Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_P07
         (842 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119122-1|AAM50982.1|  304|Drosophila melanogaster RE24790p pro...    66   8e-11
AE014298-712|AAF46012.2|  285|Drosophila melanogaster CG15786-PA...    66   8e-11
BT011531-1|AAS15667.1|  233|Drosophila melanogaster LP24064p pro...    57   3e-08
AE014297-2774|AAF55754.1|  233|Drosophila melanogaster CG4362-PA...    57   3e-08
AY118980-1|AAM50840.1|  219|Drosophila melanogaster LP01886p pro...    51   2e-06
AE014297-2773|AAF55752.2|  219|Drosophila melanogaster CG4367-PA...    51   2e-06

>AY119122-1|AAM50982.1|  304|Drosophila melanogaster RE24790p
           protein.
          Length = 304

 Score = 65.7 bits (153), Expect = 8e-11
 Identities = 28/62 (45%), Positives = 41/62 (66%)
 Frame = +2

Query: 200 TGSVIVKMNILWCWLVVIALSWGRASGHGRLIEPPSRASAWRFGFDTPHNYNDHELFCGG 379
           T  V++ + +L    VV+        GHGRL++PP+R + WRFG+  P NYND+ELFCGG
Sbjct: 29  TMGVLLPVGVLG--FVVLMQLMASVRGHGRLMDPPARNAMWRFGYPNPVNYNDNELFCGG 86

Query: 380 FS 385
           ++
Sbjct: 87  YA 88



 Score = 37.9 bits (84), Expect = 0.017
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +1

Query: 400 KNDGKCGVCGDXWDASTPRAHXXGGXSRK 486
           +N G+CG+CGD +   +PR H  GG   K
Sbjct: 93  QNKGRCGICGDAYHVKSPRPHEAGGQYAK 121


>AE014298-712|AAF46012.2|  285|Drosophila melanogaster CG15786-PA
           protein.
          Length = 285

 Score = 65.7 bits (153), Expect = 8e-11
 Identities = 28/62 (45%), Positives = 41/62 (66%)
 Frame = +2

Query: 200 TGSVIVKMNILWCWLVVIALSWGRASGHGRLIEPPSRASAWRFGFDTPHNYNDHELFCGG 379
           T  V++ + +L    VV+        GHGRL++PP+R + WRFG+  P NYND+ELFCGG
Sbjct: 10  TMGVLLPVGVLG--FVVLMQLMASVRGHGRLMDPPARNAMWRFGYPNPVNYNDNELFCGG 67

Query: 380 FS 385
           ++
Sbjct: 68  YA 69



 Score = 37.9 bits (84), Expect = 0.017
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +1

Query: 400 KNDGKCGVCGDXWDASTPRAHXXGGXSRK 486
           +N G+CG+CGD +   +PR H  GG   K
Sbjct: 74  QNKGRCGICGDAYHVKSPRPHEAGGQYAK 102


>BT011531-1|AAS15667.1|  233|Drosophila melanogaster LP24064p
           protein.
          Length = 233

 Score = 57.2 bits (132), Expect = 3e-08
 Identities = 22/53 (41%), Positives = 33/53 (62%)
 Frame = +2

Query: 221 MNILWCWLVVIALSWGRASGHGRLIEPPSRASAWRFGFDTPHNYNDHELFCGG 379
           M  L    +++A+   +   HG ++ PPSR+S WR+    P N+ND+ELFCGG
Sbjct: 1   MKYLLSMTLLLAIGLQQIDAHGMMLSPPSRSSRWRYDGSAPQNWNDNELFCGG 53



 Score = 32.7 bits (71), Expect = 0.65
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +1

Query: 403 NDGKCGVCGDXWDASTPRAHXXGG 474
           N G+CG+CGD +  + PRA+  GG
Sbjct: 60  NGGRCGLCGDNFLDAQPRANEIGG 83


>AE014297-2774|AAF55754.1|  233|Drosophila melanogaster CG4362-PA
           protein.
          Length = 233

 Score = 57.2 bits (132), Expect = 3e-08
 Identities = 22/53 (41%), Positives = 33/53 (62%)
 Frame = +2

Query: 221 MNILWCWLVVIALSWGRASGHGRLIEPPSRASAWRFGFDTPHNYNDHELFCGG 379
           M  L    +++A+   +   HG ++ PPSR+S WR+    P N+ND+ELFCGG
Sbjct: 1   MKYLLSMTLLLAIGLQQIDAHGMMLSPPSRSSRWRYDGSAPQNWNDNELFCGG 53



 Score = 32.7 bits (71), Expect = 0.65
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +1

Query: 403 NDGKCGVCGDXWDASTPRAHXXGG 474
           N G+CG+CGD +  + PRA+  GG
Sbjct: 60  NGGRCGLCGDNFLDAQPRANEIGG 83


>AY118980-1|AAM50840.1|  219|Drosophila melanogaster LP01886p
           protein.
          Length = 219

 Score = 51.2 bits (117), Expect = 2e-06
 Identities = 18/39 (46%), Positives = 25/39 (64%)
 Frame = +2

Query: 266 GRASGHGRLIEPPSRASAWRFGFDTPHNYNDHELFCGGF 382
           G   GHG ++ P  R+S WR+    P NY+D+ L+CGGF
Sbjct: 8   GELEGHGMMLSPTGRSSRWRYDNSAPTNYDDNALYCGGF 46



 Score = 40.7 bits (91), Expect = 0.002
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = +1

Query: 400 KNDGKCGVCGDXWDASTPRAHXXGG 474
           +NDGKCG+CGD W    PR +  GG
Sbjct: 51  ENDGKCGLCGDDWSLEQPRPNELGG 75


>AE014297-2773|AAF55752.2|  219|Drosophila melanogaster CG4367-PA
           protein.
          Length = 219

 Score = 51.2 bits (117), Expect = 2e-06
 Identities = 18/39 (46%), Positives = 25/39 (64%)
 Frame = +2

Query: 266 GRASGHGRLIEPPSRASAWRFGFDTPHNYNDHELFCGGF 382
           G   GHG ++ P  R+S WR+    P NY+D+ L+CGGF
Sbjct: 8   GELEGHGMMLSPTGRSSRWRYDNSAPTNYDDNALYCGGF 46



 Score = 40.7 bits (91), Expect = 0.002
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = +1

Query: 400 KNDGKCGVCGDXWDASTPRAHXXGG 474
           +NDGKCG+CGD W    PR +  GG
Sbjct: 51  ENDGKCGLCGDDWSLEQPRPNELGG 75


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,206,242
Number of Sequences: 53049
Number of extensions: 597130
Number of successful extensions: 1086
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4024321392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)