Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_A15
(848 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 318 6e-88
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 315 6e-87
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 126 4e-30
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 66 8e-12
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 38 0.002
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 33 0.051
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 1.1
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 28 1.5
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 28 1.5
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 28 1.5
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 28 1.5
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||... 26 5.9
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 5.9
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 26 7.8
SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr 1||... 26 7.8
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 318 bits (781), Expect = 6e-88
Identities = 140/181 (77%), Positives = 161/181 (88%), Gaps = 1/181 (0%)
Frame = -3
Query: 675 ILSYP-YHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 499
++ YP HFPLVTY+P++SA KA+HE SV EITN CFEP NQMVKCDPR G+YMA C+L
Sbjct: 263 LVPYPRIHFPLVTYSPIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDPRTGRYMATCLL 322
Query: 498 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 319
YRGDV+P+DV AA+ +IK++RTIQFVDWCPTGFK+GI Y+PP VPG +AKV RAVCML
Sbjct: 323 YRGDVIPRDVQAAVTSIKSRRTIQFVDWCPTGFKIGICYEPPQHVPGSGIAKVNRAVCML 382
Query: 318 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 139
SNTT+IAEAW+RLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+DYEEVG D
Sbjct: 383 SNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEEVGQD 442
Query: 138 S 136
S
Sbjct: 443 S 443
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 315 bits (773), Expect = 6e-87
Identities = 140/181 (77%), Positives = 159/181 (87%), Gaps = 1/181 (0%)
Frame = -3
Query: 675 ILSYP-YHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 499
++ YP HFPLVTYAP++SA KA+HE SV EITN CFEP NQMVKCDPR G+YMA C+L
Sbjct: 259 LVPYPRIHFPLVTYAPIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDPRAGRYMATCLL 318
Query: 498 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 319
YRGDV+P+DV AA+ TIK KRTIQFVDWCPTGFK+GI +PP + G ++AKV RAVCML
Sbjct: 319 YRGDVIPRDVQAAVTTIKAKRTIQFVDWCPTGFKIGICDRPPQHIEGSEIAKVDRAVCML 378
Query: 318 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 139
SNTT+IAEAW+RLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+DYEEVG D
Sbjct: 379 SNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEEVGQD 438
Query: 138 S 136
S
Sbjct: 439 S 439
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 126 bits (304), Expect = 4e-30
Identities = 64/176 (36%), Positives = 101/176 (57%), Gaps = 3/176 (1%)
Frame = -3
Query: 657 HFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVP 478
HF +V +AP+ + + + +SV E+T F+ N MV DPRHG+Y+ L+RG V
Sbjct: 264 HFFMVGFAPLAAIGSSSFQAVSVPELTQQMFDANNMMVAADPRHGRYLTVAALFRGKVSM 323
Query: 477 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 298
K+V+ I +++TK + FV+W P + PP DL + + + N+T+I
Sbjct: 324 KEVDEQIRSVQTKNSAYFVEWIPDNVLKAVCSVPPK-----DL---KMSATFIGNSTSIQ 375
Query: 297 EAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAR---EDLAALEKDYEEVGMD 139
E + RL +F M+ ++AF+HWY GEGM+E EF+EA DL + + Y+E G+D
Sbjct: 376 EIFRRLGDQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAGID 431
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 65.7 bits (153), Expect = 8e-12
Identities = 44/175 (25%), Positives = 85/175 (48%), Gaps = 7/175 (4%)
Frame = -3
Query: 657 HFPLVTYAPVISA---EKAYHEQLSVAEITNACFEPANQMVKCDP-RHGKYMACCMLYRG 490
HF L +Y P + E + +V ++ P NQMV +P + +++ + +G
Sbjct: 267 HFLLTSYTPFTNQQVEEAKAIRKTTVLDVMRRLLLPKNQMVSVNPSKKSCFISILDIIQG 326
Query: 489 DVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 310
+ P DV+ ++ I+ +R F+ W P +V ++ + P + ++ + ML+N
Sbjct: 327 EADPADVHKSLLRIRERRYASFIPWGPASIQVALSKKSPYIKTNHRVSGL-----MLANH 381
Query: 309 TAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE---GEFSEAREDLAALEKDYE 154
T+IA + R ++D + + AF+ Y E + E EF +R+ +A L +YE
Sbjct: 382 TSIASLFKRTLDQYDRLRKRNAFLEQYKKEAIFEDDLNEFDSSRDVVADLINEYE 436
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 37.5 bits (83), Expect = 0.002
Identities = 34/128 (26%), Positives = 45/128 (35%), Gaps = 2/128 (1%)
Frame = -1
Query: 737 PXXPTXXXSXSLNARXLTTXQYCPTPITSHWSRTRQSSL--PRRPTMNSFPSPRSQTHAS 564
P PT S SLN + I+S + Q S+ P P + P
Sbjct: 471 PEKPTSGESLSLNPPPAMPKVFPERDISSASQKAAQPSVITPSVPQPPAAPVVPEAPSVH 530
Query: 563 SPPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVST 384
PP P + S VV P + RP++P P LS V PV+ V +
Sbjct: 531 QPPAA--PVAPEVPSAPQRPAAPVVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPS 588
Query: 383 TSHPPWCP 360
PP P
Sbjct: 589 VPQPPVAP 596
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 33.1 bits (72), Expect = 0.051
Identities = 31/108 (28%), Positives = 48/108 (44%)
Frame = -1
Query: 701 NARXLTTXQYCPTPITSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMA 522
N T+ Y TP+TS + T SS P T P + T+ ++ + +TPV +
Sbjct: 495 NCTTSTSVPYTSTPVTSS-NYTISSSTPVTST------PVTTTNCTTSTSVLYTSTPVTS 547
Query: 521 STWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTS 378
+ CT TS P T P S ++ S++ PV+ + TTS
Sbjct: 548 TPLATTNCTTSTSVPYTST-PVTSSNYTISSSTPVTSTPVTTTNCTTS 594
Score = 32.7 bits (71), Expect = 0.068
Identities = 37/130 (28%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
Frame = -1
Query: 737 PXXPTXXXSXSLNARXLTTXQYCPTPITSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSP 558
P PT S N+ L T T TS SSL T P+ S T P
Sbjct: 149 PIPPTSTSSTDTNSNPLPTTSTSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIPIP 208
Query: 557 PTRW*NATPVMAS--TWLAVCCTVVTSYP----RM*TRPSLPS-KPSVLSNSSTGVQPVS 399
PT ++T +S + CT TS P + P P+ P+ S++S + P S
Sbjct: 209 PTST-SSTDTNSSPLPTTSTSCTTSTSIPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTS 267
Query: 398 RSVSTTSHPP 369
S + T+ P
Sbjct: 268 TSSTDTNSSP 277
Score = 32.7 bits (71), Expect = 0.068
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 2/126 (1%)
Frame = -1
Query: 743 TKPXXPTXXXSXSLNARXLTTXQYCPTPITSHWSRTRQSSLPRRPTM--NSFPSPRSQTH 570
T P + + + ++ L+T C T ++ T S+ P PT+ S +P + T+
Sbjct: 369 TPPPPASTSSTGTSSSPLLSTSTSCTT--STSIPPTGNSTTPVTPTVPPTSSSTPLTTTN 426
Query: 569 ASSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSV 390
++ + +TPV ++ CT TS P T + S P +N +T S
Sbjct: 427 CTTSTSVPYTSTPVTSTPLATTNCTTSTSVPY--TSTPVTSTPLTTTNCTTSTSIPYTST 484
Query: 389 STTSHP 372
TS P
Sbjct: 485 PVTSTP 490
Score = 28.3 bits (60), Expect = 1.5
Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 4/112 (3%)
Frame = -1
Query: 701 NARXLTTXQYCPTPITSHWSRTRQSSLPRRPTMNSFP---SPRSQTHASSPPTRW*NATP 531
N T+ Y TP+TS T + S P +P + T+ ++ + +TP
Sbjct: 449 NCTTSTSVPYTSTPVTSTPLTTTNCTTSTSIPYTSTPVTSTPLTTTNCTTSTSVPYTSTP 508
Query: 530 VMASTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQ-PVSRSVSTTS 378
V +S + T VTS P T + + SVL S+ P++ + TTS
Sbjct: 509 VTSSNYTISSSTPVTSTPV--TTTNCTTSTSVLYTSTPVTSTPLATTNCTTS 558
Score = 27.5 bits (58), Expect = 2.5
Identities = 25/96 (26%), Positives = 43/96 (44%)
Frame = -1
Query: 665 TPITSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVT 486
TP+T+ + T +S+P T + +P + T+ ++ + +TPV ++ CT T
Sbjct: 420 TPLTTT-NCTTSTSVPYTSTPVT-STPLATTNCTTSTSVPYTSTPVTSTPLTTTNCTTST 477
Query: 485 SYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTS 378
S P T + S P +N +T S TS
Sbjct: 478 SIPY--TSTPVTSTPLTTTNCTTSTSVPYTSTPVTS 511
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.7 bits (61), Expect = 1.1
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = -1
Query: 743 TKPXXPTXXXSXSLNARXLTTXQYCPTPITSHWS---RTRQSSLPRRPTMNSFPSPRSQT 573
T P PT S L + T + P P S + T +SS+P P N+ PSP S +
Sbjct: 1215 TAPPVPTP--SAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPS-PHSNASPSPTSSS 1271
Query: 572 HASSPPTR 549
AS+ P R
Sbjct: 1272 MASAAPAR 1279
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -3
Query: 582 ITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 457
+ ACFEP N C H K C L + KD N ++
Sbjct: 361 LCGACFEPINAKCYCG-LHSKTYPCSSLPSPSISKKDENGSV 401
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +1
Query: 454 SDGRVHILGYDVTTVQHTASHVLAMTGVAFHHLVGGLEACVCDLGDGK 597
S G +LGY ++ A++V+A + V HL+ G D + K
Sbjct: 407 SAGLTSLLGYHLSVKTPQATYVVARSIVMLDHLIDGYSMAFPDFSESK 454
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 28.3 bits (60), Expect = 1.5
Identities = 45/159 (28%), Positives = 65/159 (40%), Gaps = 5/159 (3%)
Frame = -1
Query: 686 TTXQYCPTPITSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLA 507
TT TP++S S ++ T S + + T ASS P T V ++T +
Sbjct: 315 TTTSASSTPLSSVSSANSTTATSTSSTPLSSVNSTTATSASSTP-----LTSVNSTTATS 369
Query: 506 VCCTVVTSYPRM*TRPSLPSKPSVLSNS--STGVQPVSRSVSTTSHPPWCPEATWPRFNV 333
T +TS + S S P +NS ST V + S +T+S P ++ P +
Sbjct: 370 ASSTPLTSVNST-SATSASSTPLTSANSTTSTSVSSTAPSYNTSSVLPTSSVSSTPLSSA 428
Query: 332 XXXXXXXXXXXPKLGLALTT-SSTSCTP--SVLSCTGTS 225
P + TT +S S TP SV S T TS
Sbjct: 429 NSTTATSASSTPLSSVNSTTATSASSTPLSSVNSTTATS 467
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 28.3 bits (60), Expect = 1.5
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -1
Query: 290 GLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWLPS--RRITKKSAWTPLKARVR 117
G+ TS TS T S S++ S+P P W P+ S+ TP+ V
Sbjct: 148 GVPKFTSDTSSTVSSTPSLNHSLQNSMPPSTPTPPPVWAPTIVSSALGTSSKTPVYVVVD 207
Query: 116 EPKSTK 99
EP+ TK
Sbjct: 208 EPRFTK 213
>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1158
Score = 26.2 bits (55), Expect = 5.9
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 632 QSSLPRRPTMNSFPSPRSQTHASSPPTR 549
+ SLPRRP+ +P S T ++ PP +
Sbjct: 738 RGSLPRRPSSALLTNPISITKSNPPPVK 765
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 26.2 bits (55), Expect = 5.9
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = -1
Query: 458 SLPSKPSV---LSNSSTGVQPVSRSVSTTSHP 372
+LP KPS+ +++S V+P S STTS+P
Sbjct: 5 TLPPKPSISPSIASSFPTVKPFSSQNSTTSNP 36
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 25.8 bits (54), Expect = 7.8
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 477 WVRRHHGTAYSKPCTCHDGG 536
W R H Y+KPC DGG
Sbjct: 16 WRRDHPFGFYAKPCKSSDGG 35
>SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1116
Score = 25.8 bits (54), Expect = 7.8
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 737 PXXPTXXXSXSLNARXLTTXQYCPTPITSHWSRTRQSSLPRRPTM 603
P P+ S S+ R + P P T S R+++L RRP++
Sbjct: 521 PQSPSSNTSASVLTRNFVAHRDPPPPPTETSSLRRKNTLTRRPSI 565
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,806,003
Number of Sequences: 5004
Number of extensions: 60089
Number of successful extensions: 242
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 241
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 420459900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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