Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_P19
(847 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar... 288 6e-79
SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc... 203 3e-53
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 201 1e-52
SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha... 182 6e-47
SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosacch... 159 6e-40
SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomy... 134 2e-32
SPAC1006.07 |||translation initiation factor eIF4A|Schizosacchar... 132 8e-32
SPBC776.09 |ste13||ATP-dependent RNA helicase Ste13|Schizosaccha... 125 9e-30
SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A related|Schizosa... 124 2e-29
SPAC17G6.14c |uap56||ATP-dependent RNA helicase Uap56|Schizosacc... 117 2e-27
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 116 6e-27
SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 113 2e-26
SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc... 111 1e-25
SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomy... 101 2e-22
SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8 |Schizosaccha... 100 5e-22
SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosacch... 97 4e-21
SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116 |S... 92 1e-19
SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomy... 81 3e-16
SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy... 76 7e-15
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 72 1e-13
SPCC1494.06c |||ATP-dependent RNA helicase Dbp9 |Schizosaccharom... 68 2e-12
SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomy... 65 1e-11
SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyce... 49 7e-07
SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|ch... 44 3e-05
SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1 |Schizosaccharom... 43 6e-05
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 41 2e-04
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 41 2e-04
SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|... 39 0.001
SPCC417.09c |||transcription factor |Schizosaccharomyces pombe|c... 35 0.013
SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase |Schizosa... 35 0.017
SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase Prp16|... 31 0.27
SPAC10F6.02c |prp22||ATP-dependent RNA helicase Prp22|Schizosacc... 30 0.36
SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1 |Schizos... 27 2.5
SPAC20H4.09 |||ATP-dependent RNA helicase, spliceosomal |Schizos... 27 3.3
SPBC16H5.10c |prp43||ATP-dependent RNA helicase Prp43|Schizosacc... 27 4.4
SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1 |Schizosaccharo... 27 4.4
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch... 26 5.8
SPBC28E12.05 |esf2|SPBC3H7.17c|U3 snoRNP-associated protein Esf2... 26 7.7
>SPBP8B7.16c |dbp2||ATP-dependent RNA helicase
Dbp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 288 bits (707), Expect = 6e-79
Identities = 133/225 (59%), Positives = 177/225 (78%)
Frame = +1
Query: 19 FGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQ 198
+GG P+ Q RDL RGVEI IATPGRL+D L+ TNL+R TYLVLDEADRMLDMGFEPQ
Sbjct: 230 YGGVPRGPQIRDLIRGVEICIATPGRLLDMLDSNKTNLRRVTYLVLDEADRMLDMGFEPQ 289
Query: 199 IRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQ 378
IRKI++QIRPDRQT+M+SATWPKEV++LA DYL DYIQ+ +GSL L+A+HNI QIV++
Sbjct: 290 IRKIVDQIRPDRQTVMFSATWPKEVQRLARDYLNDYIQVTVGSLDLAASHNIKQIVEVVD 349
Query: 379 EHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQE 558
+K +L ++E+ + ++ K +IF TKR A++I+R +R+ GWPA+ +HGDK Q E
Sbjct: 350 NADKRARLGKDIEEVLKDRD--NKVLIFTGTKRVADDITRFLRQDGWPALAIHGDKAQDE 407
Query: 559 RDEVLYQFKEGRASILVATDVAARGLDVDGIXYVINFDYPNXSED 693
RD VL +F+ G++ I+VATDVA+RG+DV GI +V N+D+P +ED
Sbjct: 408 RDWVLNEFRTGKSPIMVATDVASRGIDVKGITHVFNYDFPGNTED 452
>SPCC10H11.01 |prp11||ATP-dependent RNA helicase
Prp11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1014
Score = 203 bits (495), Expect = 3e-53
Identities = 102/233 (43%), Positives = 151/233 (64%), Gaps = 5/233 (2%)
Frame = +1
Query: 10 RVC--FGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADRM 174
R C +GGAP ++Q DL+RG EIV+ TPGR+ID L TNL RCTYLVLDEADRM
Sbjct: 521 RACCAYGGAPIKDQIADLKRGAEIVVCTPGRMIDVLSANAGRVTNLHRCTYLVLDEADRM 580
