Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_A07
(765 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 71 1e-13
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 67 3e-12
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 56 4e-09
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 52 1e-07
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 52 1e-07
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 50 4e-07
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 50 4e-07
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 45 1e-05
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 44 3e-05
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 42 7e-05
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 41 2e-04
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 34 0.019
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 28 1.3
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 27 3.9
SPAC13G6.06c |||glycine cleavage complex subunit P|Schizosacchar... 27 3.9
SPCC126.14 |prp18||U5 snRNP-associated protein Prp18|Schizosacch... 27 3.9
SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pomb... 27 3.9
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 26 5.1
SPAC29A4.11 |rga3||GTPase activating protein Rga3|Schizosaccharo... 26 5.1
SPBC2F12.11c |rep2||transcriptional activator Rep2|Schizosacchar... 26 5.1
SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regula... 26 6.8
SPCC548.05c |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 25 9.0
SPAC1782.08c |rex3||exonuclease Rex3 |Schizosaccharomyces pombe|... 25 9.0
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 71.3 bits (167), Expect = 1e-13
Identities = 31/78 (39%), Positives = 45/78 (57%)
Frame = -3
Query: 544 CGKRFSDDVSYEGHYIKHTENKPFKCSECPKSFNHKTDLRRHMCLHSDCKPFACDHCGKG 365
C KRF+ + + H HT +PF+CS C KSF + D RRH LH+ K FAC C +
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQR 636
Query: 364 FIRKDHMVKHFDTHLKKN 311
F R D + +H+ + + +N
Sbjct: 637 FARMDALNRHYKSEVGQN 654
Score = 45.6 bits (103), Expect = 8e-06
Identities = 24/71 (33%), Positives = 31/71 (43%)
Frame = -3
Query: 631 CDKLXNKACYLTQHNKTFHSGAKPFKCDRCGKRFSDDVSYEGHYIKHTENKPFKCSECPK 452
C+K +A L H T H+ +PF+C C K F+ H HT K F C C +
Sbjct: 577 CNKRFTRAYNLKSHMNT-HTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQ 635
Query: 451 SFNHKTDLRRH 419
F L RH
Sbjct: 636 RFARMDALNRH 646
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Frame = -3
Query: 613 KACYLTQHNKT----FHSGAKPFKCDRCGKRFSDDVSYEGHY 500
K + QH+K H+G K F C C +RF+ + HY
Sbjct: 606 KKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRHY 647
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 66.9 bits (156), Expect = 3e-12
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Frame = -3
Query: 589 NKTFHSGAKPFKC--DRCGKRFSDDVSYEGHYIKHTENKPFKC--SECPKSFNHKTDLRR 422
+K S K F C + CGK++S E H H+ +PF C + C K+F K+ L+
Sbjct: 13 SKNLRSAKKIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKI 72
Query: 421 HMCLHSDCKPFAC--DHCGKGFIRKDHMVKHFDTHLK 317
H H++ KPF+C D C F + H+ +H + H K
Sbjct: 73 HKRCHTNVKPFSCHYDGCDAQFYTQQHLERHIEVHRK 109
Score = 59.7 bits (138), Expect = 4e-10
Identities = 39/114 (34%), Positives = 52/114 (45%), Gaps = 9/114 (7%)
Frame = -3
Query: 634 ECDKLXNKACYLTQHNKTFHSGAKPFKCDR--CGKRFSDDVSYEGHYIKHTENKPFKC-- 467
EC K ++ L QH +T HS +PF CD C K F + H HT KPF C
Sbjct: 29 ECGKKYSRPSLLEQHLRT-HSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHY 87
Query: 466 SECPKSFNHKTDLRRHMCLHSDCKPFAC--DHCGKGFIRKDHMVKHFD---THL 320
C F + L RH+ +H KP+AC + C + F + + H THL
Sbjct: 88 DGCDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACHTHL 141
Score = 46.0 bits (104), Expect = 6e-06
Identities = 32/119 (26%), Positives = 48/119 (40%), Gaps = 7/119 (5%)
Frame = -3
Query: 664 SFSMPXHKCYECDKLXNKACYLTQHNKTFHSGAKPFKCDRCGKRFSDDVSYEGHYIKHT- 488
S+S P C + K L H + H + C CG++F H + H
Sbjct: 174 SYSCPHESCVGHEGF-EKWSQLQNHIREAHVPS----CSICGRQFKTAAHLRHHVVLHQT 228
Query: 487 ---ENKPFKC--SECPKSFNHKTDLRRHMC-LHSDCKPFACDHCGKGFIRKDHMVKHFD 329
E K + C C KSF + L++H+ +H F CD CG F K + +H +
Sbjct: 229 TLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHLE 287
Score = 34.3 bits (75), Expect = 0.019
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = -3
Query: 631 CDKLXNKACYLTQHNKTFHSGAKPFKCDRCGKRFSDDVSYEGHYIKHTENKPFK--CSEC 458
C K ++ L +H H G F CD CG +F + H + T K K +EC
Sbjct: 243 CKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHLERGTCKKAHKPYINEC 302
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 56.4 bits (130), Expect = 4e-09
Identities = 23/70 (32%), Positives = 38/70 (54%)
Frame = -3
Query: 544 CGKRFSDDVSYEGHYIKHTENKPFKCSECPKSFNHKTDLRRHMCLHSDCKPFACDHCGKG 365
C KR + + E H H ++P++C C F DL+RH+ +H + +P+ C+ C K
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKR 508
Query: 364 FIRKDHMVKH 335
F R D + +H
Sbjct: 509 FNRLDALNRH 518
Score = 41.5 bits (93), Expect = 1e-04
Identities = 22/71 (30%), Positives = 32/71 (45%)
Frame = -3
Query: 631 CDKLXNKACYLTQHNKTFHSGAKPFKCDRCGKRFSDDVSYEGHYIKHTENKPFKCSECPK 452
C+K + + H +T H +P++CD C F + H H +P+ C EC K
Sbjct: 450 CNKRIARKYNVESHIQT-HLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVC-ECLK 507
Query: 451 SFNHKTDLRRH 419
FN L RH
Sbjct: 508 RFNRLDALNRH 518
Score = 37.1 bits (82), Expect = 0.003
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -3
Query: 460 CPKSFNHKTDLRRHMCLHSDCKPFACDHCGKGFIRKDHMVKHFDTH 323
C K K ++ H+ H +P+ CD C GF+R + +H H
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIH 495
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 51.6 bits (118), Expect = 1e-07
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = -3
Query: 481 KPFKCSECPKSFNHKTDLRRHM-CLHSDCKPFACDHCGKGFIRKDHMVKHFDTHL 320
K F C EC K F LRRH+ LH+ KPF C CGK F R+D++ +H H+
Sbjct: 421 KSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHV 474
Score = 47.2 bits (107), Expect = 3e-06
Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -3
Query: 571 GAKPFKCDRCGKRFSDDVSYEGHYIK-HTENKPFKCSECPKSFNHKTDLRRHMCLHSDCK 395
G K F C C K+F H HT KPF C C K F+ + +LR+H LH +
Sbjct: 419 GGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVCI-CGKRFSRRDNLRQHERLHVNAS 477
Query: 394 P-FAC 383
P AC
Sbjct: 478 PRLAC 482
Score = 41.9 bits (94), Expect = 1e-04
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = -3
Query: 640 CYECDKLXNKACYLTQHNKTFHSGAKPFKCDRCGKRFSDDVSYEGHYIKHTENKP 476
C EC K ++ +L +H ++ H+ KPF C CGKRFS + H H P
Sbjct: 425 CPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNASP 478
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 51.6 bits (118), Expect = 1e-07
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Frame = -3
Query: 475 FKCS--ECPKSFNHKTDLRRHMCLHSDCKPFACDHCGKGFIRKDHMVKHF-DTHLKK 314
F C+ +CPKSF K LRRH H + K F+C C + F R D + +H HL+K
Sbjct: 26 FYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMHLQK 82
Score = 30.3 bits (65), Expect = 0.31
Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
Frame = -3
Query: 601 LTQHNKTFHSGAKPFKCDR--CGKRFSDDVSYEGHYIKHTENKPFKCSECPKSFNHKTDL 428
L + ++ G F C C K F+ H H K F CS C ++F L
Sbjct: 12 LKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVL 71
Query: 427 RRHM 416
RH+
Sbjct: 72 NRHV 75
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 50.0 bits (114), Expect = 4e-07
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = -3
Query: 481 KPFKCSECPKSFNHKTDLRRHMCLHSDCKPFACDH--CGKGFIRKDHMVKHFDTHLKK 314
K ++C C + F+ + RH+ H+ KPF C + C K F R+D +++H THL+K
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTHLRK 59
Score = 39.5 bits (88), Expect = 5e-04
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = -3
Query: 565 KPFKCDRCGKRFSDDVSYEGHYIKHTENKPFKCS--ECPKSFNHKTDLRRHMCLH 407
K ++C C + F H HT KPF+CS C K F + +L RH+ H
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 31.1 bits (67), Expect = 0.18
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = -3
