Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_P21
(857 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0055 - 7863410-7863530,7864205-7864314,7864341-7864553,786... 36 0.041
03_02_0097 + 5602912-5603293,5604599-5604676,5604935-5604963 31 1.6
12_02_1215 + 27070164-27070302,27070308-27071098 30 2.1
01_07_0305 - 42631214-42631330,42631423-42631527,42633208-426332... 30 2.7
01_01_0672 + 5147916-5147976,5148087-5148166,5148329-5148973,514... 30 2.7
09_02_0305 - 7122320-7122436,7122781-7122787,7122833-7123023 29 3.6
07_03_1614 + 28152812-28153204,28153301-28153585,28153676-281539... 29 3.6
04_04_0260 + 23996775-23996865,23997031-23997566,23998407-239988... 29 3.6
10_01_0274 - 2901033-2901778,2902475-2902634 29 4.7
02_05_0589 - 30176354-30176829,30176895-30177075 29 4.7
02_05_0008 + 24934917-24935229,24936387-24936608,24936876-249375... 29 4.7
07_03_1204 + 24855052-24855210,24855411-24855974,24856157-248562... 29 6.3
03_01_0161 + 1307206-1307769,1307979-1308101,1308182-1308286,130... 29 6.3
01_01_0829 + 6471032-6471870,6472490-6472685,6472772-6472956,647... 29 6.3
11_02_0135 + 8683470-8683833,8686321-8686601 28 8.3
05_01_0326 - 2558237-2558344,2558605-2558706,2558867-2558944,255... 28 8.3
01_06_1179 - 35161229-35162368 28 8.3
10_08_0112 + 14893108-14893212,14894249-14894296 24 9.7
>05_03_0055 -
7863410-7863530,7864205-7864314,7864341-7864553,
7865342-7865406,7865511-7865635,7865936-7866164,
7866270-7866348
Length = 313
Score = 35.9 bits (79), Expect = 0.041
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = +1
Query: 556 PSSLCAATWGRRGIRSRNSSYHRRVPLLLSDRISAARYPARLLRRVLDIGSD 711
P + AA R + +SS RR LL R++AAR P RL RR + G++
Sbjct: 7 PLPIAAAAASRLRLPVLSSSVARREALLFGGRVAAARAPVRLARRGVSAGAE 58
>03_02_0097 + 5602912-5603293,5604599-5604676,5604935-5604963
Length = 162
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 522 SSLPH-PSLTASSKLALRRHLGSPRHPQPQFELPSPCSTTTIRPNQRCK 665
+SLP PS+ + AL R SPRHP P +P P T + +C+
Sbjct: 31 ASLPRRPSVIPPLRAALSR---SPRHPSPLEPIPPPVHRRTPHHSDQCR 76
>12_02_1215 + 27070164-27070302,27070308-27071098
Length = 309
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -2
Query: 625 GDGSSNCGCGCRGDPRWRRR 566
GDG++ GCGC G RW+RR
Sbjct: 147 GDGTA-AGCGCGGWSRWQRR 165
>01_07_0305 -
42631214-42631330,42631423-42631527,42633208-42633216,
42635198-42636142,42636349-42636450,42637210-42637302
Length = 456
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +1
Query: 541 LLQRRPS-SLCAATWGRRGIRSRNSSYHRRVPLLLSDRISAARYPAR 678
++ R P+ S+CAA W RRG R R P L R AR R
Sbjct: 291 VIPRAPNDSICAALWRRRGWRQRGRRSPAHPPWLRMGRGGGARCSRR 337
>01_01_0672 +
5147916-5147976,5148087-5148166,5148329-5148973,
5149111-5149341
Length = 338
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +3
Query: 453 LQPVSPVVRNADFTRPAPRRH--GSSSLPHPSLTASSKLALRRHLGSPRHPQP 605