Query: 175 LDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNI 354
D+GFEPQ+ +II IRPDRQT+++SAT+P+ ++ LA L ++I +G + A+ +
Sbjct: 581 FDLGFEPQVMRIINNIRPDRQTVLFSATFPRAMEALARKVLKKPVEITVGGRSVVAS-EV 639
Query: 355 LQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCM 534
QIV++ E K ++L LL E+ +Q +T++FV+ + A+ + ++ + G+ + +
Sbjct: 640 EQIVEVRPEESKFSRLLELLGELYNNQ-LDVRTLVFVDRQESADALLSDLMKRGYTSNSI 698
Query: 535 HGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIXYVINFDYPNXSED 693
HG K Q +RD + +K G +L+AT V ARGLDV + V+N+D PN ED
Sbjct: 699 HGGKDQHDRDSTISDYKAGVFDVLIATSVVARGLDVKSLQLVVNYDCPNHMED 751
>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
Sum3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 201 bits (490), Expect = 1e-52
Identities = 102/229 (44%), Positives = 153/229 (66%), Gaps = 4/229 (1%)
Frame = +1
Query: 19 FGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQ 198
+GGA R Q R +++G +++ ATPGRL+D +++G +L +LVLDEADRMLDMGFEPQ
Sbjct: 290 YGGADIRAQIRQIDQGCDLLSATPGRLVDLIDRGRISLANIKFLVLDEADRMLDMGFEPQ 349
Query: 199 IRKIIEQIR----PDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIV 366
IR I+E +RQTLM+SAT+P++++ LA D+L DY+ +++G + S + NI Q V
Sbjct: 350 IRHIVEGADMTSVEERQTLMFSATFPRDIQLLARDFLKDYVFLSVGRVG-STSENITQKV 408
Query: 367 DICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDK 546
++ EK + L +L + P T+IFVETKR A+ ++ + +PA +HGD+
Sbjct: 409 VHVEDSEKRSYLLDILHTL----PPEGLTLIFVETKRMADTLTDYLLNSNFPATSIHGDR 464
Query: 547 TQQERDEVLYQFKEGRASILVATDVAARGLDVDGIXYVINFDYPNXSED 693
TQ+ER+ L F+ GR SI+VAT VA+RGLD+ + +VIN+D P +D
Sbjct: 465 TQRERERALELFRSGRTSIMVATAVASRGLDIPNVTHVINYDLPTDIDD 513
>SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 578
Score = 182 bits (443), Expect = 6e-47
Identities = 105/234 (44%), Positives = 143/234 (61%), Gaps = 7/234 (2%)
Frame = +1
Query: 13 VCFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 192
V +GGAPK EQAR + ++I TPGRL+D + G+ + + YLVLDEADRMLD GFE
Sbjct: 269 VVYGGAPKSEQAR-AAKNASVIIGTPGRLLDLINDGSIDCSQVGYLVLDEADRMLDTGFE 327
Query: 193 PQIRKIIEQIRPD------RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNI 354
IR II PD RQT+ +SATWP+ V+ LA +L D ++I IGS +L+A+ NI
Sbjct: 328 QDIRNIISH-TPDPTRNGSRQTVFFSATWPESVRALAATFLKDPVKITIGSDELAASQNI 386
Query: 355 LQIVDICQE-HEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVC 531
QIV+I + KE L+ LL++ S K +IFV K++A + + R + V
Sbjct: 387 TQIVEILDDPRSKERMLDNLLRKHLSSGGKDDKILIFVLYKKEAARVEGTLAR-KYNVVG 445
Query: 532 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIXYVINFDYPNXSED 693
+HGD +Q R + L FK G+ +LVATDVAARGLD+ + VIN +P ED
Sbjct: 446 IHGDMSQGARLQALNDFKSGKCPVLVATDVAARGLDIPKVQLVINVTFPLTIED 499
>SPCC63.11 |prp28||U5 snRNP-associated protein Prp28
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 159 bits (385), Expect = 6e-40
Identities = 90/249 (36%), Positives = 140/249 (56%), Gaps = 19/249 (7%)
Frame = +1
Query: 22 GGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQI 201
GG EQ+ + +G IV+ATPGRL+D LE+ L +CTY+V+DEADRMLDMGFE +
Sbjct: 361 GGHAFEEQSFQMSQGAHIVVATPGRLLDCLERRLFVLSQCTYVVMDEADRMLDMGFEDDV 420
Query: 202 RKIIEQIRPD-------------------RQTLMWSATWPKEVKKLAEDYLGDYIQINIG 324
KI+ + RQT+M+SAT P V LA+ YL + + + IG
Sbjct: 421 NKILSSLPSSNASEKDGSILATANSSSSRRQTIMFSATLPPRVANLAKSYLIEPVMLTIG 480
Query: 325 SLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNI 504
++ + + + Q V++ + K+ + ++EI +S IIFV KR E I++ +
Sbjct: 481 NIGQAVDR-VEQRVEMISDDSKKWRR---VEEILESNRFSPPIIIFVNLKRNIEAIAKQL 536
Query: 505 RRYGWPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIXYVINFDYPNX 684
GW AV +HG K+Q++R+ + Q + A ILVATD+A RG+D+ + V+N++
Sbjct: 537 NAIGWHAVTLHGSKSQEQRERAIEQLRNKTADILVATDIAGRGIDIPNVSLVLNYNMAKS 596
Query: 685 SEDXSIVLG 711
ED + +G
Sbjct: 597 IEDYTHRIG 605
>SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 465
Score = 134 bits (323), Expect = 2e-32
Identities = 85/228 (37%), Positives = 126/228 (55%), Gaps = 2/228 (0%)
Frame = +1
Query: 13 VCFGGAPKREQARDLERGVEIVIATPGRLIDFLE--KGTTNLQRCTYLVLDEADRMLDMG 186
V GG QA L + +++ TPGRL+D LE KG + L+ YL++DEADR+LDM
Sbjct: 147 VIVGGMDMVTQAVALSKKPHVLVCTPGRLMDHLENTKGFS-LKNLKYLIMDEADRLLDMD 205
Query: 187 FEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIV 366
F P I KI++ I +R+TL++SAT +V+KL L +++ + S + S ++Q
Sbjct: 206 FGPIIDKILKIIPHERRTLLFSATMTSKVEKLQRASLHQPVRVAVSS-KFSTVDTLIQRY 264
