Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_P17
(850 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U91326-1|AAC27674.1| 913|Homo sapiens eIF-3 p110 subunit protein. 140 8e-33
U46025-1|AAD03462.1| 913|Homo sapiens translation intiation fac... 140 8e-33
BC107692-1|AAI07693.1| 252|Homo sapiens EIF3C protein protein. 140 8e-33
BC071705-1|AAH71705.1| 913|Homo sapiens eukaryotic translation ... 140 8e-33
BC001571-1|AAH01571.1| 913|Homo sapiens eukaryotic translation ... 140 8e-33
AY762099-1|AAX07826.1| 913|Homo sapiens cell migration-inducing... 140 8e-33
AK000739-1|BAA91352.1| 913|Homo sapiens protein ( Homo sapiens ... 140 8e-33
AC002544-1|AAC27426.1| 913|Homo sapiens Translation initiation ... 140 8e-33
AF111782-1|AAD29948.1| 1938|Homo sapiens myosin heavy chain prot... 35 0.32
>U91326-1|AAC27674.1| 913|Homo sapiens eIF-3 p110 subunit protein.
Length = 913
Score = 140 bits (338), Expect = 8e-33
Identities = 73/164 (44%), Positives = 105/164 (64%), Gaps = 6/164 (3%)
Frame = +2
Query: 170 MSRFFATGTXXXXXXXXXXXPVVRAPA------PVYTFSDDEEETKRVVRSMKEKRYEEL 331
MSRFF TG+ +V P S+DEE+TKRVVRS K+KR+EEL
Sbjct: 1 MSRFFTTGSDSESESSLSGEELVTKPVGGNYGKQPLLLSEDEEDTKRVVRSAKDKRFEEL 60
Query: 332 EGIIHSIRNHRKIKDFSSALASFEELQKAYTRAAPVVQKEENGVAPRFFIRALVELDDWV 511
+I +IRN KI+D + L FE L KAY +A +V KE GV PRF+IR L +L+D++
Sbjct: 61 TNLIRTIRNAMKIRDVTKCLEEFELLGKAYGKAKSIVDKE--GV-PRFYIRILADLEDYL 117
Query: 512 VGAWNEREARKALSKGNSKALTSLRQKLRKYTKDFEAEISKFRE 643
W ++E +K ++K N+KAL++LRQK+RKY +DFE+ I+ +++
Sbjct: 118 NELWEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQ 161
>U46025-1|AAD03462.1| 913|Homo sapiens translation intiation factor
eIF-3 p110 subunit protein.
Length = 913
Score = 140 bits (338), Expect = 8e-33
Identities = 73/164 (44%), Positives = 105/164 (64%), Gaps = 6/164 (3%)
Frame = +2
Query: 170 MSRFFATGTXXXXXXXXXXXPVVRAPA------PVYTFSDDEEETKRVVRSMKEKRYEEL 331
MSRFF TG+ +V P S+DEE+TKRVVRS K+KR+EEL
Sbjct: 1 MSRFFTTGSDSESESSLSGEELVTKPVGGNYGKQPLLLSEDEEDTKRVVRSAKDKRFEEL 60
Query: 332 EGIIHSIRNHRKIKDFSSALASFEELQKAYTRAAPVVQKEENGVAPRFFIRALVELDDWV 511
+I +IRN KI+D + L FE L KAY +A +V KE GV PRF+IR L +L+D++
Sbjct: 61 TNLIRTIRNAMKIRDVTKCLEEFELLGKAYGKAKSIVDKE--GV-PRFYIRILADLEDYL 117
Query: 512 VGAWNEREARKALSKGNSKALTSLRQKLRKYTKDFEAEISKFRE 643
W ++E +K ++K N+KAL++LRQK+RKY +DFE+ I+ +++
Sbjct: 118 NELWEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQ 161
>BC107692-1|AAI07693.1| 252|Homo sapiens EIF3C protein protein.
