXXXXXXXX 559
P+P PKP P P H P P P + + +
Sbjct: 172 PFPKPMPKPKPKPKPMPKHKPKPFPKPMLFPKPMPIPKPMPFPKPMPKPMPKHKPKPFPK 231
Query: 558 XXEKHIPYPVEKAVPFPVNIPVDRPYPVHIEKHVP 454
P P+ K +PFP +P +P P + K P
Sbjct: 232 PMLFPKPMPIPKPMPFPKPMPKPKPKPKPMPKPKP 266
Score = 31.9 bits (69), Expect = 0.56
Identities = 24/93 (25%), Positives = 29/93 (31%)
Frame = -1
Query: 732 PYPVHXPKPVXTPSRSPSHTPVENQXPTPVKVHVDRXXXXXXXXXXXXXXXXXXXXXXXX 553
P P H PKP P P P P P + +
Sbjct: 50 PMPKHKPKPFPKPMLFPKPMPKHKPKPFPKPMLFPKPMPFPKPMPKSKPKSEPFPNPMPF 109
Query: 552 EKHIPYPVEKAVPFPVNIPVDRPYPVHIEKHVP 454
K P P K PFP P+ P P+ I K +P
Sbjct: 110 PKPKPMPKHKPKPFPK--PMLFPKPMPIPKPMP 140
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/93 (22%), Positives = 27/93 (29%)
Frame = -1
Query: 732 PYPVHXPKPVXTPSRSPSHTPVENQXPTPVKVHVDRXXXXXXXXXXXXXXXXXXXXXXXX 553
P P P P P P P + P P + +
Sbjct: 10 PKPKSEPFPKPMPKSKPKSEPFPSPMPFPKPMPKPKPKPKPMPKHKPKPFPKPMLFPKPM 69
Query: 552 EKHIPYPVEKAVPFPVNIPVDRPYPVHIEKHVP 454
KH P P K + FP +P +P P K P
Sbjct: 70 PKHKPKPFPKPMLFPKPMPFPKPMPKSKPKSEP 102
Score = 30.7 bits (66), Expect = 1.3
Identities = 25/100 (25%), Positives = 34/100 (34%), Gaps = 2/100 (2%)
Frame = -1
Query: 732 PYPVHXPKPVXTPSRSPSHTPVENQXPTPVKVHVDRXXXXXXXXXXXXXXXXXXXXXXXX 553
P P+ PKP+ P P P P P+ +
Sbjct: 130 PKPMPIPKPMPFPK--PMLFPKPMPFPKPMPKSKPKSEPFPNPMPFPKPMPKPKPKPKPM 187
Query: 552 EKHIPYPVEKAV--PFPVNIPVDRPYPVHIEKHVPVHIEK 439
KH P P K + P P+ IP P+P + K +P H K
Sbjct: 188 PKHKPKPFPKPMLFPKPMPIPKPMPFPKPMPKPMPKHKPK 227
Score = 28.7 bits (61), Expect = 5.3
Identities = 23/104 (22%), Positives = 31/104 (29%), Gaps = 2/104 (1%)
Frame = -1
Query: 756 PSKGXCDXPYPVHXPKPVXTPSRSPSHTPVENQXPTPVKVHVDRXXXXXXXXXXXXXXXX 577
PS P P PKP P P P P P+ H +
Sbjct: 32 PSPMPFPKPMPKPKPKPKPMPKHKPKPFPKPMLFPKPMPKHKPKPFPKPMLFPKPMPFPK 91
Query: 576 XXXXXXXXEKHIPYPV--EKAVPFPVNIPVDRPYPVHIEKHVPV 451
+ P P+ K P P + P P P+ K +P+
Sbjct: 92 PMPKSKPKSEPFPNPMPFPKPKPMPKHKPKPFPKPMLFPKPMPI 135
Score = 28.3 bits (60), Expect = 7.0
Identities = 22/102 (21%), Positives = 31/102 (30%)
Frame = -1
Query: 759 VPSKGXCDXPYPVHXPKPVXTPSRSPSHTPVENQXPTPVKVHVDRXXXXXXXXXXXXXXX 580
+P P+P P P P P P+ P P +
Sbjct: 21 MPKSKPKSEPFPSPMPFPKPMPKPKPKPKPMPKHKPKPFPKPMLFPKPMPKHKPKPFPKP 80
Query: 579 XXXXXXXXXEKHIPYPVEKAVPFPVNIPVDRPYPVHIEKHVP 454
K +P K+ PFP +P +P P + KH P
Sbjct: 81 MLFPKPMPFPKPMPKSKPKSEPFPNPMPFPKPKP--MPKHKP 120
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 32.3 bits (70), Expect = 0.43
Identities = 24/63 (38%), Positives = 34/63 (53%)
Frame = -2
Query: 614 SMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSP 435
S SRS+ R+ R + + SRS SR++ P RS+ S S ++S SRS RSP
Sbjct: 212 SRSRSRSRSRDRRRSRSRSSSRSKSRSR-SPPKRSRRESKSKSRSRSRSRSADNRKSRSP 270
Query: 434 YRT 426
R+
Sbjct: 271 SRS 273
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 31.9 bits (69), Expect = 0.56
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 549 KHIPYPVEKAVPFPVNIPVDRPYPVHI 469
+H+P PV VP P+ +PV P P +
Sbjct: 154 QHVPVPVPVQVPVPIRVPVPVPVPTPV 180
>U46675-2|AAB52644.1| 125|Caenorhabditis elegans Hypothetical
protein F35A5.5 protein.
