Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_A14
         (828 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY047579-1|AAK77311.1|  422|Drosophila melanogaster GH09088p pro...    31   1.5  
AE014134-2814|AAF53593.1|  422|Drosophila melanogaster CG6304-PA...    31   1.5  
AE014296-410|ABI31230.1| 3651|Drosophila melanogaster CG33484-PD...    29   7.8  

>AY047579-1|AAK77311.1|  422|Drosophila melanogaster GH09088p
           protein.
          Length = 422

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 16/50 (32%), Positives = 29/50 (58%)
 Frame = -2

Query: 572 PFGSKIDHQARKGENHRKILRSSSEAGRQCRLVQRSPGLGRQQGQD*SQS 423
           P G++IDH+ R+ E+ RKI   + +   Q R+  R P +   +G + S++
Sbjct: 129 PAGNRIDHEERRREHDRKIAVEALKLAEQRRM--RDPVIAPTEGNENSKN 176


>AE014134-2814|AAF53593.1|  422|Drosophila melanogaster CG6304-PA
           protein.
          Length = 422

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 16/50 (32%), Positives = 29/50 (58%)
 Frame = -2

Query: 572 PFGSKIDHQARKGENHRKILRSSSEAGRQCRLVQRSPGLGRQQGQD*SQS 423
           P G++IDH+ R+ E+ RKI   + +   Q R+  R P +   +G + S++
Sbjct: 129 PAGNRIDHEERRREHDRKIAVEALKLAEQRRM--RDPVIAPTEGNENSKN 176


>AE014296-410|ABI31230.1| 3651|Drosophila melanogaster CG33484-PD,
            isoform D protein.
          Length = 3651

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 19/66 (28%), Positives = 33/66 (50%)
 Frame = +3

Query: 141  PQSRRSP*LSTCASSFRLCPYSWFSMSKTLPVSSTTGVSFHRWRFSFRVVGAPRLPVSXT 320
            P  R+ P L+T  +SF+   Y+  +   +    S +  SF+  + S  + GAP+L     
Sbjct: 2814 PGIRKQPQLTTMETSFKSSGYTADTEEHSSYRKSES--SFYETKSSSTMGGAPQLQTQFP 2871

Query: 321  RLRPRP 338
            +L+P P
Sbjct: 2872 KLQPEP 2877


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,508,926
Number of Sequences: 53049
Number of extensions: 679426
Number of successful extensions: 2082
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2082
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3921660132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)