L P P+VRN P P R+ G P P +T + RHLG R P+P
Sbjct: 134 LLPPPPLVRN----EPQPGRYTAGLPPPPPPPVTGGAFRRYARHLGPRRAPKP 182
>09_02_0305 - 7122320-7122436,7122781-7122787,7122833-7123023
Length = 104
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +1
Query: 520 PLRCHTRLLQRRPSSLCAATWGRRGIRSRNSSYHRRVPLLLSDRISAARYPARLLRRV 693
P++ H L R S + TW + I++ +S+ +++V L AARYP +L RV
Sbjct: 18 PVQVH--LPTRSEPSSSSTTWSIKIIQASSSAAYQKVSDRLISNEYAARYPEQLSTRV 73
>07_03_1614 +
28152812-28153204,28153301-28153585,28153676-28153993,
28154657-28154884,28155390-28155490,28156204-28156321,
28156445-28156726
Length = 574
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 564 ALRRHLGSPRHPQPQFELPSPCSTTTIRPNQRCKV 668
AL LG H +P FE P P S +T+ P ++ V
Sbjct: 506 ALGYPLGCSNHMEPAFEPPDPSSFSTVFPYEKGSV 540
>04_04_0260 +
23996775-23996865,23997031-23997566,23998407-23998892,
23998989-23999152,23999220-23999281,23999753-23999907,
24000625-24000738,24001701-24002233,24002512-24002609,
24003108-24003398,24003764-24003830,24003905-24003983
Length = 891
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/46 (43%), Positives = 23/46 (50%)
Frame = +3
Query: 468 PVVRNADFTRPAPRRHGSSSLPHPSLTASSKLALRRHLGSPRHPQP 605
P NA+ R P+ SS P L+ S LA RHL SPR P P
Sbjct: 569 PFFPNAERRRRQPKTPPSSP---PGLSVSPNLA--RHLSSPRPPPP 609
>10_01_0274 - 2901033-2901778,2902475-2902634
Length = 301
Score = 29.1 bits (62), Expect = 4.7
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 3/79 (3%)
Frame = +3
Query: 453 LQPVSPVVRNADFTRPAPRRH---GSSSLPHPSLTASSKLALRRHLGSPRHPQPQFELPS 623
++P+S F A + H +SS P S A RRH R P P+++ P
Sbjct: 117 IEPLSSEGETGTFVAVAGKTHLPSSTSSSPECSSVAICFPCHRRHRMFHRKPMPEYQPPP 176
Query: 624 PCSTTTIRPNQRCKVSSSP 680
T P C S+P
Sbjct: 177 SPVYGTPAPGCSCSPPSTP 195
>02_05_0589 - 30176354-30176829,30176895-30177075
Length = 218
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = +3
Query: 495 RPAPRRHGSSSLPHPSLTASSKLALRRHLGSPRHPQPQFELPSPCSTTTIRPNQRCKVSS 674
R P G + P P T ++ R +G+PR P +P S + RP+ R S
Sbjct: 123 RVRPAAPGPAQAPAPGPTRAALTLRRPPIGAPR-PAAVTAAFTPTSPSASRPSARTSPSP 181
Query: 675 SP 680
SP
Sbjct: 182 SP 183
>02_05_0008 +
24934917-24935229,24936387-24936608,24936876-24937591,
24937646-24937728,24938448-24938514,24938833-24939228,
24939276-24939318,24939380-24939474,24940287-24940314,
24940636-24940754
Length = 693
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 258 GGKLARPTRFLQATRSQNYIESVRHQSSGD 347
GG L P+R+L +NY++ V S+ D
Sbjct: 624 GGSLVGPSRYLLQEAGRNYVDEVEDSSTAD 653
>07_03_1204 +
24855052-24855210,24855411-24855974,24856157-24856225,
24856304-24856426,24856733-24856864,24857143-24857266,
24857547-24857614,24857849-24857991,24858615-24858722,
24858826-24858901,24859442-24859578,24859660-24859819,
24859901-24860080,24860159-24860275,24860540-24860695,
24861209-24861379,24861479-24861591,24861669-24861792,