Query: 367 DICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDK 546
K+ L L+ E+ G IIF T + ++ +R G+ A+ +HG
Sbjct: 265 LFFPFKHKDTYLVYLVNELA-----GNSIIIFARTVNDTQRLAILLRTLGFSAIPLHGQL 319
Query: 547 TQQERDEVLYQFKEGRASILVATDVAARGLDVDGIXYVINFDYPNXSE 690
+Q R L +FK G S LVATDVAARGLD+ + VIN+D P S+
Sbjct: 320 SQSNRLGALNKFKSGARSTLVATDVAARGLDIPLVDVVINYDIPTDSK 367
>SPAC1006.07 |||translation initiation factor
eIF4A|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 132 bits (318), Expect = 8e-32
Identities = 72/226 (31%), Positives = 121/226 (53%)
Frame = +1
Query: 16 CFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 195
C GG R+ L+ GV +V+ TPGR+ D +++ VLDEAD ML GF+
Sbjct: 121 CIGGTLVRDDMAALQAGVHVVVGTPGRVHDMIQRRALPTDAVQMFVLDEADEMLSRGFKD 180
Query: 196 QIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDIC 375
QI I + + P Q ++ SAT P++V ++ ++ D I+I + +L+ V +
Sbjct: 181 QIYDIFQLLPPTAQVVLLSATMPQDVLEVTTKFMRDPIRILVKKDELTLEGIKQFYVAVE 240
Query: 376 QEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQ 555
+E K + L L + + +Q +IF T+RK + ++ + + MHGD Q
Sbjct: 241 KEEWKLDTLCDLYETVTVTQ-----AVIFCNTRRKVDWLTEQLTERDFTVSSMHGDMDQA 295
Query: 556 ERDEVLYQFKEGRASILVATDVAARGLDVDGIXYVINFDYPNXSED 693
+RD ++++F+ G + IL+ TD+ ARG+DV + VIN+D P E+
Sbjct: 296 QRDTLMHEFRTGSSRILITTDLLARGIDVQQVSLVINYDLPANREN 341
>SPBC776.09 |ste13||ATP-dependent RNA helicase
Ste13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 485
Score = 125 bits (301), Expect = 9e-30
Identities = 69/226 (30%), Positives = 112/226 (49%)
Frame = +1
Query: 13 VCFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 192
V GG R+ L V IV+ TPGR++D KG + CT V+DEAD++L F
Sbjct: 145 VTTGGTTLRDDIIRLNDTVHIVVGTPGRVLDLAGKGVADFSECTTFVMDEADKLLSPEFT 204
Query: 193 PQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDI 372
P I +++ +RQ ++SAT+P VK + +L +IN+ + + Q
Sbjct: 205 PIIEQLLSYFPKNRQISLYSATFPLIVKNFMDKHLNKPYEINL--MDELTLRGVTQYYAF 262
Query: 373 CQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQ 552
E +K + LN L ++ +Q +IIF + + E +++ I G+ H Q
Sbjct: 263 VDESQKVHCLNTLFSKLQINQ-----SIIFCNSTNRVELLAKKITELGYSCFYSHAKMLQ 317
Query: 553 QERDEVLYQFKEGRASILVATDVAARGLDVDGIXYVINFDYPNXSE 690
R+ V + F+ G LV +D+ RG+D+ + VINFD+P +E
Sbjct: 318 SHRNRVFHNFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAE 363
>SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A
related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 394
Score = 124 bits (299), Expect = 2e-29
Identities = 65/226 (28%), Positives = 118/226 (52%)
Frame = +1
Query: 16 CFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 195
C GG + L+ G +V TPGR+ D + + + L+LDEAD +L+ GF+
Sbjct: 123 CIGGTSVGNDIKKLDYGQHVVSGTPGRVTDMIRRRNLRTRNVKMLILDEADELLNQGFKE 182
Query: 196 QIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDIC 375
QI I + P Q ++ SAT P++V ++ + + ++I + +L+ + +
Sbjct: 183 QIYDIYRYLPPGTQVVVVSATLPQDVLEMTNKFTTNPVRILVKRDELTLEGLKQYFIAVE 242
Query: 376 QEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQ 555
+E K + L L + +Q +IF ++RK + ++ +R + MHG+ Q+
Sbjct: 243 KEEWKFDTLCDLYDTLTITQ-----AVIFCNSRRKVDWLTEKMREANFTVTSMHGEMPQK 297
Query: 556 ERDEVLYQFKEGRASILVATDVAARGLDVDGIXYVINFDYPNXSED 693
ERD ++ F++G + +L+ TD+ ARG+DV + VIN+D P E+
Sbjct: 298 ERDAIMQDFRQGNSRVLICTDIWARGIDVQQVSLVINYDLPANREN 343
>SPAC17G6.14c |uap56||ATP-dependent RNA helicase
Uap56|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 117 bits (281), Expect = 2e-27
Identities = 67/229 (29%), Positives = 120/229 (52%), Gaps = 4/229 (1%)
Frame = +1
Query: 7 TRVCFGGAPKR---EQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 177
T V +GG + E +D + IV+ATPGRL + + + + VLDE D++L
Sbjct: 151 TAVFYGGINIKQDMEAFKDKSKSPHIVVATPGRLNALVREKILKVNSVKHFVLDECDKLL 210
Query: 178 D-MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNI 354
+ + I+++ P +Q +M+SAT E++ + + ++ + ++I + H +
Sbjct: 211 ESVDMRRDIQEVFRATPPQKQVMMFSATLSNEIRPICKKFMQNPLEIYVDDETKLTLHGL 270
Query: 355 LQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCM 534
Q +E K K+N LL + +Q +IFV++ +A + R +R +P++C+
Sbjct: 271 QQHYVKLEEKAKNRKINDLLDSLEFNQ-----VVIFVKSVSRANELDRLLRECNFPSICI 325
Query: 535 HGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIXYVINFDYPN 681
HG Q+ER + FK+ I VATDV RG+D++ + VIN+D P+
Sbjct: 326 HGGLPQEERIKRYKAFKDFDKRICVATDVFGRGIDIERVNIVINYDMPD 374
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 116 bits (278), Expect = 6e-27
Identities = 72/229 (31%), Positives = 122/229 (53%), Gaps = 3/229 (1%)
Frame = +1
Query: 13 VCFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTT-NLQRCTYLVLDEADRMLDMGF 189
+C GG + Q ++L + +IVIATPGR ID + ++ +V+DEADRML+ GF
Sbjct: 363 LCIGGLSLKLQEQELRKRPDIVIATPGRFIDHMRNSQGFTVENIEIMVMDEADRMLEDGF 422
Query: 190 EPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVD 369
++ +II+ RQT+++SAT +V L L +++ + + + +A + V
Sbjct: 423 ADELNEIIQACPKSRQTMLFSATMTDKVDDLIRLSLNRPVRVFVDNKKTTAKLLTQEFVR 482
Query: 370 ICQEHE--KENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGD 543
+ + E + L L +E+ +TIIF +K A + A +HG
Sbjct: 483 VRPQRELLRPAMLIYLCKELFHR-----RTIIFFRSKAFAHKMRVIFGLLSLNATEIHGS 537
Query: 544 KTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIXYVINFDYPNXSE 690
+Q++R L F++G+ + L+ATDVA+RG+D+ GI VIN++ P E
Sbjct: 538 LSQEQRVRALEDFRDGKCNYLLATDVASRGIDIKGIEVVINYEAPATHE 586
>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 113 bits (273), Expect = 2e-26
Identities = 70/231 (30%), Positives = 132/231 (57%), Gaps = 4/231 (1%)
Frame = +1
Query: 13 VCFGGAPKREQARDLERGVEIVIATPGRLIDFLE--KGTTNLQRCTYLVLDEADRMLDMG 186
+ GGA +R +A L +GV +++ATPGRL+D L+ KG + LV+DEADR+L++G
Sbjct: 194 IVIGGANRRAEADKLVKGVNLLVATPGRLLDHLQNTKGFV-FRNLRSLVIDEADRILEIG 252
Query: 187 FEPQIRKIIEQIRPD-RQTLMWSATWPKEVKKLAEDYLGDY-IQINIGSLQLSANHNILQ 360
FE ++R+I++ + + RQTL++SAT +V+ LA L + +N+ S + ++ L+
Sbjct: 253 FEDEMRQIMKILPSENRQTLLFSATQTTKVEDLARISLKPGPLYVNVDSGKPTSTVEGLE 312
Query: 361 IVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHG 540
+ + +K + +L + ++ + K I+F+ + + ++ + P + +HG
Sbjct: 313 QGYVVVDSDK--RFLLLFSFLKRNLKK--KVIVFMSSCASVKYMAELLNYIDLPVLDLHG 368
Query: 541 DKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIXYVINFDYPNXSED 693
+ QQ R ++F IL+ T+VAARGLD+ + +++ +D P+ D
Sbjct: 369 KQKQQRRTNTFFEFCNAEKGILLCTNVAARGLDIPAVDWIVQYDPPDDPRD 419
>SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 503
Score = 111 bits (267), Expect = 1e-25
Identities = 68/204 (33%), Positives = 114/204 (55%), Gaps = 1/204 (0%)
Frame = +1
Query: 70 EIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDM-GFEPQIRKIIEQIRPDRQTLM 246
+IVI TPG ++D +++ + + VLDEAD MLD G Q +I + + Q ++
Sbjct: 232 QIVIGTPGTVMDLMKRRQLDARDIKVFVLDEADNMLDQQGLGDQSMRIKHLLPRNTQIVL 291
Query: 247 WSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIG 426
+SAT+ + V+K AE + + +I + + +LS I Q+ CQ +E+K NVL++ G
Sbjct: 292 FSATFSERVEKYAERFAPNANEIRLKTEELSVE-GIKQLYMDCQS--EEHKYNVLVELYG 348
Query: 427 QSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRASIL 606
++IIF + K AE I+R + G C+ G+ +RD ++ F+ G + +L
Sbjct: 349 LLTI--GQSIIFCKKKDTAEEIARRMTADGHTVACLTGNLEGAQRDAIMDSFRVGTSKVL 406
Query: 607 VATDVAARGLDVDGIXYVINFDYP 678
V T+V ARG+DV + V+N+D P
Sbjct: 407 VTTNVIARGIDVSQVNLVVNYDMP 430
>SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 735
Score = 101 bits (241), Expect = 2e-22
Identities = 73/224 (32%), Positives = 112/224 (50%), Gaps = 5/224 (2%)
Frame = +1
Query: 22 GGAPKREQARDLERGVEIVIATPGRLIDFLEKGTT-NLQRCTYLVLDEADRMLDMGFEPQ 198
GG +E+ L R + I++ TPGRL+ +++ + L+LDEADR+LDMGF
Sbjct: 147 GGNNYKEEKERLSR-MNILVCTPGRLLQHIDQAVNFDTSGLQMLILDEADRILDMGFRTT 205
Query: 199 IRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYL--GDYIQINIGSLQLSANHNILQIVDI 372
+ I+ + RQT+++SAT K VK LA L D+I ++ S N+ Q
Sbjct: 206 LDAIVSSLPVHRQTMLFSATQTKSVKDLARLSLQNPDFISVHENDTS-STPSNLNQFYLT 264
Query: 373 CQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRY--GWPAVCMHGDK 546
E KL++L I + KTI+F+ + ++ + RR G + +HG +
Sbjct: 265 VPLTE---KLDILFGFIRTHLK--FKTIVFLSSCKQVRFVYETFRRMRPGISLLHLHGKQ 319
Query: 547 TQQERDEVLYQFKEGRASILVATDVAARGLDVDGIXYVINFDYP 678
Q R EV +F R +L TD+ ARGLD + +VI D P
Sbjct: 320 KQTTRTEVTAKFTSSRHVVLFCTDIVARGLDFPAVDWVIQLDAP 363
>SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 453
Score = 99.5 bits (237), Expect = 5e-22
Identities = 76/234 (32%), Positives = 114/234 (48%), Gaps = 10/234 (4%)
Frame = +1
Query: 22 GGAPKREQARDLERGVEIVIATPGRLIDFL----EKGTTNLQRCTYLVLDEADRMLDMGF 189
GG Q+ DL + +V+ATPGRL D + E+ L+R +LV+DEADR+L F
Sbjct: 111 GGMDMIRQSIDLSKRPHVVVATPGRLADLIRSNGEETIAGLRRIKFLVMDEADRLLSPTF 170
Query: 190 EPQIRKIIEQI--RPDRQTLMWSATWPKEVKKLA----EDYLGDYIQINIGSLQLSANHN 351
