Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_P23
         (972 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK094713-1|BAC04405.1|  945|Homo sapiens protein ( Homo sapiens ...    33   2.1  
BC131802-1|AAI31803.1| 1872|Homo sapiens KIAA0564 protein protein.     31   8.4  
AL591896-1|CAH73690.2|  763|Homo sapiens kelch domain containing...    31   8.4  

>AK094713-1|BAC04405.1|  945|Homo sapiens protein ( Homo sapiens
           cDNA FLJ37394 fis, clone BRAMY2027140, highly similar to
           RHO-GUANINE NUCLEOTIDE EXCHANGE FACTOR. ).
          Length = 945

 Score = 32.7 bits (71), Expect = 2.1
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -1

Query: 438 LDKQIPGRNLDSLHSDSSAIEERTDMNLC*HNSLADHQLRCMDS 307
           L + +PG  L+S    ++++E  +D N C   S +D  L+ M S
Sbjct: 755 LSRSVPGTTLESFRRSATSLESESDHNSCRSRSHSDELLQSMGS 798


>BC131802-1|AAI31803.1| 1872|Homo sapiens KIAA0564 protein protein.
          Length = 1872

 Score = 30.7 bits (66), Expect = 8.4
 Identities = 15/46 (32%), Positives = 21/46 (45%)
 Frame = +3

Query: 312 PCNAADGQQGNCVNINSCPYVLQLLKNPNEANLNYVRGSVCQGSEQ 449
           P   +    G+ VNI    Y L++ KNP     NY+  S+ Q   Q
Sbjct: 13  PTAGSGADTGDTVNIGDVSYKLKIPKNPELVPQNYISDSLAQSVVQ 58


>AL591896-1|CAH73690.2|  763|Homo sapiens kelch domain containing 7A
           protein.
          Length = 763

 Score = 30.7 bits (66), Expect = 8.4
 Identities = 28/95 (29%), Positives = 36/95 (37%), Gaps = 10/95 (10%)
 Frame = +3

Query: 324 ADGQQG-NCVNINSCPYVL-----QLLKNPNEANLNYVRGSVCQGSEQQSICCVTAPQST 485
           A+  QG +C N    PYVL        + P        RG     SEQ   CC +    T
Sbjct: 75  AEAPQGCSCENPRG-PYVLVTGATSTDRKPQRKGSGEERGGQGSDSEQVPPCCPSQETRT 133

Query: 486 AVTTTPRPKRVHACQSEMTATPPN----PEGKCCG 578
           AV + P P       SE  ++P       +G C G
Sbjct: 134 AVGSNPDPPHFPRLGSEPKSSPAGLIAAADGSCAG 168


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,736,622
Number of Sequences: 237096
Number of extensions: 2710203
Number of successful extensions: 7158
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7154
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12936258326
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)