Length = 125
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 543 IPYPVEKAVPFPVNIPVDRPYPVHIEKHVPV 451
+P PV + VP P+ +P+ P P+ + VPV
Sbjct: 15 VPAPVPQPVPVPMPMPMPMPMPMPVPVPVPV 45
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 540 PYPVEKAVPFPVNIPVDRPYPVHIEKHVPVHI 445
P PV VP PV +P+ P P+ + VPV +
Sbjct: 12 PVPVPAPVPQPVPVPMPMPMPMPMPMPVPVPV 43
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = -1
Query: 765 VQVPSKGXCDXPYPVHXPKPVXTPSRSPSHTPVENQXPTPVK 640
+ +P P PV P PV P P P+ P PV+
Sbjct: 5 IPIPIPAPVPVPAPVPQPVPVPMPMPMPMPMPMPVPVPVPVQ 46
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -1
Query: 543 IPYPVEKAVPFPVNIPVDRPYPVHIEKHVPVHI 445
IP PV P P +PV P P+ + +PV +
Sbjct: 9 IPAPVPVPAPVPQPVPVPMPMPMPMPMPMPVPV 41
>AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucleotide
exchange factorfor RAS protein.
Length = 1413
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/65 (35%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
Frame = -2
Query: 650 PPLKYTLTAQCPSMSRSQFRTPSRYQC---PPLTPSRSTSRTQ*KRPCRSQLTSPSTGHT 480
P K LT + S S F+ P Y+ PPL P STS P S TS +T
Sbjct: 1344 PLAKSPLTPSRDNSSPSAFQFPVVYEASTAPPLPPRPSTSSDVSSSPSTSGSTSSATKEN 1403
Query: 479 QSTSR 465
Q R
Sbjct: 1404 QEQLR 1408
>AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila sos
homolog protein 1 protein.
Length = 1493
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/65 (35%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
Frame = -2
Query: 650 PPLKYTLTAQCPSMSRSQFRTPSRYQC---PPLTPSRSTSRTQ*KRPCRSQLTSPSTGHT 480
P K LT + S S F+ P Y+ PPL P STS P S TS +T
Sbjct: 1344 PLAKSPLTPSRDNSSPSAFQFPVVYEASTAPPLPPRPSTSSDVSSSPSTSGSTSSATKEN 1403
Query: 479 QSTSR 465
Q R
Sbjct: 1404 QEQLR 1408
>U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical
protein C34E10.8 protein.
Length = 1024
Score = 29.5 bits (63), Expect = 3.0
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -2
Query: 587 PSRY-QCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYR 429
PSR+ Q PLTPS STS +Q P + SP G + T RS +P+R
Sbjct: 577 PSRHAQHSPLTPSTSTSSSQLLAPPK----SPQPGTSSQTFRSQASRLPIAPHR 626
>Z68227-18|CAA92521.1| 869|Caenorhabditis elegans Hypothetical
protein F49C12.15 protein.
Length = 869
Score = 29.1 bits (62), Expect = 4.0
Identities = 25/82 (30%), Positives = 42/82 (51%)
Frame = -2
Query: 656 ALPPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQ 477
A+ + T +++ S SRS+ R+ Q L +RS S + +R ++ SPS+ ++
Sbjct: 76 AIRSAQSTASSRSRSRSRSRSRSTMNQQIR-LARTRSASGGKLRRSRSARRRSPSSSASR 134
Query: 476 STSRSTCLCTLRSPYRTQLRYR 411
S SRST +S +RYR
Sbjct: 135 SRSRSTSRTRAQS---IPIRYR 153
>Z68220-11|CAA92493.1| 869|Caenorhabditis elegans Hypothetical
protein F49C12.15 protein.
Length = 869
Score = 29.1 bits (62), Expect = 4.0
Identities = 25/82 (30%), Positives = 42/82 (51%)
Frame = -2
Query: 656 ALPPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQ 477
A+ + T +++ S SRS+ R+ Q L +RS S + +R ++ SPS+ ++
Sbjct: 76 AIRSAQSTASSRSRSRSRSRSRSTMNQQIR-LARTRSASGGKLRRSRSARRRSPSSSASR 134
Query: 476 STSRSTCLCTLRSPYRTQLRYR 411
S SRST +S +RYR
Sbjct: 135 SRSRSTSRTRAQS---IPIRYR 153
>Z70718-5|CAA94670.1| 197|Caenorhabditis elegans Hypothetical
protein C04G2.8 protein.
Length = 197
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = -2
Query: 608 SRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 459
SRS+ R+ SR + + SRS SR +R R + + + G ST++ T
Sbjct: 126 SRSRSRSRSRSRSRSYSRSRSGSRRSSRRRSRRRSSLKARGRRASTAKKT 175
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = -1
Query: 780 PXYXXVQVPSKGXCDXPYPVHXPKPVXTPSRSPSHTP 670
P Y PS+ P P+ PV PS S TP
Sbjct: 850 PRYGTPAPPSRASAPTPQPLSSTMPVVAPSTSTQPTP 886
>U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical
protein B0507.1 protein.
Length = 615
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -2
Query: 569 PPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLR 441
PP+ +R+ + + +RP R Q+ SP +G + + C+C R
Sbjct: 187 PPVVVTRAPAIIENERPWRGQVCSPQSG---CSGGAACICGAR 226
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,896,324
Number of Sequences: 27780
Number of extensions: 222038
Number of successful extensions: 1245
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1135
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -