Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_A05
(854 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 162 3e-40
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 162 3e-40
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 162 3e-40
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 52 7e-07
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z78064-8|CAO82042.1| 357|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z19158-2|CAA79571.3| 262|Caenorhabditis elegans Hypothetical pr... 29 4.2
AL033514-38|CAA22111.2| 341|Caenorhabditis elegans Hypothetical... 29 4.2
U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like p... 29 5.6
U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like p... 29 5.6
AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like ... 29 5.6
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 162 bits (393), Expect = 3e-40
Identities = 82/131 (62%), Positives = 95/131 (72%), Gaps = 2/131 (1%)
Frame = -2
Query: 721 VKNXSXQGMXXXYVAGDSQNNPPKGAADL--QLKSLG*PSWSXSNGYTPVLDCHTAHIAC 548
VKN S + + V DS+ +P K A Q+ + P SNGYTPVLDCHTAHIAC
Sbjct: 278 VKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPG-QISNGYTPVLDCHTAHIAC 336
Query: 547 KFAEIKEKADRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMR 368
KF E+KEK DRRTGK E PK +KSGDA IV L+P+KPLCVESF ++ PLGRFAVRDMR
Sbjct: 337 KFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDMR 396
Query: 367 QTVAVGVIKAV 335
QTVAVGVIK+V
Sbjct: 397 QTVAVGVIKSV 407
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 162 bits (393), Expect = 3e-40
Identities = 82/131 (62%), Positives = 95/131 (72%), Gaps = 2/131 (1%)
Frame = -2
Query: 721 VKNXSXQGMXXXYVAGDSQNNPPKGAADL--QLKSLG*PSWSXSNGYTPVLDCHTAHIAC 548
VKN S + + V DS+ +P K A Q+ + P SNGYTPVLDCHTAHIAC
Sbjct: 312 VKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPG-QISNGYTPVLDCHTAHIAC 370
Query: 547 KFAEIKEKADRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMR 368
KF E+KEK DRRTGK E PK +KSGDA IV L+P+KPLCVESF ++ PLGRFAVRDMR
Sbjct: 371 KFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDMR 430
Query: 367 QTVAVGVIKAV 335
QTVAVGVIK+V
Sbjct: 431 QTVAVGVIKSV 441
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 162 bits (393), Expect = 3e-40
Identities = 82/131 (62%), Positives = 95/131 (72%), Gaps = 2/131 (1%)
Frame = -2
Query: 721 VKNXSXQGMXXXYVAGDSQNNPPKGAADL--QLKSLG*PSWSXSNGYTPVLDCHTAHIAC 548
VKN S + + V DS+ +P K A Q+ + P SNGYTPVLDCHTAHIAC
Sbjct: 312 VKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPG-QISNGYTPVLDCHTAHIAC 370
Query: 547 KFAEIKEKADRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMR 368
KF E+KEK DRRTGK E PK +KSGDA IV L+P+KPLCVESF ++ PLGRFAVRDMR
Sbjct: 371 KFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDMR 430
Query: 367 QTVAVGVIKAV 335
QTVAVGVIK+V
Sbjct: 431 QTVAVGVIKSV 441
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 51.6 bits (118), Expect = 7e-07
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Frame = -2
Query: 598 SNGYTPVLDCHTAHIACKFAEIKEKADRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVE 419
++GY+ VL +A + D++TG+ K +K + I+ L +P +E
Sbjct: 445 ASGYSCVLHIQSAVEEVTVKGVIATIDKKTGEKKRA--KFVKQDEKCIMRLESPEPFVLE 502
Query: 418 SFQEFPPLGRFAVRDMRQTVAVG-VIKAV 335
F+E+P LGRF +RD +T+A+G V+K V
Sbjct: 503 PFKEYPYLGRFTLRDEGKTIAIGKVLKVV 531
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/81 (24%), Positives = 38/81 (46%)
Frame = -2
Query: 577 LDCHTAHIACKFAEIKEKADRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPP 398
L H+ + C F + ++ G+ + P+ I G +A+V + + +E+F
Sbjct: 508 LYAHSLCVPCTFTNLLYTINKSNGEILKKGPRFIAKGASAVVEIETEYDIAIETFTSCRA 567
Query: 397 LGRFAVRDMRQTVAVGVIKAV 335
LGR R T+A G+++ V
Sbjct: 568 LGRVTFRAGGNTIAAGIVEKV 588
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/81 (24%), Positives = 38/81 (46%)
Frame = -2
Query: 577 LDCHTAHIACKFAEIKEKADRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPP 398
L H+ + C F + ++ G+ + P+ I G +A+V + + +E+F
Sbjct: 526 LYAHSLCVPCTFTNLLYTINKSNGEILKKGPRFIAKGASAVVEIETEYDIAIETFTSCRA 585
Query: 397 LGRFAVRDMRQTVAVGVIKAV 335
LGR R T+A G+++ V
Sbjct: 586 LGRVTFRAGGNTIAAGIVEKV 606
>Z78064-8|CAO82042.1| 357|Caenorhabditis elegans Hypothetical
protein F57B1.9a protein.
Length = 357
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +3
Query: 219 MKYRSCMKNCAVNSSSYFLPLVAFSAALVTLPPPASLKLTALMTPTATVCLM 374
M Y +C ++N Y L ++A+V LPPP ++ + ++ A C++
Sbjct: 188 MMYNNCRYRYSLNVLHY--ELYCQTSAVVNLPPPKAISIMEIVIQFAIPCII 237
>Z19158-2|CAA79571.3| 262|Caenorhabditis elegans Hypothetical
protein T23G5.3 protein.
Length = 262
Score = 29.1 bits (62), Expect = 4.2
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = +3
Query: 273 LPLVAFSAALVTLPPPASLKLTALMTPTATVCLMSRTAKRPRGGNSWKDST 425
+P+V + L PPP L +LM P TV + R K P G NS K T
Sbjct: 129 VPIVPRNLLLSKPPPPPPPPLPSLMQPKDTVQIPMR--KPPTGRNSKKIKT 177
>AL033514-38|CAA22111.2| 341|Caenorhabditis elegans Hypothetical
protein Y75B8A.33 protein.
Length = 341
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -1
Query: 194 KRATNSFLFYIFYKACNVTLFYNLYKVIHNISETFC 87
KR NS++F I+ C + F Y++ + +C
Sbjct: 262 KRDVNSYVFVIWGVVCQILFFLTTYRIAELVVRIYC 297
>U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform b protein.
Length = 564
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 577 LDCHTAHIACKFAEIKEKADRRTGKSTE 494
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform a protein.
Length = 690
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 577 LDCHTAHIACKFAEIKEKADRRTGKSTE 494
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like
protein protein.
Length = 690
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 577 LDCHTAHIACKFAEIKEKADRRTGKSTE 494
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,490,586
Number of Sequences: 27780
Number of extensions: 299245
Number of successful extensions: 752
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 752
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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