+ + DRQTL+++AT +++L ++ + + +S
Sbjct: 171 ADDLDDCFSVLPASEDRQTLLFTATVTDAIRQLKYQPQKNNKPPLWLYEVETDNISVPST 230
Query: 352 ILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVC 531
+ Q +E L V L I ++ + A IIFV R AE I +R
Sbjct: 231 LQQSYIFVSSQVREAYL-VHLLTIPENAKKSA--IIFVNRTRTAELIYSILRLLELRVTE 287
Query: 532 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIXYVINFDYPNXSED 693
+H + Q+ER L +F+ A ILVATDVA+RGLD+ + VINFD P +D
Sbjct: 288 LHSEMVQRERINSLGRFRAEAAKILVATDVASRGLDIPSVQLVINFDLPRDPDD 341
>SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 96.7 bits (230), Expect = 4e-21
Identities = 61/215 (28%), Positives = 115/215 (53%), Gaps = 1/215 (0%)
Frame = +1
Query: 37 REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIE 216
+E+A L ++ I TP RL+ ++ G + ++ + V+DEADR+ + GF Q I+
Sbjct: 157 QEKAPKLREKYDMCIGTPMRLVQAIQTGLS-FEKVEFFVMDEADRLFEPGFIEQTDHILS 215
Query: 217 QIRPDRQTL-MWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKE 393
++SAT P V++LA+ D I+I +G + + +++ + + K
Sbjct: 216 ACTSSNICKSLFSATIPSRVEELAKVVTVDPIRIIVGLKDAATDSIDQRLLFVGSDTSKI 275
Query: 394 NKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 573
V+L+++ + E + +IFV+ +A+ + + +HG+ Q +R+E L
Sbjct: 276 ----VILRQMISNGELKPRVVIFVQDIERAKALYTELLFDEIHVGVIHGELPQAKREEAL 331
Query: 574 YQFKEGRASILVATDVAARGLDVDGIXYVINFDYP 678
+F++G +L+ATD+ ARG+D G+ VINFD+P
Sbjct: 332 AKFRKGEIWVLIATDLLARGIDFHGVKMVINFDFP 366
>SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 91.9 bits (218), Expect = 1e-19
Identities = 68/230 (29%), Positives = 112/230 (48%), Gaps = 6/230 (2%)
Frame = +1
Query: 22 GGAPKREQARDLERG-VEIVIATPGRLIDFLEKGTTNLQRCT-YLVLDEADRMLDMGFEP 195
GG K + + RG ++IATPGRL D L+ T +LDEADR++DMGF
Sbjct: 148 GGNSKMREENAIRRGNANLLIATPGRLEDHLQNPRILESLSTDSFILDEADRLMDMGFAE 207
Query: 196 QIRKIIEQIRPDR-QTLMWSATWPKEVKKLAEDYLG-DYIQIN-IGSLQLSANHNILQIV 366
I I E + + + L +SAT P +V + LG D+ IN + + + + Q V
Sbjct: 208 SILNIHEAVTTTKTRKLCFSATMPPKVSNVFRGILGTDFKLINCLDPNEPPTHERVPQFV 267
Query: 367 DICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRY-GWPAVCMHGD 543
+ + + LLQ++ S P ++ I+F+ T + + + + P +H
Sbjct: 268 IETKLDKVFSSSLSLLQQL-TSSNPSSRIIVFLPTISMVDFVGGVLENHLKIPCFILHSG 326
Query: 544 KTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIXYVINFDYPNXSED 693
T +R + F++ ++ IL ATDV ARG+D I V+ P+ ++D
Sbjct: 327 LTTAQRRSITESFRKCQSGILFATDVVARGMDFPNITQVVQITGPSNTDD 376
>SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 648
Score = 80.6 bits (190), Expect = 3e-16
Identities = 68/250 (27%), Positives = 123/250 (49%), Gaps = 27/250 (10%)
Frame = +1
Query: 22 GGAPKREQARDLERGVEIVIATPGRLIDFLEKG--TTNLQRCTYLVLDEADRMLDMGFEP 195
GG ++Q R L + +V+ATPGRL + + T N ++ LVLDEADR+L
Sbjct: 228 GGLAVQKQQRLLNKHPHVVVATPGRLWSVINENNLTGNFKKIKCLVLDEADRLLQKSHFE 287
Query: 196 QIRKIIE----QIRPDRQTLMWSATWPKEV-KKLAEDYLGDYIQINIGSLQ--------- 333
++ K++E + RQT ++SAT+ + + ++L ++ G+ + ++
Sbjct: 288 ELSKLLEILGNPMHTQRQTFIFSATFDEGLQQRLKKNMKGNITEKYNSPMENMLKEVRFF 347
Query: 334 -----LSAN------HNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRK 480
L AN +L+ + C EK+ L L+ + PG KT++F
Sbjct: 348 GKPKFLDANPQSAVASRVLEGLIECAPAEKDLYLYYLIM-----RYPG-KTMVFANGIED 401
Query: 481 AENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIXYV 660
+ I+ + P+ +H Q++R + L +FK +LV TDVAARG+D+ + +V
Sbjct: 402 IKRITPFLNELKVPSYPLHAQLDQKKRLQSLEKFKNNPKGVLVCTDVAARGIDIPSVTHV 461
Query: 661 INFDYPNXSE 690
I++ P+ ++
Sbjct: 462 IHYHVPHTAD 471
>SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 606
Score = 75.8 bits (178), Expect = 7e-15
Identities = 58/216 (26%), Positives = 107/216 (49%), Gaps = 9/216 (4%)
Frame = +1
Query: 58 ERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQ 237
E+ +VI TPGRL + L ++ + L+LDEAD ++DMGF+ ++ II Q+ R+
Sbjct: 130 EKNPSVVIGTPGRLNEMLSHISS--KHLEILILDEADTLIDMGFQRTLQSIISQLPKQRR 187
Query: 238 TLMWSATWPKEVK---KLAEDYLGDYIQINIGSLQL---SANHNILQIVDICQEHEKENK 399
T ++SAT V K+A + + + S ++ + + +Q + I ++ +
Sbjct: 188 TGLFSATMNDTVSSFLKIAGLRNSVRVSVTVTSKKIDTRTPSSLAIQSLVIPPIYKVQCM 247
Query: 400 LNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWP--AVCMHGDKTQQERDEVL 573
+++L + K I+F + E + Y P V +HG + Q R
Sbjct: 248 IHLLCTIEYE------KAIVFFSSCASVEYFNSLFLTYKLPFEIVALHGQQVQSNRSRNF 301
Query: 574 YQFKE-GRASILVATDVAARGLDVDGIXYVINFDYP 678
+FK+ + ++L TD+A+RGLD+ + +V+ D P
Sbjct: 302 EKFKKSNKKTVLFTTDIASRGLDIPNVDFVLQLDPP 337
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 71.7 bits (168), Expect = 1e-13
Identities = 42/134 (31%), Positives = 70/134 (52%)
Frame = +1
Query: 22 GGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQI 201
GG EQ L +IV+ATPGR + + L Y+V DEADR+ +MGF Q+
Sbjct: 175 GGVSLEEQFSLLSGKPDIVVATPGRFLHLKVEMKLELSSIEYVVFDEADRLFEMGFAAQL 234
Query: 202 RKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 381
+I+ + RQTL++SAT P+ + A+ L D + + + ++ + ++ +
Sbjct: 235 TEILHALPTSRQTLLFSATLPRTLVDFAKAGLQDPVLVRL-DVESKVSADLQSAFFSVKT 293
Query: 382 HEKENKLNVLLQEI 423
E+E L +LQ+I
Sbjct: 294 AEREAALLCILQDI 307
Score = 62.1 bits (144), Expect = 1e-10
Identities = 36/121 (29%), Positives = 67/121 (55%)
Frame = +1
Query: 316 NIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENIS 495
+I L L N +I ++ +++ L + L+ +S P + T++FV TK E +S
Sbjct: 306 DIIKLPLKDNVRPREIGNVNNPKKRKRALELALKG-SESGSPDS-TLVFVPTKHHVEYVS 363
Query: 496 RNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIXYVINFDY 675
+ + G+ ++G Q+ R + F+ G+ ++LV TDVA+RG+D+ + VIN+D+
Sbjct: 364 ELLVQAGYSVSKIYGSLDQEARLNEINNFRLGKTNLLVVTDVASRGIDIPLLANVINYDF 423
Query: 676 P 678
P
Sbjct: 424 P 424
>SPCC1494.06c |||ATP-dependent RNA helicase Dbp9
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 595
Score = 67.7 bits (158), Expect = 2e-12
Identities = 46/200 (23%), Positives = 94/200 (47%)
Frame = +1
Query: 70 EIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMW 249
+IVIATP R + + G L + +LV+DEAD ML G+ ++ + + Q+ +
Sbjct: 142 DIVIATPSRCVVHVASGVLPLDKLKFLVIDEADLMLSFGYNEDMKTLSRSLPRGTQSFLM 201
Query: 250 SATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQ 429
SAT K + L + + + + + A+ + Q V C E +K +LL +
Sbjct: 202 SATLSKNIASLQKLVCRNPFILAVKDKE--ASGKLTQYVVKCSEQDKFLLAYILL----K 255
Query: 430 SQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRASILV 609
+ K +IFV + + + ++G ++ ++ + R +L Q+ +G I++
Sbjct: 256 LRLIKGKILIFVNEINRCYRLKLFLEQFGLKSLVLNSELPVNSRLHILEQYNKGLYQIII 315
Query: 610 ATDVAARGLDVDGIXYVINF 669
ATD + +++ + ++F
Sbjct: 316 ATDESGMMGEIEELENNVDF 335
Score = 27.5 bits (58), Expect = 2.5
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 625 ARGLDVDGIXYVINFDYPNXSE 690
ARGLD + + V+NFD P+ ++
Sbjct: 387 ARGLDFENVACVLNFDMPSNTK 408
>SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 709
Score = 64.9 bits (151), Expect = 1e-11
Identities = 39/112 (34%), Positives = 62/112 (55%), Gaps = 14/112 (12%)
Frame = +1
Query: 22 GGAPKREQARDLERGVEIVIATPGRLIDFLEK-GTTNLQRCTYLVLDEADRMLDMGFEPQ 198
GG K+ + + +GV I+I TPGRL D LE ++ + ++VLDE DR++DMGFE
Sbjct: 255 GGEKKKSEKARIRKGVNILIGTPGRLADHLENTEALDVSQVRWVVLDEGDRLMDMGFEET 314
Query: 199 IRKIIEQIR------------PDRQ-TLMWSATWPKEVKKLAEDYLGDYIQI 315
+ KI+ + P R+ T++ SAT VK+L++ L D + +
Sbjct: 315 LTKILSYLESQSSIIKKDLSIPSRKVTMLCSATMKDTVKRLSDSALKDALYL 366
Score = 44.0 bits (99), Expect = 3e-05
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Frame = +1
Query: 532 MHGDKTQQERDEVLYQFKEGRAS---ILVATDVAARGLDVDGIXYVINFDYPNXSED 693
+HG +QQ R L F S IL+ TDVAARGLD+ + V+ +D P ++D
Sbjct: 473 LHGSLSQQIRTSTLNLFSSSEDSGSHILLCTDVAARGLDLPNVDLVVQYDAPFSTDD 529
>SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 604
Score = 49.2 bits (112), Expect = 7e-07
Identities = 19/53 (35%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = +1
Query: 67 VEIVIATPGRLIDFLEKGTT-NLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI 222
++++++TPGRL+D + + +LQ Y+V+DEADR+LD F+ + ++ +I
Sbjct: 261 IDVLVSTPGRLVDHIRNDESFSLQHLRYMVIDEADRLLDQSFQDWVDTVMMEI 313
Score = 39.9 bits (89), Expect = 4e-04
Identities = 17/44 (38%), Positives = 29/44 (65%)
Frame = +1
Query: 547 TQQERDEVLYQFKEGRASILVATDVAARGLDVDGIXYVINFDYP 678
++ ER +++ +F G ++LV +D+ ARG+DV VIN+D P
Sbjct: 472 SRDERKKIISRFATGDLNLLVCSDLMARGIDVANTQNVINYDPP 515
>SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1374
Score = 44.0 bits (99), Expect = 3e-05
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 12/145 (8%)
Frame = +1
Query: 274 KKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKT 453
++LA D L +++ + + + S N + + D +K KL LL+ + + +T
Sbjct: 307 EELAIDRLKIFVE-DWKNNKYSDNGPRIPVFDSTDVTDKVFKLLELLKATYRKSD-SVRT 364
Query: 454 IIFVETKRKAENISRNIRRYGWPAVCMH-----GDKTQQE-------RDEVLYQFKEGRA 597
+IFVE K A +S ++ P + H G Q E + + L++FK G+
