Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_P21
         (857 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical pr...    28   1.4  
Z70718-7|CAA94671.1|  289|Caenorhabditis elegans Hypothetical pr...    30   1.8  
U50072-5|AAA93452.2|  351|Caenorhabditis elegans Pax (paired box...    30   1.8  
AF002702-1|AAC27976.1|  289|Caenorhabditis elegans PAX protein p...    30   1.8  
AC024755-2|AAL65800.1|  498|Caenorhabditis elegans Hypothetical ...    30   2.4  
Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical p...    29   4.2  
AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical...    29   4.2  
U40059-1|AAA81138.3|  867|Caenorhabditis elegans Hypothetical pr...    29   5.6  
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ...    29   5.6  
AC006620-1|AAF39780.1|  754|Caenorhabditis elegans Hypothetical ...    29   5.6  

>Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical
           protein R13H4.8 protein.
          Length = 212

 Score = 27.9 bits (59), Expect(2) = 1.4
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -2

Query: 676 ELDTLQR*FGRIVVVEHGDGSSNCGCGC 593
           ++DTL    GR+     G G   CGCGC
Sbjct: 59  DIDTLGESNGRVKRQGGGCGCCGCGCGC 86



 Score = 21.4 bits (43), Expect(2) = 1.4
 Identities = 10/18 (55%), Positives = 11/18 (61%), Gaps = 1/18 (5%)
 Frame = -2

Query: 607 CGCGCRG-DPRWRRRASL 557
           CGCGC G     R+R SL
Sbjct: 127 CGCGCCGCGGGGRKRRSL 144


>Z70718-7|CAA94671.1|  289|Caenorhabditis elegans Hypothetical
           protein C04G2.7 protein.
          Length = 289

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 25/72 (34%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
 Frame = +3

Query: 150 HGTVDAHVSGTSSDGDGREGSTRGGD---ITPSAVPCVDGGKLARPTRFLQATRSQNYIE 320
           HG V   +    S G  R G   G      TP  V C+ G K A PT F    R Q  IE
Sbjct: 75  HGCVSKILGRYYSTGSVRPGVIGGSKPKVATPRVVECIAGYKRANPTMFAWEIR-QKLIE 133

Query: 321 SVRHQSSGDESI 356
               Q  G+E++
Sbjct: 134 D---QICGEENV 142


>U50072-5|AAA93452.2|  351|Caenorhabditis elegans Pax (paired box)
           transcriptionfactor protein 2 protein.
          Length = 351

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 25/72 (34%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
 Frame = +3

Query: 150 HGTVDAHVSGTSSDGDGREGSTRGGD---ITPSAVPCVDGGKLARPTRFLQATRSQNYIE 320
           HG V   +    S G  R G   G      TP  V C+ G K A PT F    R Q  IE
Sbjct: 137 HGCVSKILGRYYSTGSVRPGVIGGSKPKVATPRVVECIAGYKRANPTMFAWEIR-QKLIE 195

Query: 321 SVRHQSSGDESI 356
               Q  G+E++
Sbjct: 196 D---QICGEENV 204


>AF002702-1|AAC27976.1|  289|Caenorhabditis elegans PAX protein
           protein.
          Length = 289

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 25/72 (34%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
 Frame = +3

Query: 150 HGTVDAHVSGTSSDGDGREGSTRGGD---ITPSAVPCVDGGKLARPTRFLQATRSQNYIE 320
           HG V   +    S G  R G   G      TP  V C+ G K A PT F    R Q  IE
Sbjct: 75  HGCVSKILGRYYSTGSVRPGVIGGSKPKVATPRVVECIAGYKRANPTMFAWEIR-QKLIE 133

Query: 321 SVRHQSSGDESI 356
               Q  G+E++
Sbjct: 134 D---QICGEENV 142


>AC024755-2|AAL65800.1|  498|Caenorhabditis elegans Hypothetical
           protein Y34B4A.10 protein.
          Length = 498

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 19/78 (24%), Positives = 29/78 (37%)
 Frame = +3