Query: 655 MPXHKCYECDKLXNKACYLTQHNKTFHSGAKPFKCD--RCGKRFS 527
M ++C C ++ ++ + +H ++ H+G KPF+C C KRF+
Sbjct: 1 MKSYECPFCKRVFHRQEHQVRHIRS-HTGEKPFECSYPSCKKRFT 44
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 50.0 bits (114), Expect = 4e-07
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = -3
Query: 475 FKCS--ECPKSFNHKTDLRRHMCLHSDCKPFACDHCGKGFIRKDHMVKHFD-THLKKN 311
+KC C KSF K RRH H++ K F C HC F R D + +H + H+K+N
Sbjct: 17 YKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKHVKQN 74
Score = 40.3 bits (90), Expect = 3e-04
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = -3
Query: 589 NKTFHSGAKPFKCD--RCGKRFSDDVSYEGHYIKHTENKPFKCSECPKSFNHKTDLRRHM 416
++ + G +KCD C K F+ H+ HT +K F C C SF L RH+
Sbjct: 7 SRAYQEGDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHV 66
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 45.2 bits (102), Expect = 1e-05
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = -3
Query: 484 NKPFKCSECPKSFNHKTDLRRHMCLHSDCKPFACDH--CGKGFIRKDHMVKHFDTH 323
N ++C+EC + F+ + L+ H H+ +PF CD+ CGK F + +M +H H
Sbjct: 465 NVRYRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 44.0 bits (99), Expect = 2e-05
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = -3
Query: 559 FKCDRCGKRFSDDVSYEGHYIKHTENKPFKC--SECPKSFNHKTDLRRHMCLH 407
++C C + FS S + H HT +PF C + C K+FN ++++RRH +H
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 30.3 bits (65), Expect = 0.31
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -3
Query: 646 HKCYECDKLXNKACYLTQHNKTFHSGAKPFKCD--RCGKRFS 527
++C EC + ++ L H + H+G +PF CD CGK F+
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYS-HTGERPFVCDYAGCGKAFN 508
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 43.6 bits (98), Expect = 3e-05
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = -3
Query: 481 KPFKCSECPKSFNHKTDLRRHMCLHSDCKPFACDH--CGKGFIRKDHMVKHFDTHLKKN 311
+P+KC C K+F RH+ H+ KP C C K F R D + +H H N
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTNAN 82
Score = 39.1 bits (87), Expect = 7e-04
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -3
Query: 565 KPFKCDRCGKRFSDDVSYEGHYIKHTENKPFKCS--ECPKSFNHKTDLRRHMCLHSD 401
+P+KC C K F H HT KP C+ C K F+ +L RH +H++
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTN 80
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 42.3 bits (95), Expect = 7e-05
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -3
Query: 475 FKCSECPKSFNHKTDLRRHMCLHSDCKPFACDHCGKGFIRKDHMVKH 335
F C +C K F +L RH HS +P C +C RKD + +H
Sbjct: 31 FPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRH 77
Score = 38.7 bits (86), Expect = 9e-04
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -3
Query: 559 FKCDRCGKRFSDDVSYEGHYIKHTENKPFKCSECPKSFNHKTDLRRHM-CLHSD 401
F CD+C KRF+ + H H++ +P C C K L+RH+ H+D
Sbjct: 31 FPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHND 84
Score = 28.7 bits (61), Expect = 0.96
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 391 FACDHCGKGFIRKDHMVKHFDTHLK 317
F CD C K F R +++ +H H K
Sbjct: 31 FPCDQCAKRFTRHENLTRHKACHSK 55
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 40.7 bits (91), Expect = 2e-04
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Frame = -3
Query: 481 KPFKCSECPKSFNHKTDLRRHMCLHSDCKPFACDH-------CGKGFIRKDHMVKH 335
K + C C ++F L+RH+ H++ KPF C CG+ F R+D +++H
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRH 123
Score = 35.1 bits (77), Expect = 0.011
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Frame = -3
Query: 565 KPFKCDRCGKRFSDDVSYEGHYIKHTENKPFKCSE-------CPKSFNHKTDLRRH-MCL 410
K + C+ C + F+ + H HT KPF CSE C + F+ + L RH +
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKI 127
Query: 409 HSDCKP 392
H + +P
Sbjct: 128 HRNPQP 133
Score = 28.3 bits (60), Expect = 1.3
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -3
Query: 397 KPFACDHCGKGFIRKDHMVKHFDTH 323
K + C+ C + F R +H+ +H +H
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSH 92