Sbjct: 365 VIFVERKATAFTLSLFMKTLNLPNIRAHSFIGHGPSDQGEFSMTFRRQKDTLHKFKTGKY 424
Query: 598 SILVATDVAARGLDVDGIXYVINFD 672
++L+AT VA G+DV VI F+
Sbjct: 425 NVLIATAVAEEGIDVPSCNLVIRFN 449
>SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 834
Score = 42.7 bits (96), Expect = 6e-05
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 11/108 (10%)
Frame = +1
Query: 382 HEKENKLNVLLQE-IGQSQEPGAKTIIFVETKRKAENISRNIRRY----------GWPAV 528
H K L ++ E + Q + +IFVE + AE I R + ++ G AV
Sbjct: 411 HPKLEHLERIVTEYFEKEQTKDTRIMIFVEIRSSAEEILRFLGKFYPNVRPAIFIGQSAV 470
Query: 529 CMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIXYVINFD 672
+Q+ ++E + QF++G + L+AT + GLD+ + +I +D
Sbjct: 471 RKAAGMSQKLQNETVKQFQKGEVNTLIATSIGEEGLDIGEVDMIICYD 518
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 41.1 bits (92), Expect = 2e-04
Identities = 49/204 (24%), Positives = 90/204 (44%), Gaps = 8/204 (3%)
Frame = +1
Query: 106 FLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTL-MWSATWPKEVKKL 282
F E T L R +V+DEA +L G ++ L + SAT+P++++ +
Sbjct: 1306 FFESLAT-LGRLARVVIDEAHLLLTSGAWRTALSRASRLSGLYAPLHLLSATFPRQLEMV 1364
Query: 283 A-EDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTII 459
A + + ++ + S +A NI + E L L++ + G + II
Sbjct: 1365 ARQTFCTNFYVLRETS---TARENIFYFLHPYDNTEFLLDLRTLMKRTKVFEGDG-RAII 1420
Query: 460 FVETKRKAENISRNIRR---YGWPAVCMH-GDKTQQERDEVLYQFK--EGRASILVATDV 621
F TK+ E I R + + + V ++ GD + +ER F+ G+ I++AT
Sbjct: 1421 FCRTKKDVEYIHRRLHQSDLFAHTHVTIYTGDVSDEERQMNFDAFRNANGKTRIMIATKA 1480
Query: 622 AARGLDVDGIXYVINFDYPNXSED 693
G++ G+ V+++ P S D
Sbjct: 1481 FGLGINYMGVRLVVHYGLPASSMD 1504
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 41.1 bits (92), Expect = 2e-04
Identities = 49/204 (24%), Positives = 90/204 (44%), Gaps = 8/204 (3%)
Frame = +1
Query: 106 FLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTL-MWSATWPKEVKKL 282
F E T L R +V+DEA +L G ++ L + SAT+P++++ +
Sbjct: 1306 FFESLAT-LGRLARVVIDEAHLLLTSGAWRTALSRASRLSGLYAPLHLLSATFPRQLEMV 1364
Query: 283 A-EDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTII 459
A + + ++ + S +A NI + E L L++ + G + II
Sbjct: 1365 ARQTFCTNFYVLRETS---TARENIFYFLHPYDNTEFLLDLRTLMKRTKVFEGDG-RAII 1420
Query: 460 FVETKRKAENISRNIRR---YGWPAVCMH-GDKTQQERDEVLYQFK--EGRASILVATDV 621
F TK+ E I R + + + V ++ GD + +ER F+ G+ I++AT
Sbjct: 1421 FCRTKKDVEYIHRRLHQSDLFAHTHVTIYTGDVSDEERQMNFDAFRNANGKTRIMIATKA 1480
Query: 622 AARGLDVDGIXYVINFDYPNXSED 693
G++ G+ V+++ P S D
Sbjct: 1481 FGLGINYMGVRLVVHYGLPASSMD 1504
>SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase
Rqh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1328
Score = 38.7 bits (86), Expect = 0.001
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +1
Query: 454 IIFVETKRKAENISRNIRR-YGWPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAAR 630
II+ ++ E ++ +R YG A H + ER + +++ G I+VAT
Sbjct: 746 IIYCLSRTSCEQVAAKLRNDYGLKAWHYHAGLEKVERQRIQNEWQSGSYKIIVATIAFGM 805
Query: 631 GLDVDGIXYVINFDYPNXSE 690
G+D + +VI+ +P E
Sbjct: 806 GVDKGDVRFVIHHSFPKSLE 825
>SPCC417.09c |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 767
Score = 35.1 bits (77), Expect = 0.013
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Frame = +1
Query: 16 CFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE- 192
C G P R L++G+E VI TP RL+ ++ + NLQR +++ + M M +
Sbjct: 127 CVGNFPC---GRCLKKGLECVIETPPRLLMNKDEISLNLQRLSHMETILSKLMPSMSLDL 183
Query: 193 PQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQ 333
P + I ++ Q T+P +V L + LG Y Q+ + Q
Sbjct: 184 PSLEAKIAELSESLQ------TYPDKV--LTDIELGSYQQVTLNETQ 222
>SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 34.7 bits (76), Expect = 0.017
Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 13/122 (10%)
Frame = +1
Query: 346 HNILQIVDICQEHEKENKLNVLLQEIGQSQEPG---AKTIIFVETKRKAENISRNIRRY- 513
HN +Q + + H K N L LL+E + G + +IF E + AE I+ +
Sbjct: 438 HNKIQGLSL--NHPKMNHLLELLKEHFKDTSEGYQNQRVMIFTEFRNTAEYITTTLLAIR 495
Query: 514 ---------GWPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIXYVIN 666
G Q ++ E + QF+ G + LVAT + GLD+ +I
Sbjct: 496 PMVRASLFIGQANSAYSTGMNQMQQKETIDQFRAGVINTLVATSIGEEGLDIGDTDMIIC 555
Query: 667 FD 672
+D
Sbjct: 556 YD 557
>SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase
Prp16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 30.7 bits (66), Expect = 0.27