Length = 252
Score = 140 bits (338), Expect = 8e-33
Identities = 73/164 (44%), Positives = 105/164 (64%), Gaps = 6/164 (3%)
Frame = +2
Query: 170 MSRFFATGTXXXXXXXXXXXPVVRAPA------PVYTFSDDEEETKRVVRSMKEKRYEEL 331
MSRFF TG+ +V P S+DEE+TKRVVRS K+KR+EEL
Sbjct: 1 MSRFFTTGSDSESESSLSGEELVTKPVGGNYGKQPLLLSEDEEDTKRVVRSAKDKRFEEL 60
Query: 332 EGIIHSIRNHRKIKDFSSALASFEELQKAYTRAAPVVQKEENGVAPRFFIRALVELDDWV 511
+I +IRN KI+D + L FE L KAY +A +V KE GV PRF+IR L +L+D++
Sbjct: 61 TNLIRTIRNAMKIRDVTKCLEEFELLGKAYGKAKSIVDKE--GV-PRFYIRILADLEDYL 117
Query: 512 VGAWNEREARKALSKGNSKALTSLRQKLRKYTKDFEAEISKFRE 643
W ++E +K ++K N+KAL++LRQK+RKY +DFE+ I+ +++
Sbjct: 118 NELWEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQ 161
>BC071705-1|AAH71705.1| 913|Homo sapiens eukaryotic translation
initiation factor 3, subunit C protein.
Length = 913
Score = 140 bits (338), Expect = 8e-33
Identities = 73/164 (44%), Positives = 105/164 (64%), Gaps = 6/164 (3%)
Frame = +2
Query: 170 MSRFFATGTXXXXXXXXXXXPVVRAPA------PVYTFSDDEEETKRVVRSMKEKRYEEL 331
MSRFF TG+ +V P S+DEE+TKRVVRS K+KR+EEL
Sbjct: 1 MSRFFTTGSDSESESSLSGEELVTKPVGGNYGKQPLLLSEDEEDTKRVVRSAKDKRFEEL 60
Query: 332 EGIIHSIRNHRKIKDFSSALASFEELQKAYTRAAPVVQKEENGVAPRFFIRALVELDDWV 511
+I +IRN KI+D + L FE L KAY +A +V KE GV PRF+IR L +L+D++
Sbjct: 61 TNLIRTIRNAMKIRDVTKCLEEFELLGKAYGKAKSIVDKE--GV-PRFYIRILADLEDYL 117
Query: 512 VGAWNEREARKALSKGNSKALTSLRQKLRKYTKDFEAEISKFRE 643
W ++E +K ++K N+KAL++LRQK+RKY +DFE+ I+ +++
Sbjct: 118 NELWEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQ 161
>BC001571-1|AAH01571.1| 913|Homo sapiens eukaryotic translation
initiation factor 3, subunit 8, 110kDa protein.
Length = 913
Score = 140 bits (338), Expect = 8e-33
Identities = 73/164 (44%), Positives = 105/164 (64%), Gaps = 6/164 (3%)
Frame = +2
Query: 170 MSRFFATGTXXXXXXXXXXXPVVRAPA------PVYTFSDDEEETKRVVRSMKEKRYEEL 331
MSRFF TG+ +V P S+DEE+TKRVVRS K+KR+EEL
Sbjct: 1 MSRFFTTGSDSESESSLSGEELVTKPVGGNYGKQPLLLSEDEEDTKRVVRSAKDKRFEEL 60
Query: 332 EGIIHSIRNHRKIKDFSSALASFEELQKAYTRAAPVVQKEENGVAPRFFIRALVELDDWV 511
+I +IRN KI+D + L FE L KAY +A +V KE GV PRF+IR L +L+D++
Sbjct: 61 TNLIRTIRNAMKIRDVTKCLEEFELLGKAYGKAKSIVDKE--GV-PRFYIRILADLEDYL 117
Query: 512 VGAWNEREARKALSKGNSKALTSLRQKLRKYTKDFEAEISKFRE 643
W ++E +K ++K N+KAL++LRQK+RKY +DFE+ I+ +++
Sbjct: 118 NELWEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQ 161
>AY762099-1|AAX07826.1| 913|Homo sapiens cell migration-inducing
protein 17 protein.
Length = 913
Score = 140 bits (338), Expect = 8e-33
Identities = 73/164 (44%), Positives = 105/164 (64%), Gaps = 6/164 (3%)
Frame = +2
Query: 170 MSRFFATGTXXXXXXXXXXXPVVRAPA------PVYTFSDDEEETKRVVRSMKEKRYEEL 331
MSRFF TG+ +V P S+DEE+TKRVVRS K+KR+EEL
Sbjct: 1 MSRFFTTGSDSESESSLSGEELVTKPVGGNYGKQPLLLSEDEEDTKRVVRSAKDKRFEEL 60
Query: 332 EGIIHSIRNHRKIKDFSSALASFEELQKAYTRAAPVVQKEENGVAPRFFIRALVELDDWV 511
+I +IRN KI+D + L FE L KAY +A +V KE GV PRF+IR L +L+D++
Sbjct: 61 TNLIRTIRNAMKIRDVTKCLEEFELLGKAYGKAKSIVDKE--GV-PRFYIRILADLEDYL 117
Query: 512 VGAWNEREARKALSKGNSKALTSLRQKLRKYTKDFEAEISKFRE 643
W ++E +K ++K N+KAL++LRQK+RKY +DFE+ I+ +++
Sbjct: 118 NELWEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQ 161
>AK000739-1|BAA91352.1| 913|Homo sapiens protein ( Homo sapiens
cDNA FLJ20732 fis, clone HEP08682. ).