Query: 450 SLQPVSPVVRNADFTRPAPRRHGSSSLPHPSLTASSKLALRRHLGSPRHPQPQFELPSPC 629
           S+ P SP V         P    +S  P P    S    L  H    R       + +P 
Sbjct: 155 SVAPTSPEVPVTTSESTTPEHAITSEAPEPISEVSKATPLEHHYAEERVYPTMGSVQAPI 214

Query: 630 STTTIRPNQRCKVSSSPI 683
               + P+Q+ +V+S+ I
Sbjct: 215 EFVEVLPSQQTEVASTSI 232


>Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical
            protein H38K22.1 protein.
          Length = 1570

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = -1

Query: 461  RLQAEAAESPASTHRLAFFFVVCSPKSAGANNEVVNRFVARRLMTNRFDIVLRPGRLQKT 282
            +LQ E  E+  +   L FF+V CSPK     + V    V      NR   + +PGR+   
Sbjct: 1205 KLQMEDQEAKEAGFNLQFFYV-CSPKDKADPSNVYAPDVLINDEKNRNGRIPKPGRVFHV 1263

Query: 281  S-RASEF 264
            S   SEF
Sbjct: 1264 SDLTSEF 1270


>AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical
            protein H38K22.1 protein.
          Length = 1570

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = -1

Query: 461  RLQAEAAESPASTHRLAFFFVVCSPKSAGANNEVVNRFVARRLMTNRFDIVLRPGRLQKT 282
            +LQ E  E+  +   L FF+V CSPK     + V    V      NR   + +PGR+   
Sbjct: 1205 KLQMEDQEAKEAGFNLQFFYV-CSPKDKADPSNVYAPDVLINDEKNRNGRIPKPGRVFHV 1263

Query: 281  S-RASEF 264
            S   SEF
Sbjct: 1264 SDLTSEF 1270


>U40059-1|AAA81138.3|  867|Caenorhabditis elegans Hypothetical
           protein K03C7.1 protein.
          Length = 867

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 6/62 (9%)
 Frame = +3

Query: 483 ADFTRPAPRRHGSSSL------PHPSLTASSKLALRRHLGSPRHPQPQFELPSPCSTTTI 644
           ADFT PAP++  +  L      P P+     K         P  P+  + +P+P    T 
Sbjct: 156 ADFTMPAPKKPDTEDLADPPEPPKPAAPKKWKPPWEEDPDEPEEPEADYTMPAPKKPDTE 215

Query: 645 RP 650
            P
Sbjct: 216 DP 217


>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
            protein Y79H2A.3a protein.
          Length = 2129

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
 Frame = +3

Query: 342  GDESIDYFIVGARALRRAYDEEKRQSVXXXXXXXXXSLQPVSPVVRNA-DFTRPAP-RRH 515
            GDE+I+ FI+  R          +QS+          L PVS     A  + +P P + +
Sbjct: 1713 GDEAINKFIMDMRTKETHQATMPKQSISQSISSMGIQLTPVSGQYTQAPQYQQPPPMQSY 1772

Query: 516  GSSSLPHPSLTASS 557
            G SS P P   A++
Sbjct: 1773 GISSGPPPPPPAAA 1786


>AC006620-1|AAF39780.1|  754|Caenorhabditis elegans Hypothetical
           protein C51G7.3 protein.
          Length = 754

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
 Frame = +3

Query: 342 GDESIDYFIVGARALRRAYDEEKRQSVXXXXXXXXXSLQPVSPVVRNA-DFTRPAP-RRH 515
           GDE+I+ FI+  R          +QS+          L PVS     A  + +P P + +
Sbjct: 338 GDEAINKFIMDMRTKETHQATMPKQSISQSISSMGIQLTPVSGQYTQAPQYQQPPPMQSY 397

Query: 516 GSSSLPHPSLTASS 557
           G SS P P   A++
Sbjct: 398 GISSGPPPPPPAAA 411


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,343,509
Number of Sequences: 27780
Number of extensions: 341104
Number of successful extensions: 1260
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1258
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)