Identities = 43/192 (22%), Positives = 85/192 (44%), Gaps = 9/192 (4%)
Frame = +1
Query: 127 NLQRCTYLVLDEA-DRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGD 303
NL++ + +++DEA +R L+ + K + R D + L+ SAT + K + D+ G
Sbjct: 602 NLEKYSVIIMDEAHERSLNTDILMGLLKKVLSRRRDIKLLVTSATMNSQ--KFS-DFFGG 658
Query: 304 YIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFV----ET 471
Q I + I+ C ++ + VL + Q P ++F+ +
Sbjct: 659 APQFTIPGRTYPVD--IMFAKAPCSDYVEAAVRQVLQIHLSQ---PAGDILVFMTGQEDI 713
Query: 472 KRKAENISRNIRR-YGWPAVCMHGDKTQQERD---EVLYQFKEGRASILVATDVAARGLD 639
+ E I+ + + + P + + +Q D ++ + G ++VAT++A L
Sbjct: 714 EATCEIIADRLNQLHDAPRLSILPIYSQMPADLQAKIFDSAEPGVRKVVVATNIAETSLT 773
Query: 640 VDGIXYVINFDY 675
V GI YV++ Y
Sbjct: 774 VHGISYVVDTGY 785
>SPAC10F6.02c |prp22||ATP-dependent RNA helicase
Prp22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1168
Score = 30.3 bits (65), Expect = 0.36
Identities = 21/112 (18%), Positives = 51/112 (45%)
Frame = +1
Query: 331 QLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRR 510
Q A++ ++ + Q H E ++L+ GQ + + I++ +K ++I +
Sbjct: 697 QPEADYLDAALMTVMQIHLSEGPGDILVFLTGQEEIDTSCEILYERSKMLGDSIPELV-- 754
Query: 511 YGWPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIXYVIN 666
+ ++ + + + G +++AT++A L +DGI YV++
Sbjct: 755 ----ILPVYSALPSEIQSRIFEPAPPGGRKVVIATNIAETSLTIDGIYYVVD 802
>SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1063
Score = 27.5 bits (58), Expect = 2.5
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +1
Query: 547 TQQERDEVLYQFKEGRASILVATDVAARGLDVDGIXYVINFDYP 678
T QER ++ + G+ ++AT+ G+D+ + VI +P
Sbjct: 595 TVQERRKIESEMFNGKLYGIIATNALELGIDIGSLDAVITIGFP 638
>SPAC20H4.09 |||ATP-dependent RNA helicase, spliceosomal
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 647
Score = 27.1 bits (57), Expect = 3.3
Identities = 11/45 (24%), Positives = 23/45 (51%)
Frame = +1
Query: 532 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIXYVIN 666
+H T E+ V + ++ +T++A + +DGI YV++
Sbjct: 275 LHAGLTVDEQMRVFNIYDGDFRKVIFSTNIAETSITIDGIVYVVD 319
>SPBC16H5.10c |prp43||ATP-dependent RNA helicase
Prp43|Schizosaccharomyces pombe|chr 2|||Manual
Length = 735
Score = 26.6 bits (56), Expect = 4.4
Identities = 42/192 (21%), Positives = 81/192 (42%), Gaps = 13/192 (6%)
Frame = +1
Query: 130 LQRCTYLVLDEA-DRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP-KEVKKLAED---- 291
L R + ++LDEA +R L + K + RPD + ++ SAT K+ +K D
Sbjct: 188 LSRYSCIILDEAHERTLATDILMGLMKRLATRRPDLKIIVMSATLDAKKFQKYFFDAPLL 247
Query: 292 -YLGDYIQINIGSLQLSANHNI-LQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFV 465
G + I Q + + + Q H +E ++L+ G+ + A I +
Sbjct: 248 AVPGRTYPVEIYYTQEPERDYLEAALRTVLQIHVEEGPGDILVFLTGEEEIEDACRKITL 307
Query: 466 ETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRAS-----ILVATDVAAR 630
E A+++ R ++G ++ + E S ++++T++A
Sbjct: 308 E----ADDLVREGAAGPLKVYPLYGSLPPNQQQRIFEPTPEDTKSGYGRKVVISTNIAET 363
Query: 631 GLDVDGIXYVIN 666
L +DGI YV++
Sbjct: 364 SLTIDGIVYVVD 375
>SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1183
Score = 26.6 bits (56), Expect = 4.4
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +1
Query: 547 TQQERDEVLYQFKEGRASILVATDVAARGLDVDGIXYVIN 666
T +++ +V EG +VAT+VA + + I YV++
Sbjct: 712 TTEDQMKVFDSSPEGHRMCIVATNVAETSITIPNIRYVVD 751
>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1316
Score = 26.2 bits (55), Expect = 5.8
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -2
Query: 633 PSSCNISCYKNTSTTFLELIQNFISFLLSFIAMHANSWPAIS-PYVP 496
PSS S N+ ++ + I+N+IS +L + +S AI P++P
Sbjct: 254 PSSITSSAKSNSRSSLSQKIRNYISNMLFDAISYTDSCLAIHLPFIP 300
>SPBC28E12.05 |esf2|SPBC3H7.17c|U3 snoRNP-associated protein Esf2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 334
Score = 25.8 bits (54), Expect = 7.7
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 211 IEQIRPDRQTLMWSATWPKEVKKLAED 291
I + R +R TL S +P+E K L+ED
Sbjct: 268 IRKKRSERDTLNVSTEFPEETKDLSED 294
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,048,855
Number of Sequences: 5004
Number of extensions: 59498
Number of successful extensions: 266
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 231
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 418457710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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