Length = 913
Score = 140 bits (338), Expect = 8e-33
Identities = 73/164 (44%), Positives = 105/164 (64%), Gaps = 6/164 (3%)
Frame = +2
Query: 170 MSRFFATGTXXXXXXXXXXXPVVRAPA------PVYTFSDDEEETKRVVRSMKEKRYEEL 331
MSRFF TG+ +V P S+DEE+TKRVVRS K+KR+EEL
Sbjct: 1 MSRFFTTGSDSESESSLSGEELVTKPVGGNYGKQPLLLSEDEEDTKRVVRSAKDKRFEEL 60
Query: 332 EGIIHSIRNHRKIKDFSSALASFEELQKAYTRAAPVVQKEENGVAPRFFIRALVELDDWV 511
+I +IRN KI+D + L FE L KAY +A +V KE GV PRF+IR L +L+D++
Sbjct: 61 TNLIRTIRNAMKIRDVTKCLEEFELLGKAYGKAKSIVDKE--GV-PRFYIRILADLEDYL 117
Query: 512 VGAWNEREARKALSKGNSKALTSLRQKLRKYTKDFEAEISKFRE 643
W ++E +K ++K N+KAL++LRQK+RKY +DFE+ I+ +++
Sbjct: 118 NELWEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQ 161
>AC002544-1|AAC27426.1| 913|Homo sapiens Translation initiation
factor eIF-p110 protein.
Length = 913
Score = 140 bits (338), Expect = 8e-33
Identities = 73/164 (44%), Positives = 105/164 (64%), Gaps = 6/164 (3%)
Frame = +2
Query: 170 MSRFFATGTXXXXXXXXXXXPVVRAPA------PVYTFSDDEEETKRVVRSMKEKRYEEL 331
MSRFF TG+ +V P S+DEE+TKRVVRS K+KR+EEL
Sbjct: 1 MSRFFTTGSDSESESSLSGEELVTKPVGGNYGKQPLLLSEDEEDTKRVVRSAKDKRFEEL 60
Query: 332 EGIIHSIRNHRKIKDFSSALASFEELQKAYTRAAPVVQKEENGVAPRFFIRALVELDDWV 511
+I +IRN KI+D + L FE L KAY +A +V KE GV PRF+IR L +L+D++
Sbjct: 61 TNLIRTIRNAMKIRDVTKCLEEFELLGKAYGKAKSIVDKE--GV-PRFYIRILADLEDYL 117
Query: 512 VGAWNEREARKALSKGNSKALTSLRQKLRKYTKDFEAEISKFRE 643
W ++E +K ++K N+KAL++LRQK+RKY +DFE+ I+ +++
Sbjct: 118 NELWEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQ 161
>AF111782-1|AAD29948.1| 1938|Homo sapiens myosin heavy chain protein.
Length = 1938
Score = 35.1 bits (77), Expect = 0.32
Identities = 30/132 (22%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Frame = +2
Query: 269 DDEEETKRVVRSMKEKRYE--ELEGII-----HSIRNHRKIKDFSSALASFEELQKAYTR 427
D E E +++ +K+K +E +L+ I HS++ +KIK+ + + EE +A
Sbjct: 1072 DLENEKQQIEEKLKKKEFELSQLQARIDDEQVHSLQFQKKIKELQARIEELEEEIEAEHT 1131
Query: 428 AAPVVQKEENGVAPRFFIRALVELDDWVVGAWNEREARKALSKGNSKALTSLRQKLRKYT 607
++K+ + +A R L E+ + + A A+ ++K +R+ L + T
Sbjct: 1132 LRAKIEKQRSDLA-----RELEEISERLEEASGATSAQIEMNKKREAEFQKMRRDLEEAT 1186
Query: 608 KDFEAEISKFRE 643
EA + R+
Sbjct: 1187 LQHEATAATLRK 1198
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,605,734
Number of Sequences: 237096
Number of extensions: 1667069
Number of successful extensions: 4286
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4277
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10761200974
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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