24861961-24862056,24862139-24862201,24862299-24862364
Length = 982
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 487 ISLDQHHAVTDPLRCHTRLLQRRPSSLCAATWG 585
I +D+ H+ CHT L+ RR +C+ +G
Sbjct: 361 IVIDEAHSYKGAFGCHTALILRRLKRICSNIYG 393
>03_01_0161 +
1307206-1307769,1307979-1308101,1308182-1308286,
1308688-1308867,1308988-1309050,1309151-1309345,
1309704-1309805,1309885-1309947,1310045-1310113,
1310215-1310270,1310587-1310755
Length = 562
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = +3
Query: 519 SSSLPHPSLTASSKLALR---RHLGSPRHPQPQFELPSPCSTT 638
SS P P+ T SS+LA R + HP P P+P S T
Sbjct: 6 SSKPPTPASTPSSRLAAAPSSRVSSAAPHPSPSSSAPTPASRT 48
>01_01_0829 +
6471032-6471870,6472490-6472685,6472772-6472956,
6473206-6473539,6473629-6473833,6474927-6475033,
6475117-6475269
Length = 672
Score = 28.7 bits (61), Expect = 6.3
Identities = 28/83 (33%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Frame = +3
Query: 453 LQPVSPVVRNADFTRPAPRRHGSSSLPHPSLTASSKLALRRHLGSPRHPQPQFELPSPCS 632
L PVSP+ ++ P P SSS SL+ S A L S R + LPS
Sbjct: 37 LSPVSPLTHSSSSKLPTP---SSSSGSSGSLSVSR--APASALASRRSHSGEIPLPSDGP 91
Query: 633 TTTIRPNQRCKVSSSPI--TSCT 695
RP R + S P+ TSC+
Sbjct: 92 PRGSRPGHR-RTGSGPLIFTSCS 113
>11_02_0135 + 8683470-8683833,8686321-8686601
Length = 214
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 4/22 (18%)
Frame = -1
Query: 545 KRRVWQRR----GSVTAWCWSS 492
+RR W+RR G V AWCW S
Sbjct: 4 QRRRWRRRRGGRGEVDAWCWRS 25
>05_01_0326 -
2558237-2558344,2558605-2558706,2558867-2558944,
2559024-2559089,2559885-2559975,2560414-2560490,
2560905-2561114,2561202-2561319,2561824-2561921,
2562037-2562102,2562189-2562351,2563542-2563674,
2563760-2563793
Length = 447
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 511 VTDPLRCHTRLLQRRPSSLCAATWGRRGIRSRNSSYHRR 627
+++ L RL S++ AA GRRG+ + Y+RR
Sbjct: 4 LSNSLLLQGRLRHAAASAVAAAAMGRRGVATSTEEYNRR 42
>01_06_1179 - 35161229-35162368
Length = 379
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +3
Query: 495 RPAPR--RHGSSSLPHPSLTASSKLALRRHLGSPRHPQ 602
RP P RHG+ SLPH + + A +GSP HP+
Sbjct: 58 RPLPNTPRHGALSLPHRASYYYTPRAGDLLVGSPLHPK 95
>10_08_0112 + 14893108-14893212,14894249-14894296
Length = 50
Score = 23.8 bits (49), Expect(2) = 9.7
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -2
Query: 619 GSSNCGCGCR 590
G CGCGCR
Sbjct: 19 GGCGCGCGCR 28
Score = 23.0 bits (47), Expect(2) = 9.7
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -2
Query: 625 GDGSSNCGCGC 593
G S CGCGC
Sbjct: 15 GAASGGCGCGC 25
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,637,949
Number of Sequences: 37544
Number of extensions: 450249
Number of successful extensions: 1805
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1803
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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