Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_A04
         (812 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029153-1|ABJ17088.1|  708|Drosophila melanogaster SD01194p pro...    31   1.9  
BT028873-1|ABI34254.1|  708|Drosophila melanogaster SD20656p pro...    31   1.9  
AY051453-1|AAK92877.1|  444|Drosophila melanogaster GH11985p pro...    29   5.7  
AJ252085-1|CAB64597.1|  542|Drosophila melanogaster Importin-alp...    29   5.7  
AE014134-907|AAF52238.1|  444|Drosophila melanogaster CG14024-PA...    29   5.7  

>BT029153-1|ABJ17088.1|  708|Drosophila melanogaster SD01194p
           protein.
          Length = 708

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
 Frame = +2

Query: 125 GPLNLVGTLSPRHKNISEHFH*D--PSHYLSASSTTISTGLCPTNTFLRISSQYSFSSVK 298
           GP + +  +SP H N SE    D   S Y  +S +T  +  C T+     SS YS S  +
Sbjct: 70  GPSSRMRNISPIHSNASESTEADCSDSSYSDSSYSTSGSSSC-TSFLSSTSSSYSSSDSE 128

Query: 299 LSSSGCPKCCSKVSFKC 349
               G  K   +    C
Sbjct: 129 PEPEGSVKKFERTKHSC 145


>BT028873-1|ABI34254.1|  708|Drosophila melanogaster SD20656p
           protein.
          Length = 708

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
 Frame = +2

Query: 125 GPLNLVGTLSPRHKNISEHFH*D--PSHYLSASSTTISTGLCPTNTFLRISSQYSFSSVK 298
           GP + +  +SP H N SE    D   S Y  +S +T  +  C T+     SS YS S  +
Sbjct: 70  GPSSRMRNISPIHSNASESTEADCSDSSYSDSSYSTSGSSSC-TSFLSSTSSSYSSSDSE 128

Query: 299 LSSSGCPKCCSKVSFKC 349
               G  K   +    C
Sbjct: 129 PEPEGSVKKFERTKHSC 145


>AY051453-1|AAK92877.1|  444|Drosophila melanogaster GH11985p
           protein.
          Length = 444

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = +2

Query: 560 AEGSSCASAAPNAPHPPRDTSERHAGEYSRQPHDKAYRHLTRAS 691
           A   S +S A   P PP  T+     EYS + H +  R L R S
Sbjct: 89  ASAGSSSSQAAAPPPPPPATTLNPVYEYSEELHSRTERELQRRS 132


>AJ252085-1|CAB64597.1|  542|Drosophila melanogaster Importin-alpha1
           protein.
          Length = 542

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 23/115 (20%), Positives = 44/115 (38%), Gaps = 1/115 (0%)
 Frame = -3

Query: 795 YGXG*XXSDNPFCQEKXLEYGLLNVXLTLVQSEQGEALVK-CLYALSCGCREYSPACRSL 619
           +  G    D+P C++  L  G+L   L ++ +     +++  ++ LS  CR  SP     
Sbjct: 202 WALGNIAGDSPMCRDHLLGSGILEPLLHVLSNSDRITMIRNAVWTLSNLCRGKSPPADFA 261

Query: 618 VSRXXXXXXXXXXAQDEPSARTKAAFLIRYLASQYSDXKEQFIQHNVVRTIAEQL 454
                           +   ++   + I YL+   +D  +  I   V R + E L
Sbjct: 262 KISHGLPILARLLKYTDADVQSDTCWAIGYLSDGPNDNIQAVIDAGVCRRLVELL 316


>AE014134-907|AAF52238.1|  444|Drosophila melanogaster CG14024-PA
           protein.
          Length = 444

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = +2

Query: 560 AEGSSCASAAPNAPHPPRDTSERHAGEYSRQPHDKAYRHLTRAS 691
           A   S +S A   P PP  T+     EYS + H +  R L R S
Sbjct: 89  ASAGSSSSQAAAPPPPPPATTLNPVYEYSEELHSRTERELQRRS 132


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,247,225
Number of Sequences: 53049
Number of extensions: 639274
Number of successful extensions: 2223
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2223
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3818998872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)