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 34.3 bits (75), Expect = 0.019
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = -3
Query: 553 CDRCGKRFSDDVSYEGHYIKHTENKPFKCS--ECPKSFNHKTDLRRHM 416
C R G + + H HT KPF CS EC +SF L +HM
Sbjct: 80 CPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHM 127
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 28.3 bits (60), Expect = 1.3
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 487 ENKPFKCSECPKSFNHKTDLRRH 419
ENKP++C C K + + L+ H
Sbjct: 395 ENKPYRCEVCSKRYKNLNGLKYH 417
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 26.6 bits (56), Expect = 3.9
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -3
Query: 550 DRCGKRFSDDVSYEGHYIKHTEN 482
++C K S D + E H++KHT N
Sbjct: 413 EKCVKLVSLDTANEKHFLKHTPN 435
>SPAC13G6.06c |||glycine cleavage complex subunit
P|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1017
Score = 26.6 bits (56), Expect = 3.9
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -2
Query: 239 DANAPHSLDHSFKDEETLQHIIKNEMNRNNFCLHRFIVD 123
DA+ L+ ++ + H N+NN C H FI+D
Sbjct: 840 DASKAALLNANYMAKRLSSHYKLVYTNKNNLCAHEFILD 878
>SPCC126.14 |prp18||U5 snRNP-associated protein
Prp18|Schizosaccharomyces pombe|chr 3|||Manual
Length = 343
Score = 26.6 bits (56), Expect = 3.9
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 52 LVFVHITAKYSNVFCNLSFNFIKISTMNLCKQKLLRFISF 171
+V +H + + + N S N +K C Q L RFI+F
Sbjct: 291 MVGIHERSAHQRLQANPSSNILKDEKKRKCLQALKRFITF 330
>SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 478
Score = 26.6 bits (56), Expect = 3.9
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 643 KCYECDKLXNKACYLTQHNKTFH 575
+C +CD + K LT H +T+H
Sbjct: 140 RCDKCDMMFVKQSGLTNHKRTYH 162
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 26.2 bits (55), Expect = 5.1
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Frame = +1
Query: 343 PCGLF**NLCRSGHTRTACSQSANTC--VCASLF-CG 444
PCG + GH R +CS TC +C L CG
Sbjct: 450 PCGKEDISFLLKGHERKSCSDPIPTCENICGKLLSCG 486
>SPAC29A4.11 |rga3||GTPase activating protein
Rga3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 969
Score = 26.2 bits (55), Expect = 5.1
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Frame = -3
Query: 469 CSECPKSFNHKT---DLRRHMCLHSDCKPFACDHCGKGFIRKDHMV 341
C C ++F + HM H DC F C C KG D M+
Sbjct: 19 CFRCGQAFQRRETPISFGGHMW-HKDC--FCCTKCDKGLEHSDQML 61
>SPBC2F12.11c |rep2||transcriptional activator
Rep2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 219
Score = 26.2 bits (55), Expect = 5.1
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -3
Query: 469 CSECPKSFNHKTDLRRHMCLHSDCKPF 389
CS+C +FNH T L H + PF
Sbjct: 177 CSKCNTTFNHSTALMMHEATCLNQVPF 203
>SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regulator
protein Rif1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1400
Score = 25.8 bits (54), Expect = 6.8
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +3
Query: 354 FLMKPLPQWSHANGLQSECKHMCLRKSVLWLN 449
FLM PQ + LQ C + C+ L LN
Sbjct: 934 FLMNAFPQLEKSTTLQKSCTNFCILILQLLLN 965
>SPCC548.05c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 468
Score = 25.4 bits (53), Expect = 9.0
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 562 PFKCDRCGKRFSDD 521
P+ CD CG + SDD
Sbjct: 204 PYHCDHCGFQISDD 217
>SPAC1782.08c |rex3||exonuclease Rex3 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 540
Score = 25.4 bits (53), Expect = 9.0
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -3
Query: 556 KCDRCGKRFSD 524
+CDRCG RF+D
Sbjct: 298 ECDRCGTRFAD 308
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,379,550
Number of Sequences: 5004
Number of extensions: 45632
Number of successful extensions: 184
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 167
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 367316502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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