Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_P13
         (874 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071329-1|AAL48951.1|  210|Drosophila melanogaster RE34924p pro...    31   1.6  
AE013599-1201|AAF58728.1|  210|Drosophila melanogaster CG11979-P...    31   1.6  
AE014298-877|AAF46154.1| 1543|Drosophila melanogaster CG15894-PA...    29   6.3  

>AY071329-1|AAL48951.1|  210|Drosophila melanogaster RE34924p
           protein.
          Length = 210

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
 Frame = +1

Query: 109 IDSARHKQIPKHHDYVLNE--EYLASQKNRAKLITRIRPDEPVVADNVILESNVVKIVRP 282
           I+   H+ +P+H    + E  E L+  K +  ++ RI+  +PV     +    VVKI+R 
Sbjct: 137 INITEHELVPEHVVMTVEEKQELLSRYKLKENMLMRIQAGDPVARYFGLKRGQVVKIIRS 196

Query: 283 SK 288
           S+
Sbjct: 197 SE 198


>AE013599-1201|AAF58728.1|  210|Drosophila melanogaster CG11979-PA
           protein.
          Length = 210

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
 Frame = +1

Query: 109 IDSARHKQIPKHHDYVLNE--EYLASQKNRAKLITRIRPDEPVVADNVILESNVVKIVRP 282
           I+   H+ +P+H    + E  E L+  K +  ++ RI+  +PV     +    VVKI+R 
Sbjct: 137 INITEHELVPEHVVMTVEEKQELLSRYKLKENMLMRIQAGDPVARYFGLKRGQVVKIIRS 196

Query: 283 SK 288
           S+
Sbjct: 197 SE 198


>AE014298-877|AAF46154.1| 1543|Drosophila melanogaster CG15894-PA
            protein.
          Length = 1543

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = -2

Query: 105  SVVSEAVSWGGERGRRHDDYERDVRV 28
            S V+ AV  GGE GRRH ++ R+V V
Sbjct: 1134 SSVTTAVPAGGEAGRRHHNFPRNVCV 1159


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,631,508
Number of Sequences: 53049
Number of extensions: 562481
Number of successful extensions: 1289
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1289
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4229643912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)