Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_A03
         (915 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81056-9|CAB02908.2|  292|Caenorhabditis elegans Hypothetical pr...    31   1.5  
U41541-2|ABA54426.1|  526|Caenorhabditis elegans Hypothetical pr...    30   2.0  
U41541-1|ABA54425.1|  795|Caenorhabditis elegans Hypothetical pr...    30   2.0  
AF024500-2|AAB70360.1|  467|Caenorhabditis elegans Hypothetical ...    29   4.6  

>Z81056-9|CAB02908.2|  292|Caenorhabditis elegans Hypothetical
           protein F09F3.11 protein.
          Length = 292

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -2

Query: 725 TCIGFRSTLPLLYITFVPARFTYFQTVQPCCCGCSA 618
           TC+GFR   P     F PA FT+ +   PC  G S+
Sbjct: 125 TCLGFR---PNCGFVFYPATFTWDKEYTPCATGMSS 157


>U41541-2|ABA54426.1|  526|Caenorhabditis elegans Hypothetical
           protein C41A3.2b protein.
          Length = 526

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +1

Query: 445 SQKKCSLLSPKIKHMCNKLIKYWGVIAR*HSCSI 546
           S+K  S+++ K+ H CN  + Y  V A  H C++
Sbjct: 205 SEKSASVINEKVNHNCNICVVYAPVAATTHVCTM 238


>U41541-1|ABA54425.1|  795|Caenorhabditis elegans Hypothetical
           protein C41A3.2a protein.
          Length = 795

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +1

Query: 445 SQKKCSLLSPKIKHMCNKLIKYWGVIAR*HSCSI 546
           S+K  S+++ K+ H CN  + Y  V A  H C++
Sbjct: 205 SEKSASVINEKVNHNCNICVVYAPVAATTHVCTM 238


>AF024500-2|AAB70360.1|  467|Caenorhabditis elegans Hypothetical
           protein K06H6.4 protein.
          Length = 467

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +3

Query: 531 AFMFNKTMIEV*SFLQKVFSK-NIQIHVSRCGAAAATRLHGLEICETSRNKCYI 689
           AF+  KT   + S+L ++++K ++  H S         +   +   TSRN+CYI
Sbjct: 4   AFLAGKTTSHLFSYLAEIYNKEDLHFHNSMEREGLLGDIKDNQSTSTSRNRCYI 57


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,633,061
Number of Sequences: 27780
Number of extensions: 333514
Number of successful extensions: 704
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 704
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)